Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p08120 Brassica napus HOM05D004326 ORTHO05D004570 5.6e-19 96.7 51 100.0
BolC2t06734H Brassica oleracea HOM05D004326 ORTHO05D004570 1.2e-18 95.5 51 98.0
A02p03350 Brassica napus HOM05D004326 ORTHO05D004570 1.8e-17 91.7 51 96.1
BraA02t05306Z Brassica rapa HOM05D004326 ORTHO05D004570 1.8e-17 91.7 51 96.1
CARHR197290 Cardamine hirsuta HOM05D004326 ORTHO05D004570 3.4e-16 87.4 51 92.2
A03p07530 Brassica napus HOM05D004326 ORTHO05D004570 4.9e-15 83.6 51 88.2
BraA03t10081Z Brassica rapa HOM05D004326 ORTHO05D004570 4.9e-15 83.6 51 88.2
Carub.0006s1421 Capsella rubella HOM05D004326 ORTHO05D004570 4.9e-15 83.6 51 86.3
AT5G16023 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 8.4e-15 82.8 52 88.5
AL6G26900 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 4.2e-14 80.5 52 86.5
A10p23030 Brassica napus HOM05D004326 ORTHO05D004570 7.1e-14 79.7 51 82.4
BolC9t58947H Brassica oleracea HOM05D004326 ORTHO05D004570 7.1e-14 79.7 51 82.4
BraA10t44372Z Brassica rapa HOM05D004326 ORTHO05D004570 7.1e-14 79.7 51 82.4
C03p08740 Brassica napus HOM05D004326 ORTHO05D004570 4.6e-13 77.0 45 88.9
BolC3t13372H Brassica oleracea HOM05D004326 ORTHO05D004570 4.6e-13 77.0 45 88.9
Thhalv10015386m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 1.9e-11 71.6 51 78.4
AT3G02493 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.1e-09 65.9 45 75.6
THA.LOC109117262 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.4e-09 64.7 45 73.3
THA.LOC109116985 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 6.9e-09 63.2 40 77.5
C03p40100 Brassica napus HOM05D004326 ORTHO05D004570 1.5e-08 62.0 38 78.9
BraA03t12465Z Brassica rapa HOM05D004326 ORTHO05D004570 1.5e-08 62.0 38 78.9
A03p32970 Brassica napus HOM05D004326 ORTHO05D004570 2.0e-08 61.6 46 67.4
BolC3t16276H Brassica oleracea HOM05D004326 ORTHO05D004570 2.0e-08 61.6 46 67.4
CARHR076480 Cardamine hirsuta HOM05D004326 ORTHO05D004570 2.0e-08 61.6 46 76.1
THA.LOC109116378 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 2.0e-08 61.6 40 77.5
AL3G11830 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 5.8e-08 60.1 51 68.6
THA.LOC109117071 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 7.6e-08 59.7 45 71.1
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 9.9e-08 59.3 36 77.8
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 1.3e-07 58.9 36 77.8
Carub.0003s0160 Capsella rubella HOM05D004326 ORTHO05D004570 2.2e-07 58.2 47 76.6
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 3.8e-07 57.4 36 72.2
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 3.8e-07 57.4 43 65.1
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 4.9e-07 57.0 45 66.7
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 6.4e-07 56.6 45 66.7
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 8.4e-07 56.2 45 66.7
Potri.017G112100 Populus trichocarpa HOM05D004326 ORTHO05D004570 1.1e-06 55.8 47 63.8
PGR042G3431 Punica granatum HOM05D004326 ORTHO05D004570 1.1e-06 55.8 39 66.7
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 1.1e-06 55.8 36 75.0
Carub.0002s1354 Capsella rubella HOM05D004326 ORTHO05D004570 1.9e-06 55.1 40 65.0
Potri.004G102950 Populus trichocarpa HOM05D004326 ORTHO05D004570 1.9e-06 55.1 47 61.7
Manes.02G066501 Manihot esculenta HOM05D004326 ORTHO05D004570 2.4e-06 54.7 36 69.4
TWI56G0546 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 2.4e-06 54.7 46 58.7
Migut.H00527 Erythranthe guttata HOM05D004326 ORTHO05D004570 3.2e-06 54.3 46 56.5
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 3.2e-06 54.3 31 77.4
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 3.2e-06 54.3 31 77.4
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 3.2e-06 54.3 31 77.4
AT1G67265 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 4.2e-06 53.9 40 62.5
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 5.4e-06 53.5 51 58.8
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.4e-06 53.5 38 65.8
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.4e-06 53.5 38 65.8
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 5.4e-06 53.5 38 65.8
Lalb_Chr17g0336511 Lupinus albus HOM05D004326 ORTHO05D004570 5.4e-06 53.5 47 61.7
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 7.1e-06 53.1 38 65.8
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 7.1e-06 53.1 48 56.2
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 7.1e-06 53.1 52 53.8
TWI12G0968 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 7.1e-06 53.1 46 58.7
CAN.G497.3 Capsicum annuum HOM05D004326 ORTHO05D004570 9.3e-06 52.8 40 62.5
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 9.3e-06 52.8 43 62.8


User provided reference genes

Program Settings