Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 1.9e-67 259.2 145 100.0
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 1.9e-67 259.2 145 100.0
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 5.2e-62 241.1 145 91.0
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 1.4e-59 233.0 145 81.4
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 1.7e-57 226.1 141 80.9
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 6.6e-49 197.6 147 73.5
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 1.7e-41 172.9 152 67.8
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 7.6e-37 157.5 154 61.0
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 8.4e-36 154.1 140 63.6
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 8.4e-36 154.1 140 63.6
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 1.4e-35 153.3 140 62.9
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 7.9e-34 147.5 140 60.7
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 7.9e-34 147.5 140 60.7
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 4.9e-28 128.3 140 57.1
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 1.6e-26 123.2 137 54.7
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 8.7e-25 117.5 156 51.3
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 5.3e-22 108.2 139 51.1
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 6.9e-22 107.8 156 46.8
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 5.5e-19 98.2 145 49.0
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 2.3e-17 92.8 114 65.8
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 5.3e-14 81.6 151 49.0
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 2.9e-12 75.9 42 73.8
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 3.8e-12 75.5 31 93.5
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.0e-12 75.1 42 73.8
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 5.0e-12 75.1 42 73.8
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 5.0e-12 75.1 42 73.8
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 6.5e-12 74.7 98 42.9
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 6.5e-12 74.7 31 93.5
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 1.1e-11 73.9 31 93.5
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.1e-11 73.9 31 93.5
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 1.1e-11 73.9 31 93.5
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 1.1e-11 73.9 31 93.5
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 1.1e-11 73.9 31 93.5
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 1.4e-11 73.6 41 70.7
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 1.4e-11 73.6 42 71.4
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 1.4e-11 73.6 30 96.7
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 1.4e-11 73.6 41 70.7
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 1.9e-11 73.2 31 93.5
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 2.5e-11 72.8 112 54.5
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 4.2e-11 72.0 117 39.3
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.2e-11 72.0 121 38.8
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 4.2e-11 72.0 31 93.5
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 5.5e-11 71.6 31 90.3
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 5.5e-11 71.6 31 90.3
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 5.5e-11 71.6 31 90.3
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 7.2e-11 71.2 31 90.3
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 9.4e-11 70.9 80 47.5
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 9.4e-11 70.9 105 49.5
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 9.4e-11 70.9 72 72.2
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 1.2e-10 70.5 31 87.1
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.2e-10 70.5 31 87.1
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 1.2e-10 70.5 102 41.2
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 1.2e-10 70.5 102 41.2
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 1.2e-10 70.5 67 56.7
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 1.6e-10 70.1 103 41.7
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 1.6e-10 70.1 31 83.9
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.1e-10 69.7 31 87.1
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 2.1e-10 69.7 31 83.9
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 2.1e-10 69.7 43 72.1
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 2.1e-10 69.7 31 87.1
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 2.1e-10 69.7 33 78.8
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 2.1e-10 69.7 73 50.7
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 2.1e-10 69.7 33 78.8
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.7e-10 69.3 31 87.1
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 2.7e-10 69.3 31 87.1
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 2.7e-10 69.3 31 87.1
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 2.7e-10 69.3 31 87.1
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 4.6e-10 68.6 31 83.9
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 6.1e-10 68.2 31 83.9
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 6.1e-10 68.2 33 81.8
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 6.1e-10 68.2 31 80.6
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 6.1e-10 68.2 31 83.9
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 7.9e-10 67.8 30 86.7
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 7.9e-10 67.8 68 47.1
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 7.9e-10 67.8 31 80.6
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 1.4e-09 67.0 28 92.9
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 1.4e-09 67.0 28 92.9
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.4e-09 67.0 94 38.3
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.8e-09 66.6 31 83.9
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 1.8e-09 66.6 31 83.9
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 1.8e-09 66.6 31 83.9
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.3e-09 66.2 31 83.9
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 2.3e-09 66.2 31 80.6
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 3.9e-09 65.5 29 86.2
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 5.1e-09 65.1 31 80.6
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 6.7e-09 64.7 31 80.6
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 8.8e-09 64.3 29 82.8
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 8.8e-09 64.3 29 82.8
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 1.5e-08 63.5 30 80.0
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 2.0e-08 63.2 29 79.3
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.5e-08 62.8 30 76.7
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.5e-08 62.8 30 76.7
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 2.5e-08 62.8 30 76.7
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 3.3e-08 62.4 30 80.0
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 3.3e-08 62.4 30 80.0
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 3.3e-08 62.4 32 71.9
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 9.7e-08 60.8 30 70.0
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 9.7e-08 60.8 72 38.9
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 2.2e-07 59.7 30 73.3
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 2.2e-07 59.7 31 74.2
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 2.8e-07 59.3 31 71.0
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 2.4e-06 56.2 31 64.5


User provided reference genes

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