Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p14930 Brassica napus HOM05D008316 ORTHO05D014956 2.4e-121 439.1 270 100.0
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 3.3e-70 269.2 360 59.7
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 1.0e-66 257.7 367 56.7
BolC8t48343H Brassica oleracea HOM05D008316 ORTHO05D014956 1.1e-57 227.6 318 61.3
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 1.7e-53 213.8 373 52.8
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 1.0e-50 204.5 397 49.4
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 7.2e-49 198.4 424 44.3
BolC6t35516H Brassica oleracea HOM05D008316 ORTHO05D024101 7.5e-38 161.8 191 59.7
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 4.9e-37 159.1 388 42.3
C07p22540 Brassica napus HOM05D008316 ORTHO05D018797 4.9e-37 159.1 240 56.2
C08p07210 Brassica napus HOM05D008316 ORTHO05D018797 4.9e-37 159.1 281 56.9
BcaC02g08561 Brassica carinata HOM05D008316 ORTHO05D014956 3.5e-35 152.9 86 89.5
BolC4t26823H Brassica oleracea HOM05D008316 ORTHO05D014956 3.5e-35 152.9 86 89.5
C06p22750 Brassica napus HOM05D008316 ORTHO05D018797 1.0e-34 151.4 258 52.3
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 8.6e-34 148.3 158 55.7
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 1.5e-33 147.5 297 43.4
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 1.5e-33 147.5 149 56.4
BraA08t32672Z Brassica rapa HOM05D008316 ORTHO05D014956 1.2e-32 144.4 79 89.9
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 1.6e-32 144.1 270 39.3
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 4.7e-32 142.5 173 58.4
C01p42550 Brassica napus HOM05D008316 ORTHO05D014956 1.8e-31 140.6 268 45.9
BolC8t47566H Brassica oleracea HOM05D008316 ORTHO05D018797 2.6e-30 136.7 230 54.3
A09p33190 Brassica napus HOM05D008316 ORTHO05D018797 7.0e-28 128.6 271 44.6
C09p42580 Brassica napus HOM05D008316 ORTHO05D024101 2.7e-27 126.7 224 51.8
BraA09t38862Z Brassica rapa HOM05D008316 ORTHO05D018797 3.5e-27 126.3 271 44.3
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 8.6e-26 121.7 340 36.2
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 1.1e-23 114.8 88 65.9
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 6.8e-23 112.1 92 73.9
BcaC03g14204 Brassica carinata HOM05D008316 ORTHO05D021631 3.4e-22 109.8 108 65.7
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 5.8e-22 109.0 75 70.7
BolC9t56605H Brassica oleracea HOM05D008316 ORTHO05D042521 2.2e-21 107.1 244 46.3
C04p52510 Brassica napus HOM05D008316 ORTHO05D024101 2.9e-21 106.7 101 65.3
BraA09t38753Z Brassica rapa HOM05D008825 ORTHO05D013031 1.4e-20 104.4 121 51.2
BcaB02g11054 Brassica carinata HOM05D009532 ORTHO05D005130 1.6e-19 100.9 84 53.6
BolC4t26072H Brassica oleracea HOM05D008316 ORTHO05D018797 2.1e-19 100.5 276 43.1
C06p43740 Brassica napus HOM05D008316 ORTHO05D097270 1.7e-18 97.4 238 44.5
C09p37750 Brassica napus HOM05D008316 ORTHO05D042521 2.3e-18 97.1 236 45.3
BcaC04g20884 Brassica carinata HOM05D009532 ORTHO05D013511 5.1e-18 95.9 84 52.4
BcaC07g39489 Brassica carinata HOM05D009532 ORTHO05D013511 5.1e-18 95.9 84 52.4
BcaC08g43125 Brassica carinata HOM05D009532 ORTHO05D013511 1.5e-17 94.4 84 51.2
BolC7t42789H Brassica oleracea HOM05D008316 ORTHO05D018797 1.6e-16 90.9 220 45.9
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 4.7e-16 89.4 254 33.9
A07p06500 Brassica napus HOM05D008825 ORTHO05D013031 4.7e-16 89.4 103 50.5
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 2.3e-15 87.0 84 52.4
C06p05550 Brassica napus HOM05D009532 ORTHO05D013511 8.9e-15 85.1 75 52.0
BolC5t32294H Brassica oleracea HOM05D009532 ORTHO05D013511 2.0e-14 84.0 75 50.7
BcaB06g28000 Brassica carinata HOM05D009532 ORTHO05D005130 5.8e-14 82.4 74 48.6
BraA06t24764Z Brassica rapa HOM05D009532 ORTHO05D013511 5.8e-14 82.4 75 49.3
C08p25340 Brassica napus HOM05D009532 ORTHO05D013511 7.6e-14 82.0 75 49.3
BolC8t50155H Brassica oleracea HOM05D009532 ORTHO05D013511 7.6e-14 82.0 75 49.3
C09p38200 Brassica napus HOM05D009532 ORTHO05D013511 2.9e-13 80.1 167 32.9
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 6.4e-13 79.0 77 49.4
A08p07770 Brassica napus HOM05D009532 ORTHO05D013511 6.4e-13 79.0 168 31.5
BolC8t48188H Brassica oleracea HOM05D009532 ORTHO05D013511 1.1e-12 78.2 168 31.5
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 1.4e-12 77.8 77 44.2
C06p04000 Brassica napus HOM05D009532 ORTHO05D013511 1.4e-12 77.8 168 31.5
BolC9t56660H Brassica oleracea HOM05D009532 ORTHO05D013511 3.2e-12 76.6 167 31.7
BcaB03g15454 Brassica carinata HOM05D008316 ORTHO05D024101 1.2e-11 74.7 88 59.1
BolC9t56606H Brassica oleracea HOM05D008316 ORTHO05D014956 7.8e-11 72.0 37 89.2
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 1.0e-10 71.6 77 45.5
BolC7t42790H Brassica oleracea HOM05D008316 ORTHO05D014956 1.3e-10 71.2 36 91.7
BcaC07g37797 Brassica carinata HOM05D009532 ORTHO05D013511 2.3e-10 70.5 158 30.4
BraA01t01424Z Brassica rapa HOM05D008316 ORTHO05D014956 3.0e-10 70.1 36 91.7
BcaC04g20527 Brassica carinata HOM05D041675 ORTHO05D039102 1.9e-09 67.4 40 90.0
BcaC01g05681 Brassica carinata HOM05D009532 ORTHO05D013511 1.6e-08 64.3 75 42.7
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 3.1e-07 60.1 84 35.7
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.1e-07 60.1 86 33.7
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 8.9e-07 58.5 80 40.0
A03p68740 Brassica napus HOM05D009532 ORTHO05D013511 2.0e-06 57.4 49 53.1
BraSC39t46189Z Brassica rapa HOM05D009532 ORTHO05D013511 2.0e-06 57.4 49 53.1
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 2.0e-06 57.4 80 38.8
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 2.6e-06 57.0 77 41.6
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.4e-06 56.6 84 34.5


User provided reference genes

Program Settings