Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 4.2e-65 251.1 122 100.0
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 1.6e-64 249.2 122 98.4
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 1.6e-64 249.2 122 98.4
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 3.6e-64 248.1 122 97.5
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 3.6e-64 248.1 122 97.5
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 1.6e-59 232.6 120 90.8
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 4.7e-56 221.1 120 86.7
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 1.8e-55 219.2 116 87.9
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 2.3e-55 218.8 125 84.8
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 2.3e-55 218.8 125 84.8
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 2.3e-55 218.8 125 84.8
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 1.5e-54 216.1 121 84.3
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 2.0e-54 215.7 122 83.6
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 2.6e-54 215.3 121 86.0
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 4.3e-49 198.0 123 79.7
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 4.9e-45 184.5 118 72.9
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 1.9e-44 182.6 108 76.9
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 3.2e-44 181.8 94 84.0
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 3.2e-44 181.8 121 70.2
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 9.2e-44 180.3 108 74.1
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 9.2e-44 180.3 106 76.4
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 9.2e-44 180.3 121 67.8
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 1.2e-43 179.9 107 76.6
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 2.1e-43 179.1 109 77.1
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 2.7e-43 178.7 108 73.1
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 1.0e-42 176.8 117 69.2
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 1.0e-42 176.8 107 74.8
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 1.0e-42 176.8 115 68.7
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 1.3e-42 176.4 111 73.0
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 1.3e-42 176.4 118 69.5
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 1.7e-42 176.0 113 69.9
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 5.1e-42 174.5 106 80.2
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 5.1e-42 174.5 95 80.0
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 8.6e-42 173.7 94 81.9
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 1.1e-41 173.3 117 69.2
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 1.1e-41 173.3 111 71.2
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 1.1e-41 173.3 108 74.1
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 1.5e-41 172.9 94 78.7
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 2.5e-41 172.2 99 75.8
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 3.3e-41 171.8 111 72.1
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 3.3e-41 171.8 112 72.3
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 3.3e-41 171.8 103 75.7
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 5.6e-41 171.0 110 66.4
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 5.6e-41 171.0 108 70.4
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 7.3e-41 170.6 113 70.8
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 2.1e-40 169.1 116 69.8
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 2.1e-40 169.1 116 69.8
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 3.6e-40 168.3 93 76.3
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 3.6e-40 168.3 93 76.3
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 6.2e-40 167.5 114 65.8
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 8.1e-40 167.2 106 67.9
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 1.1e-39 166.8 94 77.7
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 1.1e-39 166.8 107 68.2
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 1.4e-39 166.4 109 69.7
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 1.4e-39 166.4 109 69.7
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 1.4e-39 166.4 108 72.2
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 1.8e-39 166.0 108 72.2
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 1.8e-39 166.0 108 72.2
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 2.3e-39 165.6 112 70.5
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 2.3e-39 165.6 105 67.6
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 2.3e-39 165.6 92 78.3
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 3.1e-39 165.2 105 67.6
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 5.2e-39 164.5 114 67.5
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 8.9e-39 163.7 108 68.5
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 1.2e-38 163.3 94 74.5
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.2e-38 163.3 90 80.0
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 1.5e-38 162.9 115 62.6
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 2.0e-38 162.5 112 69.6
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 2.0e-38 162.5 90 78.9
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 2.6e-38 162.2 118 61.9
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 2.6e-38 162.2 116 66.4
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 3.4e-38 161.8 108 68.5
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 3.4e-38 161.8 105 74.3
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 5.8e-38 161.0 108 69.4
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.3e-37 159.8 111 68.5
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 4.9e-37 157.9 124 61.3
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 3.2e-36 155.2 131 61.1
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.2e-36 155.2 112 66.1
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 4.1e-36 154.8 111 64.0
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 2.7e-35 152.1 105 68.6
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 3.5e-35 151.8 130 56.9
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 4.6e-35 151.4 105 63.8
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 7.8e-35 150.6 91 74.7
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 1.0e-34 150.2 94 70.2
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 6.6e-34 147.5 100 70.0
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 4.3e-33 144.8 105 65.7
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 3.6e-32 141.7 97 72.2
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 4.7e-32 141.4 81 76.5
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 6.2e-32 141.0 97 67.0
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 2.4e-31 139.0 97 66.0
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 2.4e-31 139.0 91 65.9
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 4.0e-31 138.3 95 68.4
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 3.8e-29 131.7 91 70.3
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 3.8e-29 131.7 109 62.4
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 3.2e-28 128.6 91 69.2
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 1.2e-27 126.7 111 57.7
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 3.1e-23 112.1 57 84.2
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 4.0e-23 111.7 110 50.0
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 7.6e-22 107.5 109 50.5
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 9.9e-22 107.1 104 46.2
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 1.3e-21 106.7 53 84.9
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.4e-20 103.2 81 56.8
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.5e-19 98.6 74 55.4
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.0e-18 97.1 105 49.5
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 2.6e-14 82.4 43 83.7
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 1.3e-13 80.1 48 70.8
Aa31LG11G12040 Aethionema arabicum HOM05D007033 ORTHO05D008770 2.3e-10 69.3 50 72.0
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 3.7e-08 62.0 69 37.7
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 1.1e-07 60.5 42 57.1
Peaxi162Scf00117g01735 Petunia axillaris HOM05D007033 ORTHO05D008770 1.2e-06 57.0 38 68.4
CBR_g44313 Chara braunii HOM05D007033 ORTHO05D008770 1.5e-06 56.6 63 41.3
CBR_g49607 Chara braunii HOM05D007033 ORTHO05D008770 2.6e-06 55.8 63 42.9


User provided reference genes

Program Settings