Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 9.3e-161 570.1 274 100.0
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 2.3e-159 565.5 274 98.5
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 8.7e-159 563.5 274 98.5
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 2.1e-141 505.8 275 89.1
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 6.1e-136 487.6 275 87.6
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 8.8e-127 457.2 274 82.1
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 1.5e-123 446.4 280 79.3
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 1.4e-119 433.3 285 76.1
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 1.5e-118 429.9 275 76.4
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 2.6e-118 429.1 276 76.1
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 3.5e-115 418.7 270 76.3
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 5.5e-113 411.4 258 76.7
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 1.1e-108 397.1 275 74.2
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 2.4e-108 396.0 272 72.4
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 4.2e-105 385.2 273 70.3
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 1.6e-104 383.3 273 70.0
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 1.6e-104 383.3 273 70.0
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 1.6e-104 383.3 273 70.0
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 2.1e-104 382.9 283 71.0
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 3.4e-102 375.6 283 70.0
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 1.1e-89 334.0 283 63.6
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 2.9e-85 319.3 297 60.9
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 6.4e-85 318.2 276 62.3
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 4.9e-69 265.4 288 53.1
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 3.2e-68 262.7 285 53.3
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 7.1e-68 261.5 292 52.4
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 4.3e-65 252.3 278 51.4
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 5.6e-65 251.9 276 51.4
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 5.6e-65 251.9 280 53.6
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 7.3e-65 251.5 276 53.6
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 1.6e-64 250.4 280 50.0
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 3.6e-64 249.2 282 52.1
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 2.9e-61 239.6 277 50.2
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 2.9e-61 239.6 277 50.2
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 1.2e-59 234.2 281 50.5
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 7.8e-59 231.5 284 47.9
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.7e-58 230.3 311 47.3
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.2e-54 217.6 285 47.7
BcaC03g13578 Brassica carinata HOM05D003715 ORTHO05D003958 2.3e-50 203.4 94 100.0
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 7.6e-46 188.3 270 43.7
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.4e-44 184.1 288 43.8
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 9.3e-44 181.4 231 46.3
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 1.2e-43 181.0 295 40.0
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 4.6e-43 179.1 297 38.4
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.0e-42 177.9 286 43.0
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 1.1e-41 174.5 313 39.0
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 1.1e-41 174.5 313 39.0
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.8e-40 169.9 314 39.8
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 9.0e-39 164.9 315 41.0
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 2.6e-38 163.3 306 39.2
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 3.4e-38 162.9 302 39.1
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 9.9e-38 161.4 297 36.0
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 1.4e-36 157.5 311 37.6
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.8e-34 150.6 310 36.1
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 1.5e-33 147.5 295 38.0
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 1.9e-33 147.1 312 37.8
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 3.3e-33 146.4 311 37.3
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.3e-33 146.4 289 36.3
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.6e-32 144.1 309 33.7
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 2.1e-32 143.7 290 34.5
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 2.1e-32 143.7 286 36.4
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 2.8e-32 143.3 287 36.6
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 3.7e-32 142.9 313 36.4
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 4.8e-32 142.5 278 37.4
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 4.8e-32 142.5 298 36.6
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 8.2e-32 141.7 287 36.6
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 1.8e-31 140.6 272 36.4
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 2.4e-31 140.2 295 36.9
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 2.4e-31 140.2 287 36.2
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 3.1e-31 139.8 311 34.7
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 3.1e-31 139.8 290 37.2
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 3.1e-31 139.8 283 33.6
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 3.1e-31 139.8 294 35.0
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 4.0e-31 139.4 290 36.2
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 9.0e-31 138.3 293 34.1
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 4.5e-30 136.0 289 31.8
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 1.7e-29 134.0 313 33.2
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.8e-29 132.9 325 32.9
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 4.9e-29 132.5 294 34.4
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 6.5e-29 132.1 293 35.2
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 6.5e-29 132.1 290 35.9
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 8.4e-29 131.7 286 36.0
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 1.4e-28 131.0 308 34.1
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 2.5e-28 130.2 305 32.1
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 4.2e-28 129.4 271 34.3
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 5.5e-28 129.0 248 40.7
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 5.5e-28 129.0 288 34.7
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 5.5e-28 129.0 305 35.7
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 7.1e-28 128.6 308 32.5
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 7.1e-28 128.6 283 35.3
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 9.3e-28 128.3 302 34.1
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 9.3e-28 128.3 298 35.2
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 1.6e-27 127.5 293 32.1
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 1.6e-27 127.5 290 31.0
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 2.7e-27 126.7 304 34.5
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 2.7e-27 126.7 306 32.4
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 2.7e-27 126.7 298 33.6
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 3.5e-27 126.3 304 34.5
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 3.5e-27 126.3 305 34.8
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 3.5e-27 126.3 297 33.0
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 3.5e-27 126.3 283 34.3
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.6e-27 125.9 297 34.7
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 6.0e-27 125.6 271 34.7
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 1.0e-26 124.8 280 34.6
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 2.3e-26 123.6 280 33.9
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 2.3e-26 123.6 313 32.6
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 5.1e-26 122.5 304 31.2
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 8.7e-26 121.7 312 31.7
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 1.5e-25 120.9 200 41.5
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.9e-25 120.6 288 34.4
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.5e-25 120.2 285 36.5
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 3.3e-25 119.8 286 35.3
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 4.3e-25 119.4 305 33.8
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 5.7e-25 119.0 311 33.8
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.3e-24 117.9 305 34.8
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 1.3e-24 117.9 278 33.1
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 2.2e-24 117.1 293 33.1
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 2.2e-24 117.1 305 34.1
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 2.2e-24 117.1 292 33.6
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 3.7e-24 116.3 309 33.0
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.8e-24 115.9 289 34.3
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 4.8e-24 115.9 271 32.8
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 6.3e-24 115.5 286 34.3
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 1.1e-23 114.8 291 34.0
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.1e-23 114.8 299 31.4
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 1.1e-23 114.8 315 32.4
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 1.8e-23 114.0 309 30.1
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 2.4e-23 113.6 190 40.5
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 2.4e-23 113.6 279 34.4
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 3.1e-23 113.2 286 33.6
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.3e-23 112.5 291 33.7
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 6.9e-23 112.1 282 34.8
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.5e-22 110.9 288 33.3
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 3.4e-22 109.8 291 30.6
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.4e-22 109.8 298 31.2
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 4.5e-22 109.4 298 33.2
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 5.9e-22 109.0 289 31.1
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 3.8e-21 106.3 286 30.1
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 8.5e-21 105.1 167 41.3
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 1.1e-20 104.8 243 32.9
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 1.4e-20 104.4 289 31.1
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 5.5e-20 102.4 231 31.2
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 1.6e-19 100.9 279 30.1
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 2.7e-19 100.1 283 30.7
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 4.6e-19 99.4 311 27.3
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.0e-18 98.2 265 31.7
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.4e-18 97.8 284 28.9
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 1.8e-18 97.4 290 31.0
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.8e-18 97.4 180 38.9
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 2.3e-18 97.1 142 39.4
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 3.0e-18 96.7 288 28.1
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 3.0e-18 96.7 258 28.7
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 8.8e-18 95.1 96 46.9
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 8.8e-18 95.1 280 28.6
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 8.8e-18 95.1 297 30.0
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.9e-17 94.0 245 34.3
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 4.8e-16 89.4 97 49.5
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 6.3e-16 89.0 297 28.6
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 2.4e-15 87.0 283 27.9
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 2.4e-15 87.0 290 28.6
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.4e-15 87.0 268 30.2
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 5.3e-15 85.9 287 28.9
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 1.2e-14 84.7 268 29.5
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 2.6e-14 83.6 268 28.7
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 5.9e-14 82.4 124 40.3
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.2e-13 80.5 273 30.0
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 1.4e-12 77.8 93 46.2
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.9e-12 77.4 283 26.9
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.5e-12 77.0 272 27.9
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 7.2e-12 75.5 283 26.1
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.2e-11 74.7 279 27.6
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.6e-11 74.3 91 47.3
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 3.6e-11 73.2 182 31.9
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 2.3e-10 70.5 154 30.5
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 8.8e-10 68.6 73 49.3
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 1.5e-09 67.8 257 30.7
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.5e-09 67.8 112 41.1
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 2.6e-09 67.0 268 27.6
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 1.7e-08 64.3 185 31.9
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 8.2e-08 62.0 273 26.0
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 3.1e-07 60.1 200 31.0
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 4.1e-07 59.7 140 27.9
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 1.2e-06 58.2 233 30.0
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 4.5e-06 56.2 36 63.9


User provided reference genes

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