Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p07110 Brassica napus HOM05D002486 ORTHO05D002606 5.2e-47 190.7 93 100.0
BolC2t06644H Brassica oleracea HOM05D002486 ORTHO05D002606 5.2e-47 190.7 93 100.0
BcaC03g13465 Brassica carinata HOM05D002486 ORTHO05D002606 8.9e-31 136.7 68 97.1
BraA02t05232Z Brassica rapa HOM05D002486 ORTHO05D002606 1.7e-29 132.5 68 91.2
BcaC03g13463 Brassica carinata HOM05D002486 ORTHO05D002606 1.9e-28 129.0 68 92.6
BolC2t06645H Brassica oleracea HOM05D002486 ORTHO05D002606 4.1e-28 127.9 68 92.6
BcaC03g13464 Brassica carinata HOM05D002486 ORTHO05D002606 7.1e-28 127.1 76 86.8
A02p02630 Brassica napus HOM05D002486 ORTHO05D002606 5.1e-26 120.9 68 88.2
BraA02t05231Z Brassica rapa HOM05D002486 ORTHO05D002606 1.1e-25 119.8 68 88.2
Thhalv10015306m.g Eutrema salsugineum HOM05D002486 ORTHO05D002606 1.3e-21 106.3 68 79.4
BcaNung03112 Brassica carinata HOM05D002486 ORTHO05D002606 3.7e-21 104.8 70 81.4
BcaNung03110 Brassica carinata HOM05D002486 ORTHO05D002606 1.9e-20 102.4 81 71.6
Carub.0006s1644 Capsella rubella HOM05D002486 ORTHO05D002606 3.2e-20 101.7 68 76.5
Sp6g26160 Schrenkiella parvula HOM05D002486 ORTHO05D002606 4.1e-20 101.3 68 75.0
BcaC03g13580 Brassica carinata HOM05D002486 ORTHO05D002606 2.1e-19 99.0 68 73.5
BcaC03g13581 Brassica carinata HOM05D002486 ORTHO05D002606 2.1e-19 99.0 68 73.5
A02p04760 Brassica napus HOM05D002486 ORTHO05D002606 2.1e-19 99.0 68 73.5
BraA02t05435Z Brassica rapa HOM05D002486 ORTHO05D002606 2.1e-19 99.0 68 73.5
Thhalv10015170m.g Eutrema salsugineum HOM05D002486 ORTHO05D002606 3.5e-19 98.2 68 73.5
CARHR194910 Cardamine hirsuta HOM05D002486 ORTHO05D002606 1.3e-18 96.3 68 70.6
BolC2t06881H Brassica oleracea HOM05D002486 ORTHO05D002606 1.7e-18 95.9 68 72.1
BolC3t13498H Brassica oleracea HOM05D002486 ORTHO05D002606 3.0e-18 95.1 71 71.8
BcaB05g23301 Brassica carinata HOM05D002486 ORTHO05D002606 6.6e-18 94.0 68 67.6
BcaB01g05178 Brassica carinata HOM05D002486 ORTHO05D002606 1.5e-17 92.8 71 70.4
C03p10120 Brassica napus HOM05D002486 ORTHO05D002606 1.5e-17 92.8 71 70.4
BraA03t10191Z Brassica rapa HOM05D002486 ORTHO05D002606 1.5e-17 92.8 71 70.4
CARHR198710 Cardamine hirsuta HOM05D002486 ORTHO05D002606 1.9e-17 92.4 69 72.5
BcaB08g36701 Brassica carinata HOM05D002486 ORTHO05D002606 3.3e-17 91.7 70 67.1
BcaB01g06400 Brassica carinata HOM05D002486 ORTHO05D002606 9.6e-17 90.1 68 67.6
CSS0028749 Camellia sinensis var. sinensis HOM05D002486 ORTHO05D002606 1.6e-16 89.4 89 52.8
TPR.G9137 Trifolium pratense HOM05D002486 ORTHO05D002606 2.1e-16 89.0 88 53.4
AT5G14602 Arabidopsis thaliana HOM05D002486 ORTHO05D002606 2.8e-16 88.6 69 71.0
CSS0015391 Camellia sinensis var. sinensis HOM05D002486 ORTHO05D002606 2.8e-16 88.6 71 62.0
THA.LOC104820773 Tarenaya hassleriana HOM05D002486 ORTHO05D002606 2.8e-16 88.6 82 59.8
C02p09720 Brassica napus HOM05D002486 ORTHO05D002606 3.6e-16 88.2 66 68.2
AL6G25370 Arabidopsis lyrata HOM05D002486 ORTHO05D002606 4.7e-16 87.8 69 68.1
A03p08680 Brassica napus HOM05D002486 ORTHO05D002606 4.7e-16 87.8 71 67.6
BolC9t58726H Brassica oleracea HOM05D002486 ORTHO05D002606 6.2e-16 87.4 68 66.2
C09p58820 Brassica napus HOM05D002486 ORTHO05D002606 8.1e-16 87.0 71 64.8
Sabra13G0051700 Salix brachista HOM05D002486 ORTHO05D002606 1.1e-15 86.7 71 63.4
GSVIVG01001063001 Vitis vinifera HOM05D002486 ORTHO05D002606 1.1e-15 86.7 82 59.8
Carub.0006s1278 Capsella rubella HOM05D002486 ORTHO05D002606 1.4e-15 86.3 69 68.1
Actinidia17304 Actinidia chinensis HOM05D002486 ORTHO05D002606 1.8e-15 85.9 71 62.0
AT5G18150 Arabidopsis thaliana HOM05D002486 ORTHO05D002606 1.8e-15 85.9 68 64.7
A10p21350 Brassica napus HOM05D002486 ORTHO05D002606 1.8e-15 85.9 68 66.2
BraA10t44198Z Brassica rapa HOM05D002486 ORTHO05D002606 1.8e-15 85.9 68 66.2
AL6G29350 Arabidopsis lyrata HOM05D002486 ORTHO05D002606 2.4e-15 85.5 68 64.7
Potri.013G058200 Populus trichocarpa HOM05D002486 ORTHO05D002606 2.4e-15 85.5 71 62.0
Lalb_Chr02g0157121 Lupinus albus HOM05D002486 ORTHO05D002606 3.1e-15 85.1 81 51.9
Lalb_Chr06g0173991 Lupinus albus HOM05D002486 ORTHO05D002606 4.0e-15 84.7 86 54.7
BcaC03g13469 Brassica carinata HOM05D002486 ORTHO05D002606 6.8e-15 84.0 69 66.7
Psat1g092160 Pisum sativum HOM05D002486 ORTHO05D002606 6.8e-15 84.0 88 52.3
Aa31LG11G11450 Aethionema arabicum HOM05D002486 ORTHO05D002606 8.9e-15 83.6 69 62.3
Manes.08G144400 Manihot esculenta HOM05D002486 ORTHO05D002606 8.9e-15 83.6 71 60.6
Manes.09G141300 Manihot esculenta HOM05D002486 ORTHO05D002606 8.9e-15 83.6 71 59.2
THA.LOC104827276 Tarenaya hassleriana HOM05D002486 ORTHO05D002606 1.2e-14 83.2 72 63.9
Actinidia38614 Actinidia chinensis HOM05D002486 ORTHO05D002606 1.5e-14 82.8 71 59.2
Medtr6g029390 Medicago truncatula HOM05D002486 ORTHO05D002606 1.5e-14 82.8 90 50.0
QL07p019482 Quercus lobata HOM05D002486 ORTHO05D002606 1.5e-14 82.8 82 52.4
Dinv14577 Davidia involucrata HOM05D001630 ORTHO05D002606 2.0e-14 82.4 74 64.9
arahy.Tifrunner.gnm1.ann1.CLS04B Arachis hypogaea HOM05D002486 ORTHO05D002606 2.6e-14 82.0 86 47.7
arahy.Tifrunner.gnm1.ann1.GK9JFI Arachis hypogaea HOM05D002486 ORTHO05D002606 2.6e-14 82.0 86 47.7
Gohir.A11G259700 Gossypium hirsutum HOM05D002486 ORTHO05D002606 2.6e-14 82.0 71 59.2
Gohir.D11G269800 Gossypium hirsutum HOM05D002486 ORTHO05D002606 2.6e-14 82.0 71 57.7
Gorai.007G289900 Gossypium raimondii HOM05D002486 ORTHO05D002606 2.6e-14 82.0 71 59.2
Potri.019G035000 Populus trichocarpa HOM05D002486 ORTHO05D002606 2.6e-14 82.0 70 60.0
Rhsim04G0087700 Rhododendron simsii HOM05D002486 ORTHO05D002606 2.6e-14 82.0 71 57.7
Ciclev10022769m.g Citrus clementina HOM05D002486 ORTHO05D002606 4.4e-14 81.3 72 58.3
Glyma.02G072300 Glycine max HOM05D002486 ORTHO05D002606 4.4e-14 81.3 88 54.5
Medtr5g098200 Medicago truncatula HOM05D002486 ORTHO05D002606 4.4e-14 81.3 83 50.6
Cpa.g.sc51.116 Carica papaya HOM05D002486 ORTHO05D002606 7.6e-14 80.5 70 55.7
COL.COLO4_13595 Corchorus olitorius HOM05D002486 ORTHO05D002606 9.9e-14 80.1 72 59.7
Sabra19G0045000 Salix brachista HOM05D002486 ORTHO05D002606 9.9e-14 80.1 71 59.2
BcaC03g13467 Brassica carinata HOM05D002486 ORTHO05D002606 1.7e-13 79.3 69 66.7
Sc06g0000380 Simmondsia chinensis HOM05D002486 ORTHO05D002606 1.7e-13 79.3 92 46.7
Phvul.004G080100 Phaseolus vulgaris HOM05D002486 ORTHO05D002606 2.2e-13 79.0 88 50.0
Duzib128G1093 Durio zibethinus HOM05D002486 ORTHO05D002606 2.9e-13 78.6 70 57.1
Sabra19G0042700 Salix brachista HOM05D002486 ORTHO05D002606 2.9e-13 78.6 71 57.7
GSVIVG01033404001 Vitis vinifera HOM05D002486 ORTHO05D002606 2.9e-13 78.6 80 57.5
Glyma.16G153500 Glycine max HOM05D002486 ORTHO05D002606 3.8e-13 78.2 88 52.3
Atru.chr2.1382 Acer truncatum HOM05D002486 ORTHO05D002606 4.9e-13 77.8 68 57.4
Oeu024504.1 Olea europaea HOM05D002486 ORTHO05D002606 6.4e-13 77.4 77 58.4
PGR042G1972 Punica granatum HOM05D002486 ORTHO05D002606 6.4e-13 77.4 70 52.9
Thecc.05G294700 Theobroma cacao HOM05D002486 ORTHO05D002606 6.4e-13 77.4 69 58.0
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 8.4e-13 77.0 70 62.9
Cfa016443 Carpinus fangiana HOM05D002486 ORTHO05D002606 1.1e-12 76.6 70 54.3
Glyma.19G112000 Glycine max HOM05D002486 ORTHO05D002606 1.4e-12 76.3 81 46.9
TAR623G1300 Trochodendron aralioides HOM05D002486 ORTHO05D002606 1.4e-12 76.3 73 56.2
Cc06_g22980 Coffea canephora HOM05D002486 ORTHO05D002606 1.9e-12 75.9 71 56.3
Haze_19449 Corylus avellana HOM05D002486 ORTHO05D002606 1.9e-12 75.9 70 52.9
DCAR_013687 Daucus carota HOM05D002486 ORTHO05D002606 2.4e-12 75.5 75 52.0
Haze_19420 Corylus avellana HOM05D002486 ORTHO05D002606 3.2e-12 75.1 70 52.9
Duzib177G0910 Durio zibethinus HOM05D002486 ORTHO05D002606 3.2e-12 75.1 71 57.7
Duzib177G1131 Durio zibethinus HOM05D002486 ORTHO05D002606 3.2e-12 75.1 71 57.7
Phvul.001G110700 Phaseolus vulgaris HOM05D002486 ORTHO05D002606 3.2e-12 75.1 68 54.4
Hund19234 Selenicereus undatus HOM05D002486 ORTHO05D002606 4.2e-12 74.7 77 54.5
Ca_08265_v3 Cicer arietinum L. HOM05D002486 ORTHO05D002606 5.4e-12 74.3 87 44.8
DCAR_017052 Daucus carota HOM05D002486 ORTHO05D002606 5.4e-12 74.3 75 52.0
Sed0026925 Sechium edule HOM05D002486 ORTHO05D002606 5.4e-12 74.3 68 50.0
TPR.G5914 Trifolium pratense HOM05D002486 ORTHO05D002606 5.4e-12 74.3 87 43.7
Eucgr.A02098 Eucalyptus grandis HOM05D002486 ORTHO05D002606 7.1e-12 73.9 71 56.3
Medtr7g085610 Medicago truncatula HOM05D002486 ORTHO05D002606 9.3e-12 73.6 87 44.8
EL10Ac3g06824 Beta vulgaris HOM05D002486 ORTHO05D002606 1.2e-11 73.2 73 53.4
Gohir.A11G296400 Gossypium hirsutum HOM05D002486 ORTHO05D002606 1.6e-11 72.8 73 50.7
Glyma.16G041100 Glycine max HOM05D002486 ORTHO05D002606 2.1e-11 72.4 82 43.9
ClCG04G005330 Citrullus lanatus HOM05D002486 ORTHO05D002606 3.5e-11 71.6 100 39.0
Gorai.007G343300 Gossypium raimondii HOM05D002486 ORTHO05D002606 7.8e-11 70.5 91 42.9
MD14G1002600 Malus domestica HOM05D002486 ORTHO05D002606 7.8e-11 70.5 78 47.4
CAN.G1001.29 Capsicum annuum HOM05D002486 ORTHO05D002606 1.0e-10 70.1 72 50.0
CsaV3_4G013260 Cucumis sativus L. HOM05D002486 ORTHO05D002606 1.3e-10 69.7 77 48.1
CANSAT78G1855 Cannabis sativa HOM05D002486 ORTHO05D002606 1.7e-10 69.3 79 51.9
Gohir.D11G310500 Gossypium hirsutum HOM05D002486 ORTHO05D002606 1.7e-10 69.3 88 45.5
Gohir.D13G177800 Gossypium hirsutum HOM05D002486 ORTHO05D002606 1.7e-10 69.3 75 46.7
MBI04_g38345_MAGBIO Magnolia biondii HOM05D002486 ORTHO05D002606 1.7e-10 69.3 73 52.1
MD12G1003700 Malus domestica HOM05D002486 ORTHO05D002606 1.7e-10 69.3 82 46.3
CiPaw.10G001000 Carya illinoinensis HOM05D002486 ORTHO05D002606 2.3e-10 68.9 70 50.0
Solyc06g075190.1 Solanum lycopersicum HOM05D002486 ORTHO05D002606 2.3e-10 68.9 78 47.4
Sopen06g031600 Solanum pennellii HOM05D002486 ORTHO05D002606 2.3e-10 68.9 78 47.4
PGSC0003DMG400003369 Solanum tuberosum HOM05D002486 ORTHO05D002606 2.3e-10 68.9 78 47.4
Gorai.013G203100 Gossypium raimondii HOM05D002486 ORTHO05D002606 3.0e-10 68.6 76 47.4
Lj1g0009743 Lotus japonicus HOM05D002486 ORTHO05D002606 3.0e-10 68.6 71 49.3
Nn2g15866 Nelumbo nucifera HOM05D002486 ORTHO05D002606 3.0e-10 68.6 76 47.4
AUR62032050 Chenopodium quinoa HOM05D002486 ORTHO05D002606 5.1e-10 67.8 81 45.7
AUR62032697 Chenopodium quinoa HOM05D002486 ORTHO05D002606 5.1e-10 67.8 81 45.7
DCAR_019877 Daucus carota HOM05D002486 ORTHO05D002606 5.1e-10 67.8 72 48.6
TWI32G0446 Tripterygium wilfordii HOM05D002486 ORTHO05D002606 6.6e-10 67.4 74 51.4
MELO3C008804.2 Cucumis melo HOM05D002486 ORTHO05D002606 1.5e-09 66.2 86 40.7
Gohir.A13G171950 Gossypium hirsutum HOM05D002486 ORTHO05D002606 2.5e-09 65.5 76 46.1
Nitab4.5_0000394g0010 Nicotiana tabacum HOM05D002486 ORTHO05D002606 2.5e-09 65.5 83 48.2
Ah.04g153170 Amaranthus hybridus HOM05D002486 ORTHO05D002606 3.3e-09 65.1 73 47.9
Nitab4.5_0000626g0060 Nicotiana tabacum HOM05D002486 ORTHO05D002606 3.3e-09 65.1 83 49.4
Peaxi162Scf00463g00001 Petunia axillaris HOM05D002486 ORTHO05D002606 3.3e-09 65.1 73 50.7
HanXRQChr13g0397721 Helianthus annuus HOM05D002486 ORTHO05D002606 4.3e-09 64.7 86 41.9
Prupe.7G004200 Prunus persica HOM05D002486 ORTHO05D002606 4.3e-09 64.7 70 51.4
CDE02G4642 Ceratophyllum demersum HOM05D002486 ORTHO05D002606 1.3e-08 63.2 68 41.2
HanXRQChr02g0054231 Helianthus annuus HOM05D002486 ORTHO05D002606 1.6e-08 62.8 86 40.7
Migut.J01886 Erythranthe guttata HOM05D002486 ORTHO05D002606 2.8e-08 62.0 78 46.2
Psat0s1971g0080 Pisum sativum HOM05D002486 ORTHO05D002606 3.6e-08 61.6 87 39.1
CDE02G2185 Ceratophyllum demersum HOM05D002486 ORTHO05D002606 1.1e-07 60.1 71 40.8
Lsat_1_v5_gn_6_37000 Lactuca sativa HOM05D002486 ORTHO05D002606 1.8e-07 59.3 73 47.9
ATR0737G176 Amborella trichopoda HOM05D002486 ORTHO05D002606 1.5e-06 56.2 70 45.7
C03p14410 Brassica napus HOM05D002486 ORTHO05D002606 1.5e-06 56.2 74 40.5
AT5G58375 Arabidopsis thaliana HOM05D002486 ORTHO05D002606 2.0e-06 55.8 71 42.3
vmacro09139 Vaccinium macrocarpon HOM05D002486 ORTHO05D002606 2.0e-06 55.8 55 54.5
AL8G34530 Arabidopsis lyrata HOM05D002486 ORTHO05D002606 2.6e-06 55.5 71 42.3
Mapoly0027s0077 Marchantia polymorpha HOM05D002486 ORTHO05D002606 2.6e-06 55.5 73 41.1
Carub.0008s1896 Capsella rubella HOM05D002486 ORTHO05D002606 4.4e-06 54.7 71 42.3
Atru.chr2.1386 Acer truncatum HOM05D002486 ORTHO05D002606 5.8e-06 54.3 29 86.2
BcaB01g04528 Brassica carinata HOM05D002486 ORTHO05D002606 7.6e-06 53.9 74 39.2
A10p15880 Brassica napus HOM05D002486 ORTHO05D002606 7.6e-06 53.9 73 41.1
BolC3t13884H Brassica oleracea HOM05D002486 ORTHO05D002606 7.6e-06 53.9 74 39.2
BraA10t43637Z Brassica rapa HOM05D002486 ORTHO05D002606 7.6e-06 53.9 73 41.1
SEGI_01199 Sequoiadendron giganteum HOM05D002486 ORTHO05D002606 7.6e-06 53.9 73 39.7
SGA_v2.0_scaffold394G50716 Striga asiatica HOM05D002486 ORTHO05D002606 7.6e-06 53.9 82 42.7
BcaC04g19872 Brassica carinata HOM05D002486 ORTHO05D002606 9.9e-06 53.5 69 42.0


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