Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 5.4e-137 491.1 271 100.0
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 5.4e-137 491.1 271 100.0
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 7.3e-134 480.7 271 95.2
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 8.4e-130 467.2 272 95.6
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 9.3e-129 463.8 272 96.0
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 1.7e-106 389.8 289 76.5
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 8.5e-98 360.9 273 71.8
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 3.1e-92 342.4 275 72.7
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.8e-85 319.3 270 66.7
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.7e-82 310.1 265 67.5
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 3.9e-79 298.9 267 65.9
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 3.3e-78 295.8 198 79.3
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 2.3e-55 219.9 156 73.1
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 2.1e-40 170.2 194 49.5
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 3.6e-40 169.5 166 54.2
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 3.6e-40 169.5 206 50.5
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 1.1e-39 167.9 200 49.0
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 5.2e-39 165.6 172 52.3
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 6.8e-39 165.2 158 58.9
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 1.2e-38 164.5 169 56.2
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 1.2e-38 164.5 172 51.7
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.2e-38 164.5 156 57.7
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 4.4e-38 162.5 141 59.6
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 2.2e-37 160.2 132 60.6
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 4.9e-37 159.1 159 55.3
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 8.3e-37 158.3 152 55.3
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 8.3e-37 158.3 163 55.2
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.9e-36 157.1 165 54.5
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 9.2e-36 154.8 203 44.3
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 9.2e-36 154.8 186 48.4
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 1.0e-34 151.4 156 56.4
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 1.7e-34 150.6 195 46.7
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 3.9e-34 149.4 150 53.3
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 1.1e-33 147.9 167 49.1
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.5e-33 147.5 155 52.9
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 4.3e-33 146.0 194 47.4
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 4.3e-33 146.0 139 56.1
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 5.6e-33 145.6 239 41.0
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 5.6e-33 145.6 216 43.5
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 7.3e-33 145.2 207 44.4
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 1.2e-32 144.4 147 53.7
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.1e-32 143.7 184 45.7
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 2.8e-32 143.3 187 43.3
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 2.8e-32 143.3 185 45.4
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 3.6e-32 142.9 146 52.7
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 3.6e-32 142.9 157 49.7
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 3.6e-32 142.9 154 48.7
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 4.7e-32 142.5 164 47.6
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 6.2e-32 142.1 185 45.4
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 8.1e-32 141.7 147 52.4
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 1.4e-31 141.0 144 53.5
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 1.8e-31 140.6 181 47.0
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 1.8e-31 140.6 133 57.9
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 4.0e-31 139.4 215 48.8
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 4.0e-31 139.4 147 51.0
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 4.0e-31 139.4 244 39.3
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 5.2e-31 139.0 157 48.4
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 6.8e-31 138.7 132 53.8
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 6.8e-31 138.7 245 42.9
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 1.2e-30 137.9 132 51.5
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 1.2e-30 137.9 224 38.8
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 7.5e-30 135.2 131 52.7
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 2.2e-29 133.7 132 50.0
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 2.9e-29 133.3 158 45.6
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 3.7e-29 132.9 158 49.4
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 8.3e-29 131.7 157 47.8
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 8.3e-29 131.7 158 49.4
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 8.3e-29 131.7 141 50.4
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 1.9e-28 130.6 187 42.8
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 3.2e-28 129.8 158 48.7
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 9.2e-28 128.3 144 45.8
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 2.7e-27 126.7 162 45.7
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 4.6e-27 125.9 236 36.4
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.7e-26 124.0 155 41.9
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 3.9e-26 122.9 153 45.8
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 5.1e-26 122.5 140 42.9
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 1.1e-25 121.3 169 40.2
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 1.1e-25 121.3 161 39.8
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 1.5e-25 120.9 155 41.9
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 3.3e-25 119.8 140 42.1
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 3.3e-25 119.8 140 42.1
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 4.3e-25 119.4 191 37.2
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 5.6e-25 119.0 154 40.3
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 9.5e-25 118.2 185 37.8
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 1.2e-24 117.9 160 40.6
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 1.2e-24 117.9 133 43.6
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 1.6e-24 117.5 195 35.4
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.6e-24 116.3 152 40.1
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 4.7e-24 115.9 140 39.3
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 6.2e-24 115.5 175 37.7
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 1.1e-23 114.8 135 43.7
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 1.1e-23 114.8 135 43.7
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 1.8e-23 114.0 140 42.1
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 4.0e-23 112.8 144 41.7
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 5.2e-23 112.5 133 42.1
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 5.2e-23 112.5 133 42.1
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 6.8e-23 112.1 103 55.3
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 8.9e-23 111.7 175 38.9
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 2.0e-22 110.5 135 40.7
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 3.4e-22 109.8 129 43.4
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 4.4e-22 109.4 135 39.3
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.4e-22 109.4 151 39.1
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 9.9e-22 108.2 156 35.3
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 9.9e-22 108.2 137 40.9
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 9.9e-22 108.2 140 40.0
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.2e-21 107.1 130 40.0
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 2.2e-21 107.1 151 39.1
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.9e-21 106.7 166 34.3
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 2.9e-21 106.7 129 41.1
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 3.8e-21 106.3 146 39.0
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 4.9e-21 105.9 129 41.9
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 8.4e-21 105.1 139 38.8
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 8.4e-21 105.1 129 39.5
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 1.1e-20 104.8 189 33.3
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.9e-20 104.0 133 42.1
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 2.4e-20 103.6 96 61.5
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 3.2e-20 103.2 189 32.8
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 5.4e-20 102.4 130 37.7
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 7.1e-20 102.1 167 34.7
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 7.1e-20 102.1 167 34.7
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 1.6e-19 100.9 237 34.2
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 2.1e-19 100.5 229 32.3
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 5.1e-18 95.9 132 37.9
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 6.6e-18 95.5 164 33.5
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 6.6e-18 95.5 144 36.1
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 8.7e-18 95.1 161 36.0
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 8.7e-18 95.1 179 33.0
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 1.1e-17 94.7 168 34.5
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 1.5e-17 94.4 118 41.5
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 1.5e-17 94.4 136 36.0
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 2.5e-17 93.6 138 37.0
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 2.5e-17 93.6 138 37.0
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 2.5e-17 93.6 143 35.7
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 2.5e-17 93.6 143 35.7
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 3.3e-17 93.2 138 37.0
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 3.3e-17 93.2 138 37.0
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 5.6e-17 92.4 132 34.1
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 5.6e-17 92.4 136 34.6
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 7.3e-17 92.0 132 34.1
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 7.3e-17 92.0 119 40.3
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 7.3e-17 92.0 156 34.0
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 9.6e-17 91.7 143 35.0
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 9.6e-17 91.7 139 37.4
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 1.1e-15 88.2 120 37.5
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 6.9e-15 85.5 91 49.5
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 9.0e-15 85.1 99 44.4
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.2e-14 84.7 95 40.0
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 3.4e-14 83.2 122 33.6
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.3e-13 81.3 149 30.9
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 2.2e-13 80.5 122 36.1
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 3.8e-13 79.7 123 36.6
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 8.4e-13 78.6 87 41.4
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 1.9e-12 77.4 90 40.0
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 5.4e-12 75.9 80 50.0
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 2.7e-11 73.6 168 25.6
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 2.3e-10 70.5 97 42.3
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 3.9e-10 69.7 79 38.0
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 1.1e-09 68.2 93 39.8
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 8.1e-08 62.0 59 45.8


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