Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 7.4e-76 287.3 168 100.0
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 6.9e-74 280.8 149 99.3
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 8.4e-72 273.9 150 98.0
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 8.4e-72 273.9 150 98.0
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 1.6e-70 269.6 150 95.3
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 1.6e-70 269.6 150 95.3
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 2.7e-70 268.9 150 96.0
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 2.7e-70 268.9 150 96.0
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 3.5e-70 268.5 150 96.7
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 3.5e-70 268.5 150 96.7
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 4.6e-70 268.1 150 96.0
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 7.9e-70 267.3 150 94.7
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 7.9e-70 267.3 150 94.7
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 1.0e-69 266.9 150 96.0
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 1.3e-69 266.5 150 94.7
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 1.8e-69 266.2 150 94.7
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 1.8e-69 266.2 150 96.0
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 1.8e-69 266.2 150 94.7
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 5.1e-69 264.6 150 94.0
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 6.7e-69 264.2 150 93.3
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 1.1e-68 263.5 151 94.0
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 1.1e-68 263.5 151 94.0
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 4.3e-68 261.5 150 92.7
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 1.6e-67 259.6 148 92.6
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 1.6e-67 259.6 148 92.6
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 2.6e-65 252.3 150 92.7
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 2.0e-57 226.1 153 81.7
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 2.0e-57 226.1 153 81.7
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 7.7e-49 197.6 138 78.3
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 2.8e-43 179.1 87 96.6
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 5.3e-42 174.9 87 95.4
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.8e-29 133.3 143 53.1
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 4.4e-28 128.6 149 51.0
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.7e-27 126.7 149 50.3
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 2.8e-27 125.9 146 49.3
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 3.1e-26 122.5 146 48.6
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 2.0e-25 119.8 146 47.9
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 1.0e-24 117.5 146 46.6
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 1.7e-24 116.7 146 45.2
BolC2t07398H Brassica oleracea HOM05D007865 ORTHO05D010123 2.9e-24 115.9 97 76.3
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 7.2e-23 111.3 146 44.5
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 9.4e-23 110.9 145 44.1
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 9.4e-23 110.9 145 44.1
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 1.0e-21 107.5 107 51.4
CARHR273100 Cardamine hirsuta HOM05D007865 ORTHO05D010123 1.8e-21 106.7 172 42.4
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 3.0e-21 105.9 145 42.8
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 4.0e-21 105.5 87 59.8
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 2.6e-20 102.8 106 50.9
Carub.0008s1968 Capsella rubella HOM05D007865 ORTHO05D010123 2.4e-18 96.3 138 40.6
Carub.0008s1992 Capsella rubella HOM05D007865 ORTHO05D010123 2.4e-18 96.3 138 40.6
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 9.2e-18 94.4 89 52.8
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.6e-17 93.6 87 54.0
BolC9t57975H Brassica oleracea HOM05D007865 ORTHO05D010123 5.9e-17 91.7 146 41.1
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 3.3e-15 85.9 56 71.4
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 4.3e-15 85.5 126 38.9
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 1.6e-14 83.6 86 51.2
Carub.0006s1626 Capsella rubella HOM05D007865 ORTHO05D010123 3.6e-14 82.4 116 43.1
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 1.4e-13 80.5 70 55.7
BcaB05g22499 Brassica carinata HOM05D007865 ORTHO05D010123 1.8e-13 80.1 54 79.6
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 3.0e-13 79.3 87 49.4
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 4.0e-13 79.0 47 78.7
BcaB03g13835 Brassica carinata HOM05D007865 ORTHO05D010123 2.0e-12 76.6 68 58.8
BraA10t43701Z Brassica rapa HOM05D007865 ORTHO05D010123 3.4e-12 75.9 144 38.9
Thhalv10009374m.g Eutrema salsugineum HOM05D009272 ORTHO05D010513 3.4e-12 75.9 103 38.8
BcaB02g07852 Brassica carinata HOM05D009350 ORTHO05D010513 2.4e-10 69.7 116 34.5
Carub.0001s0263 Capsella rubella HOM05D007865 ORTHO05D010513 3.2e-10 69.3 102 36.3
C05p01970 Brassica napus HOM05D009272 ORTHO05D015471 5.4e-10 68.6 114 37.7
C05p02270 Brassica napus HOM05D009272 ORTHO05D015471 5.4e-10 68.6 114 37.7
BolC5t29005H Brassica oleracea HOM05D009272 ORTHO05D015471 2.7e-09 66.2 114 36.8
BcaC05g24525 Brassica carinata HOM05D009272 ORTHO05D015471 3.5e-09 65.9 114 36.8
BolC5t28976H Brassica oleracea HOM05D009272 ORTHO05D015471 3.5e-09 65.9 114 36.8
CARHR289550 Cardamine hirsuta HOM05D009350 ORTHO05D010513 3.5e-09 65.9 106 37.7
THA.LOC104813384 Tarenaya hassleriana HOM05D007865 ORTHO05D010123 3.5e-09 65.9 91 36.3
AL6G29200 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.9e-09 65.1 114 37.7
Thhalv10017056m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.8e-09 64.7 119 37.8
Thhalv10017700m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.8e-09 64.7 119 37.8
Thhalv10017733m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 7.8e-09 64.7 119 37.8
A10p02020 Brassica napus HOM05D009272 ORTHO05D015471 1.0e-08 64.3 116 37.9
A10p02460 Brassica napus HOM05D009272 ORTHO05D015471 1.0e-08 64.3 116 37.9
BraA10t42475Z Brassica rapa HOM05D009272 ORTHO05D015471 1.0e-08 64.3 116 37.9
CARHR249930 Cardamine hirsuta HOM05D009056 ORTHO05D011508 1.0e-08 64.3 113 36.3
AT5G18300 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 1.3e-08 63.9 114 36.0
C06p16700 Brassica napus HOM05D009350 ORTHO05D010513 2.3e-08 63.2 117 33.3
BolC6t36869H Brassica oleracea HOM05D009350 ORTHO05D010513 2.3e-08 63.2 117 33.3
AT1G03490 Arabidopsis thaliana HOM05D009272 ORTHO05D010513 3.9e-08 62.4 84 39.3
C06p16850 Brassica napus HOM05D009350 ORTHO05D010513 3.9e-08 62.4 117 33.3
BolC6t36881H Brassica oleracea HOM05D009350 ORTHO05D010513 3.9e-08 62.4 117 33.3
BcaC02g12724 Brassica carinata HOM05D009272 ORTHO05D010513 5.0e-08 62.0 106 34.0
BcaC08g44261 Brassica carinata HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BcaC08g44264 Brassica carinata HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BcaC08g44265 Brassica carinata HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BcaC08g44266 Brassica carinata HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BcaC08g44267 Brassica carinata HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
C04p02040 Brassica napus HOM05D009272 ORTHO05D010513 5.0e-08 62.0 106 34.0
C06p16770 Brassica napus HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
C06p16790 Brassica napus HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
C06p16820 Brassica napus HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BolC4t21854H Brassica oleracea HOM05D009272 ORTHO05D010513 5.0e-08 62.0 106 34.0
BolC6t36876H Brassica oleracea HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BolC6t36877H Brassica oleracea HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BolC6t36880H Brassica oleracea HOM05D009350 ORTHO05D010513 5.0e-08 62.0 117 33.3
BcaB02g06921 Brassica carinata HOM05D009272 ORTHO05D015471 6.6e-08 61.6 113 35.4
BcaB02g06922 Brassica carinata HOM05D009272 ORTHO05D015471 6.6e-08 61.6 113 35.4
BcaB02g06923 Brassica carinata HOM05D009272 ORTHO05D010123 6.6e-08 61.6 113 35.4
BcaB02g06924 Brassica carinata HOM05D009272 ORTHO05D010513 6.6e-08 61.6 113 35.4
BcaB02g06925 Brassica carinata HOM05D009272 ORTHO05D015471 6.6e-08 61.6 113 35.4
A05p16790 Brassica napus HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
A05p16800 Brassica napus HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
A05p16820 Brassica napus HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
A05p16860 Brassica napus HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
A05p16870 Brassica napus HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
BraA05t20583Z Brassica rapa HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
BraA05t20584Z Brassica rapa HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
BraA05t20585Z Brassica rapa HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
BraA05t20590Z Brassica rapa HOM05D009350 ORTHO05D010513 6.6e-08 61.6 117 33.3
AL1G12990 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 8.6e-08 61.2 102 35.3
AL1G13550 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 8.6e-08 61.2 102 35.3
Carub.0006s3546 Capsella rubella HOM05D009056 ORTHO05D011508 1.1e-07 60.8 106 35.8
Thhalv10015280m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.1e-07 60.8 115 36.5
C04p02100 Brassica napus HOM05D009272 ORTHO05D010513 1.5e-07 60.5 106 33.0
BolC4t21858H Brassica oleracea HOM05D009272 ORTHO05D010513 1.5e-07 60.5 106 33.0
Thhalv10029188m.g Eutrema salsugineum HOM05D009056 ORTHO05D011508 3.3e-07 59.3 82 37.8
Sp6g01800 Schrenkiella parvula HOM05D009056 ORTHO05D011508 5.6e-07 58.5 82 35.4
THA.LOC104818129 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 5.6e-07 58.5 92 31.5
BcaC02g12720 Brassica carinata HOM05D009272 ORTHO05D010513 7.3e-07 58.2 106 32.1
THA.LOC104806001 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 7.3e-07 58.2 92 31.5
THA.LOC104806002 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 7.3e-07 58.2 92 31.5
A05p01760 Brassica napus HOM05D009272 ORTHO05D010513 1.6e-06 57.0 106 33.0
A05p01800 Brassica napus HOM05D009272 ORTHO05D010513 1.6e-06 57.0 106 33.0
BraA05t19173Z Brassica rapa HOM05D009272 ORTHO05D010513 1.6e-06 57.0 106 33.0
BraA05t19178Z Brassica rapa HOM05D009272 ORTHO05D010513 1.6e-06 57.0 106 33.0
BcaB01g03533 Brassica carinata HOM05D009272 ORTHO05D010513 2.1e-06 56.6 90 34.4
AL6G29530 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 4.7e-06 55.5 103 35.9


User provided reference genes

Program Settings