Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p12900 Brassica napus HOM05D007865 ORTHO05D010123 3.2e-96 355.1 184 100.0
BcaC03g14053 Brassica carinata HOM05D007865 ORTHO05D010123 1.6e-87 326.2 177 97.7
BolC2t07395H Brassica oleracea HOM05D007865 ORTHO05D010123 1.6e-87 326.2 177 97.7
BcaC03g14047 Brassica carinata HOM05D007865 ORTHO05D010123 5.0e-86 321.2 177 96.0
BolC2t07384H Brassica oleracea HOM05D007865 ORTHO05D010123 5.0e-86 321.2 177 96.0
C02p12860 Brassica napus HOM05D007865 ORTHO05D010123 4.3e-85 318.2 177 95.5
A02p07380 Brassica napus HOM05D007865 ORTHO05D010123 2.1e-84 315.8 177 93.8
BraA02t05817Z Brassica rapa HOM05D007865 ORTHO05D010123 2.1e-84 315.8 177 93.8
BcaC03g14044 Brassica carinata HOM05D007865 ORTHO05D010123 3.6e-84 315.1 177 94.9
BolC2t07386H Brassica oleracea HOM05D007865 ORTHO05D010123 3.6e-84 315.1 177 94.9
BraA02t05802Z Brassica rapa HOM05D007865 ORTHO05D010123 3.6e-84 315.1 177 93.8
BcaC03g14042 Brassica carinata HOM05D007865 ORTHO05D010123 4.7e-84 314.7 177 93.8
BcaC03g14051 Brassica carinata HOM05D007865 ORTHO05D010123 4.7e-84 314.7 177 94.9
BolC2t07382H Brassica oleracea HOM05D007865 ORTHO05D010123 4.7e-84 314.7 177 93.8
A02p07230 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-83 313.5 177 93.2
A02p07240 Brassica napus HOM05D007865 ORTHO05D010123 1.1e-83 313.5 177 93.2
BraA02t05804Z Brassica rapa HOM05D007865 ORTHO05D010123 1.4e-83 313.2 177 93.2
C02p12890 Brassica napus HOM05D007865 ORTHO05D010123 5.2e-83 311.2 181 93.4
A02p07250 Brassica napus HOM05D007865 ORTHO05D010123 8.9e-83 310.5 177 92.1
BraA02t05803Z Brassica rapa HOM05D007865 ORTHO05D010123 5.8e-82 307.8 177 91.5
BolC2t07361H Brassica oleracea HOM05D007865 ORTHO05D010123 7.5e-82 307.4 178 92.1
BcaC03g14023 Brassica carinata HOM05D007865 ORTHO05D010123 9.8e-82 307.0 178 92.1
C02p12920 Brassica napus HOM05D007865 ORTHO05D010123 8.3e-81 303.9 177 92.7
C02p12910 Brassica napus HOM05D007865 ORTHO05D010123 2.2e-73 279.3 149 99.3
BcaB05g22473 Brassica carinata HOM05D007865 ORTHO05D010123 6.0e-71 271.2 181 82.3
BcaB05g22474 Brassica carinata HOM05D007865 ORTHO05D010123 6.0e-71 271.2 181 82.3
BcaC03g14024 Brassica carinata HOM05D007865 ORTHO05D010123 1.5e-66 256.5 148 91.9
BolC2t07362H Brassica oleracea HOM05D007865 ORTHO05D010123 1.5e-66 256.5 148 91.9
BolC2t07397H Brassica oleracea HOM05D007865 ORTHO05D010123 9.9e-58 227.3 114 95.6
C02p12610 Brassica napus HOM05D007865 ORTHO05D010123 3.8e-57 225.3 114 93.9
BcaB05g22471 Brassica carinata HOM05D007865 ORTHO05D010123 4.2e-48 195.3 138 77.5
Thhalv10015750m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.1e-35 154.1 176 52.8
Thhalv10015599m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 4.1e-35 152.1 173 53.2
C09p51140 Brassica napus HOM05D007865 ORTHO05D010123 1.0e-33 147.5 174 50.0
BcaB08g36307 Brassica carinata HOM05D007865 ORTHO05D010123 2.9e-33 146.0 177 48.6
A10p15310 Brassica napus HOM05D007865 ORTHO05D010123 8.4e-33 144.4 174 49.4
BolC9t57977H Brassica oleracea HOM05D007865 ORTHO05D010123 1.1e-32 144.1 174 48.9
BcaB01g02171 Brassica carinata HOM05D007865 ORTHO05D010123 2.5e-32 142.9 177 48.6
A10p15300 Brassica napus HOM05D007865 ORTHO05D010123 4.6e-31 138.7 174 46.6
BraA10t43702Z Brassica rapa HOM05D007865 ORTHO05D010123 4.6e-31 138.7 174 46.6
AL4G20480 Arabidopsis lyrata HOM05D014137 ORTHO05D010123 1.8e-30 136.7 137 53.3
AL4G20500 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.1e-30 135.2 175 45.7
C09p51150 Brassica napus HOM05D007865 ORTHO05D010123 5.7e-29 131.7 115 60.0
AL8G35160 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.3e-28 130.6 136 52.2
Thhalv10015954m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 2.8e-28 129.4 157 49.0
Thhalv10015349m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 4.8e-28 128.6 173 45.7
BcaB05g22499 Brassica carinata HOM05D007865 ORTHO05D010123 1.2e-26 124.0 82 80.5
AL8G35690 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.5e-26 123.6 119 53.8
CARHR273100 Cardamine hirsuta HOM05D007865 ORTHO05D010123 2.0e-26 123.2 183 46.4
BolC9t57975H Brassica oleracea HOM05D007865 ORTHO05D010123 1.9e-24 116.7 174 43.7
Carub.0008s1968 Capsella rubella HOM05D007865 ORTHO05D010123 1.2e-23 114.0 168 41.1
Carub.0008s1992 Capsella rubella HOM05D007865 ORTHO05D010123 1.2e-23 114.0 168 41.1
BolC2t07398H Brassica oleracea HOM05D007865 ORTHO05D010123 1.6e-23 113.6 97 75.3
BcaB03g13835 Brassica carinata HOM05D007865 ORTHO05D010123 3.9e-22 109.0 98 62.2
Thhalv10028104m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 3.3e-21 105.9 118 49.2
Thhalv10028345m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 8.2e-20 101.3 117 50.4
BraA10t43701Z Brassica rapa HOM05D007865 ORTHO05D010123 1.4e-19 100.5 172 41.9
AL8G35420 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 3.8e-17 92.4 171 35.1
SpUn1022_0010 Schrenkiella parvula HOM05D007865 ORTHO05D010123 3.6e-15 85.9 56 71.4
AT3G46565 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 3.0e-14 82.8 86 51.2
AT1G35890 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 1.5e-13 80.5 70 55.7
Carub.0006s1626 Capsella rubella HOM05D007865 ORTHO05D010123 2.0e-13 80.1 123 41.5
BcaB05g22472 Brassica carinata HOM05D007865 ORTHO05D010123 1.7e-12 77.0 47 76.6
Thhalv10009374m.g Eutrema salsugineum HOM05D009272 ORTHO05D010513 1.1e-11 74.3 111 37.8
BcaB02g07852 Brassica carinata HOM05D009350 ORTHO05D010513 4.1e-11 72.4 146 31.5
THA.LOC104813384 Tarenaya hassleriana HOM05D007865 ORTHO05D010123 4.1e-11 72.4 119 32.8
Carub.0001s0263 Capsella rubella HOM05D007865 ORTHO05D010513 7.7e-10 68.2 114 35.1
C05p01970 Brassica napus HOM05D009272 ORTHO05D015471 1.7e-09 67.0 122 36.1
C05p02270 Brassica napus HOM05D009272 ORTHO05D015471 1.7e-09 67.0 122 36.1
C06p16700 Brassica napus HOM05D009350 ORTHO05D010513 5.0e-09 65.5 147 30.6
BolC6t36869H Brassica oleracea HOM05D009350 ORTHO05D010513 5.0e-09 65.5 147 30.6
CARHR289550 Cardamine hirsuta HOM05D009350 ORTHO05D010513 5.0e-09 65.5 119 36.1
A05p16790 Brassica napus HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
A05p16800 Brassica napus HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
A05p16820 Brassica napus HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
A05p16860 Brassica napus HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
A05p16870 Brassica napus HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
C06p16850 Brassica napus HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
BolC5t29005H Brassica oleracea HOM05D009272 ORTHO05D015471 8.5e-09 64.7 122 35.2
BolC6t36881H Brassica oleracea HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
BraA05t20583Z Brassica rapa HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
BraA05t20584Z Brassica rapa HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
BraA05t20585Z Brassica rapa HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
BraA05t20590Z Brassica rapa HOM05D009350 ORTHO05D010513 8.5e-09 64.7 147 30.6
CARHR249930 Cardamine hirsuta HOM05D009056 ORTHO05D011508 8.5e-09 64.7 143 32.2
BcaC05g24525 Brassica carinata HOM05D009272 ORTHO05D015471 1.1e-08 64.3 122 35.2
BcaC08g44261 Brassica carinata HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
BcaC08g44264 Brassica carinata HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
BcaC08g44265 Brassica carinata HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
BcaC08g44266 Brassica carinata HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
BcaC08g44267 Brassica carinata HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
C06p16770 Brassica napus HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
C06p16790 Brassica napus HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
C06p16820 Brassica napus HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
BolC5t28976H Brassica oleracea HOM05D009272 ORTHO05D015471 1.1e-08 64.3 122 35.2
BolC6t36876H Brassica oleracea HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
BolC6t36877H Brassica oleracea HOM05D009350 ORTHO05D010513 1.1e-08 64.3 147 30.6
Thhalv10017056m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 1.1e-08 64.3 122 37.7
Thhalv10017700m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 1.1e-08 64.3 122 37.7
Thhalv10017733m.g Eutrema salsugineum HOM05D007865 ORTHO05D010513 1.1e-08 64.3 122 37.7
AL6G29200 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 1.9e-08 63.5 121 37.2
BcaB02g06921 Brassica carinata HOM05D009272 ORTHO05D015471 1.9e-08 63.5 129 34.1
BcaB02g06922 Brassica carinata HOM05D009272 ORTHO05D015471 1.9e-08 63.5 129 34.1
BcaB02g06923 Brassica carinata HOM05D009272 ORTHO05D010123 1.9e-08 63.5 129 34.1
BcaB02g06925 Brassica carinata HOM05D009272 ORTHO05D015471 1.9e-08 63.5 129 34.1
AT1G03490 Arabidopsis thaliana HOM05D009272 ORTHO05D010513 4.2e-08 62.4 84 39.3
BraA10t42475Z Brassica rapa HOM05D009272 ORTHO05D015471 4.2e-08 62.4 123 36.6
A10p02020 Brassica napus HOM05D009272 ORTHO05D015471 5.5e-08 62.0 123 36.6
A10p02460 Brassica napus HOM05D009272 ORTHO05D015471 5.5e-08 62.0 123 36.6
Carub.0006s3546 Capsella rubella HOM05D009056 ORTHO05D011508 5.5e-08 62.0 136 30.9
AT5G18300 Arabidopsis thaliana HOM05D007865 ORTHO05D010123 7.2e-08 61.6 122 35.2
BcaC02g12724 Brassica carinata HOM05D009272 ORTHO05D010513 7.2e-08 61.6 109 33.9
C04p02040 Brassica napus HOM05D009272 ORTHO05D010513 7.2e-08 61.6 109 33.9
BolC4t21854H Brassica oleracea HOM05D009272 ORTHO05D010513 7.2e-08 61.6 109 33.9
BolC6t36880H Brassica oleracea HOM05D009350 ORTHO05D010513 7.2e-08 61.6 152 29.6
AL1G12990 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 9.4e-08 61.2 102 35.3
AL1G13550 Arabidopsis lyrata HOM05D009272 ORTHO05D010513 9.4e-08 61.2 102 35.3
BcaB02g06924 Brassica carinata HOM05D009272 ORTHO05D010513 9.4e-08 61.2 113 35.4
Thhalv10029188m.g Eutrema salsugineum HOM05D009056 ORTHO05D011508 1.6e-07 60.5 112 33.0
C04p02100 Brassica napus HOM05D009272 ORTHO05D010513 2.1e-07 60.1 109 33.0
BolC4t21858H Brassica oleracea HOM05D009272 ORTHO05D010513 2.1e-07 60.1 109 33.0
BcaB01g03533 Brassica carinata HOM05D009272 ORTHO05D010513 3.6e-07 59.3 100 35.0
CiPaw.01G116900 Carya illinoinensis HOM05D007865 ORTHO05D011589 6.1e-07 58.5 147 31.3
BcaC02g12720 Brassica carinata HOM05D009272 ORTHO05D010513 8.0e-07 58.2 113 31.9
BcaC04g24060 Brassica carinata HOM05D009056 ORTHO05D011508 8.0e-07 58.2 123 29.3
C09p01500 Brassica napus HOM05D009056 ORTHO05D011508 8.0e-07 58.2 123 29.3
BolC2t07399H Brassica oleracea HOM05D007865 ORTHO05D010123 8.0e-07 58.2 29 86.2
Sp6g01800 Schrenkiella parvula HOM05D009056 ORTHO05D011508 8.0e-07 58.2 112 33.0
THA.LOC104818129 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 8.0e-07 58.2 93 31.2
A05p01760 Brassica napus HOM05D009272 ORTHO05D010513 1.0e-06 57.8 109 33.9
A05p01800 Brassica napus HOM05D009272 ORTHO05D010513 1.0e-06 57.8 109 33.9
BraA05t19173Z Brassica rapa HOM05D009272 ORTHO05D010513 1.0e-06 57.8 109 33.9
BraA05t19178Z Brassica rapa HOM05D009272 ORTHO05D010513 1.0e-06 57.8 109 33.9
THA.LOC104806001 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 1.0e-06 57.8 93 31.2
THA.LOC104806002 Tarenaya hassleriana HOM05D007865 ORTHO05D010513 1.0e-06 57.8 93 31.2
C09p01340 Brassica napus HOM05D009056 ORTHO05D011508 1.4e-06 57.4 115 31.3
Thhalv10015280m.g Eutrema salsugineum HOM05D007865 ORTHO05D010123 1.4e-06 57.4 133 33.8
BraA09t35794Z Brassica rapa HOM05D009056 ORTHO05D011508 1.8e-06 57.0 116 33.6
Carub.0001s0160 Capsella rubella HOM05D009350 ORTHO05D010513 2.3e-06 56.6 136 32.4
AL6G29530 Arabidopsis lyrata HOM05D007865 ORTHO05D010123 5.2e-06 55.5 103 35.9
A09p01400 Brassica napus HOM05D009056 ORTHO05D011508 8.8e-06 54.7 124 30.6
BraA09t35804Z Brassica rapa HOM05D009056 ORTHO05D011508 8.8e-06 54.7 124 30.6


User provided reference genes

Program Settings