Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p09290 Brassica napus HOM05D000118 ORTHO05D024577 9.2e-33 142.9 69 100.0
BcaB02g06778 Brassica carinata HOM05D000118 ORTHO05D000098 2.4e-20 101.7 57 87.7
C05p04830 Brassica napus HOM05D000118 ORTHO05D000098 2.4e-20 101.7 57 86.0
A10p05230 Brassica napus HOM05D000118 ORTHO05D000098 3.1e-20 101.3 57 86.0
BolC2t06837H Brassica oleracea HOM05D000118 ORTHO05D024577 4.0e-20 100.9 50 100.0
BolC5t29256H Brassica oleracea HOM05D000118 ORTHO05D000098 8.9e-20 99.8 57 84.2
BolC5t29199H Brassica oleracea HOM05D000118 ORTHO05D024577 5.8e-19 97.1 57 82.5
BcaC05g24323 Brassica carinata HOM05D000118 ORTHO05D000098 9.9e-19 96.3 57 78.9
C06p15490 Brassica napus HOM05D000118 ORTHO05D024577 9.9e-19 96.3 50 96.0
BolC3t14409H Brassica oleracea HOM05D000118 ORTHO05D024577 2.2e-18 95.1 50 94.0
BcaC05g24322 Brassica carinata HOM05D000118 ORTHO05D000098 3.8e-18 94.4 57 80.7
C05p04250 Brassica napus HOM05D000118 ORTHO05D000098 3.8e-18 94.4 57 80.7
Sp1g05370 Schrenkiella parvula HOM05D000118 ORTHO05D000098 7.1e-17 90.1 57 73.7
AT1G06645 Arabidopsis thaliana HOM05D000118 ORTHO05D000098 1.1e-14 82.8 57 66.7
AL1G16650 Arabidopsis lyrata HOM05D000118 ORTHO05D000098 1.9e-14 82.0 57 68.4
Thhalv10009596m.g Eutrema salsugineum HOM05D000118 ORTHO05D000098 3.3e-14 81.3 57 70.2
CARHR006340 Cardamine hirsuta HOM05D000118 ORTHO05D000098 5.6e-14 80.5 57 68.4
A09p66860 Brassica napus HOM05D000118 ORTHO05D000098 1.6e-13 79.0 57 64.9
BraA09t42023Z Brassica rapa HOM05D000118 ORTHO05D000098 1.6e-13 79.0 57 64.9
CARHR006230 Cardamine hirsuta HOM05D000118 ORTHO05D000098 6.2e-13 77.0 57 64.9
CARHR006320 Cardamine hirsuta HOM05D000118 ORTHO05D000098 8.1e-13 76.6 57 66.7
Carub.0001s0598 Capsella rubella HOM05D000118 ORTHO05D000098 1.1e-12 76.3 57 63.2
AT1G06640 Arabidopsis thaliana HOM05D000118 ORTHO05D000098 2.4e-12 75.1 57 63.2
BcaC07g42055 Brassica carinata HOM05D000118 ORTHO05D000098 5.3e-12 73.9 57 63.2
BraA10t42790Z Brassica rapa HOM05D000118 ORTHO05D000098 6.9e-12 73.6 41 90.2
BcaC07g42057 Brassica carinata HOM05D000118 ORTHO05D000098 9.0e-12 73.2 57 61.4
BcaC07g42058 Brassica carinata HOM05D000118 ORTHO05D000098 9.0e-12 73.2 57 61.4
Carub.0001s0597 Capsella rubella HOM05D000118 ORTHO05D000098 9.0e-12 73.2 57 63.2
AL1G16640 Arabidopsis lyrata HOM05D000118 ORTHO05D000098 3.4e-11 71.2 57 57.9
AL1G16660 Arabidopsis lyrata HOM05D000118 ORTHO05D000098 5.8e-11 70.5 57 57.9
C05p04840 Brassica napus HOM05D000118 ORTHO05D000098 5.8e-11 70.5 39 89.7
A09p66880 Brassica napus HOM05D000118 ORTHO05D000098 1.3e-10 69.3 57 61.4
BraA09t42025Z Brassica rapa HOM05D000118 ORTHO05D000098 1.3e-10 69.3 57 61.4
AT1G06650 Arabidopsis thaliana HOM05D000118 ORTHO05D000098 2.2e-10 68.6 57 57.9
BraA09t42024Z Brassica rapa HOM05D000118 ORTHO05D000098 6.4e-10 67.0 57 59.6
C08p51090 Brassica napus HOM05D000118 ORTHO05D000098 1.1e-09 66.2 57 59.6
BolC8t52635H Brassica oleracea HOM05D000118 ORTHO05D000098 1.1e-09 66.2 57 59.6
C08p51130 Brassica napus HOM05D000118 ORTHO05D000098 1.4e-09 65.9 57 57.9
BolC8t52639H Brassica oleracea HOM05D000118 ORTHO05D000098 1.4e-09 65.9 57 57.9
Carub.0007s3307 Capsella rubella HOM05D000118 ORTHO05D000098 3.2e-09 64.7 57 56.1
CARHR006220 Cardamine hirsuta HOM05D000118 ORTHO05D000098 1.2e-08 62.8 57 56.1
BcaC07g42056 Brassica carinata HOM05D000118 ORTHO05D000098 2.3e-07 58.5 57 54.4


User provided reference genes

Program Settings