Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 6.0e-286 986.9 513 100.0
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 1.7e-277 958.7 506 98.6
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.6e-270 935.6 520 94.6
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 3.5e-270 934.5 513 95.9
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 1.5e-265 919.1 502 96.4
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 6.7e-237 823.9 513 87.5
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 6.3e-227 790.8 505 81.6
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.5e-220 769.6 508 79.3
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 5.2e-197 691.4 509 74.7
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 1.2e-196 690.3 511 74.8
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 9.1e-194 680.6 545 70.6
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 5.0e-184 648.3 505 70.7
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 6.2e-158 561.6 513 60.8
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 4.8e-118 429.1 534 47.2
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 1.2e-116 424.5 521 46.3
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 8.4e-115 418.3 523 46.5
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 1.2e-113 414.5 525 46.5
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.7e-113 413.3 524 46.2
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 6.1e-113 412.1 523 45.9
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 7.9e-113 411.8 530 45.7
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.6e-110 404.1 525 45.7
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 1.4e-109 401.0 516 45.9
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 6.9e-109 398.7 531 44.1
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 5.9e-108 395.6 532 44.0
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 9.4e-106 388.3 489 45.8
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.6e-105 386.0 519 43.9
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 1.8e-104 384.0 544 44.1
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.0e-103 380.6 482 45.4
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 9.7e-103 378.3 521 46.3
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.7e-102 377.5 521 43.6
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 3.1e-101 373.2 526 42.6
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 1.5e-100 370.9 520 45.4
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 2.6e-100 370.2 519 44.9
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 5.9e-100 369.0 524 43.1
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 5.9e-100 369.0 519 44.7
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 8.5e-99 365.2 515 45.2
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 2.5e-98 363.6 521 44.1
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 3.2e-98 363.2 521 44.3
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 9.4e-98 361.7 521 43.2
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 3.6e-97 359.8 521 44.1
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.4e-96 357.8 521 44.0
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.4e-96 357.8 522 44.4
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 3.0e-96 356.7 525 43.6
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 1.1e-95 354.8 515 42.3
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 2.0e-95 354.0 528 42.0
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 9.7e-95 351.7 530 44.2
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.8e-94 350.1 522 44.1
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 3.7e-94 349.7 514 41.8
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 6.3e-94 349.0 475 45.1
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 6.3e-94 349.0 516 42.6
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 4.1e-93 346.3 529 40.8
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 4.1e-93 346.3 517 40.2
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 2.0e-92 344.0 655 36.9
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 2.6e-92 343.6 519 41.2
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.7e-91 340.9 509 41.3
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 6.5e-91 339.0 531 44.8
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.5e-90 337.8 481 42.8
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 5.5e-90 335.9 520 40.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.4e-88 331.3 521 38.4
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 9.1e-85 318.5 513 41.3
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 2.7e-84 317.0 519 41.4
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 5.9e-84 315.8 512 40.2
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 1.5e-82 311.2 499 39.3
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 5.5e-82 309.3 518 40.2
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.6e-81 307.8 355 50.1
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 3.6e-81 306.6 513 37.2
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 4.7e-81 306.2 525 39.4
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 2.3e-80 303.9 479 40.9
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 6.3e-78 295.8 421 41.8
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 8.3e-78 295.4 520 37.3
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 2.7e-76 290.4 481 42.8
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 4.5e-76 289.7 535 35.1
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 3.2e-74 283.5 266 63.9
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 7.2e-74 282.3 526 37.5
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 1.0e-72 278.5 458 41.9
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 7.5e-71 272.3 509 37.1
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 4.5e-68 263.1 505 35.2
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 7.7e-68 262.3 458 41.0
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.7e-67 261.2 676 32.7
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 2.3e-67 260.8 533 37.0
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.8e-65 253.8 383 39.2
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 2.0e-63 247.7 420 40.5
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.3e-62 245.0 428 37.9
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.9e-62 243.8 393 38.4
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 9.2e-61 238.8 267 50.6
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.1e-58 231.9 424 38.9
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 7.3e-58 229.2 457 35.9
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 5.8e-55 219.5 273 48.4
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 1.4e-53 214.9 536 29.3
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 1.6e-52 211.5 298 44.3
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 6.6e-43 179.5 140 82.1
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.5e-42 178.3 228 44.3
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 8.9e-40 169.1 358 35.5
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 8.9e-40 169.1 133 82.7
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 5.8e-39 166.4 542 27.9
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 1.7e-38 164.9 141 70.9
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 1.7e-38 164.9 141 70.9
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 1.4e-37 161.8 294 36.1
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 1.2e-36 158.7 118 75.4
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 1.2e-36 158.7 118 75.4
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 1.2e-36 158.7 118 75.4
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 2.1e-36 157.9 338 34.9
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 7.8e-36 156.0 457 28.9
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 3.0e-35 154.1 316 36.4
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 2.1e-33 147.9 162 49.4
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 2.4e-32 144.4 141 51.8
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 5.2e-32 143.3 146 52.7
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 9.9e-31 139.0 130 52.3
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 2.7e-28 131.0 292 36.0
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 6.0e-28 129.8 113 54.0
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 6.6e-27 126.3 504 25.2
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 8.1e-25 119.4 581 24.3
C05p52870 Brassica napus HOM05D005725 ORTHO05D007531 1.5e-23 115.2 139 52.5
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 5.8e-23 113.2 253 31.2
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 9.9e-23 112.5 106 50.0
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 3.2e-21 107.5 134 46.3
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 4.2e-21 107.1 143 46.9
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.3e-19 102.1 133 40.6
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 3.2e-13 80.9 150 35.3
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.0e-11 74.3 149 30.9
BcaB01g04934 Brassica carinata HOM05D005725 ORTHO05D093362 3.9e-11 73.9 72 61.1
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 2.1e-09 68.2 66 50.0
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 6.9e-08 63.2 96 39.6
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 1.2e-07 62.4 177 28.2
BraA09t40805Z Brassica rapa HOM05D005725 ORTHO05D007531 7.6e-07 59.7 29 89.7


User provided reference genes

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