Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p07050 Brassica napus HOM05D002679 ORTHO05D011194 2.7e-154 548.5 260 100.0
BolC2t06639H Brassica oleracea HOM05D018487 ORTHO05D023974 8.7e-100 367.5 175 98.3
C02p64430 Brassica napus HOM05D002679 ORTHO05D011194 5.1e-92 341.7 277 63.9
BolC2t12507H Brassica oleracea HOM05D002679 ORTHO05D011194 6.7e-92 341.3 278 63.7
BcaC03g13483 Brassica carinata HOM05D002679 ORTHO05D011194 1.5e-72 276.9 279 53.8
BcaC03g18368 Brassica carinata HOM05D002679 ORTHO05D011194 5.0e-71 271.9 219 63.9
C02p06820 Brassica napus HOM05D002679 ORTHO05D011194 5.0e-71 271.9 283 51.9
C02p06810 Brassica napus HOM05D002679 ORTHO05D011194 1.4e-70 270.4 279 52.7
C02p06990 Brassica napus HOM05D002679 ORTHO05D011194 4.2e-70 268.9 283 51.2
BolC2t06631H Brassica oleracea HOM05D002679 ORTHO05D011194 4.2e-70 268.9 283 51.2
C02p07030 Brassica napus HOM05D002679 ORTHO05D011194 5.5e-70 268.5 283 51.2
BcaC03g13479 Brassica carinata HOM05D002679 ORTHO05D011194 2.7e-69 266.2 283 51.6
BolC2t06633H Brassica oleracea HOM05D002679 ORTHO05D011194 5.7e-67 258.5 278 50.4
C02p06800 Brassica napus HOM05D002679 ORTHO05D011194 2.4e-65 253.1 250 53.6
BraA02t05227Z Brassica rapa HOM05D002679 ORTHO05D011194 4.1e-65 252.3 263 52.1
BcaC03g13482 Brassica carinata HOM05D002679 ORTHO05D011194 9.1e-65 251.1 260 51.9
A02p02590 Brassica napus HOM05D018487 ORTHO05D011194 2.6e-64 249.6 257 52.5
BcaC03g13474 Brassica carinata HOM05D002679 ORTHO05D011194 1.7e-63 246.9 207 64.7
BolC2t06636H Brassica oleracea HOM05D002679 ORTHO05D011194 7.9e-61 238.0 259 50.2
BcaNung04303 Brassica carinata HOM05D002679 ORTHO05D011194 1.1e-49 201.1 246 45.9
BolC2t06624H Brassica oleracea HOM05D002679 ORTHO05D011194 1.1e-49 201.1 136 72.1
Carub.0007s2335 Capsella rubella HOM05D002679 ORTHO05D011194 1.6e-37 160.6 271 38.7
AL7G36490 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.0e-36 157.9 271 39.1
AL7G36480 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.8e-36 157.1 272 39.0
AL7G36510 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.8e-36 157.1 272 39.0
C02p06880 Brassica napus HOM05D002679 ORTHO05D011194 2.0e-35 153.7 107 71.0
Carub.0007s3636 Capsella rubella HOM05D002679 ORTHO05D011194 5.7e-35 152.1 278 37.1
AT4G17700 Arabidopsis thaliana HOM05D002679 ORTHO05D011194 2.8e-34 149.8 140 52.9
Carub.0007s2334 Capsella rubella HOM05D002679 ORTHO05D011194 7.7e-32 141.7 219 38.8
Thhalv10009541m.g Eutrema salsugineum HOM05D002679 ORTHO05D011194 1.7e-26 124.0 120 50.8
Thhalv10009919m.g Eutrema salsugineum HOM05D002679 ORTHO05D011194 1.7e-26 124.0 120 50.8
AT4G17990 Arabidopsis thaliana HOM05D002679 ORTHO05D011194 2.3e-23 113.6 177 40.7
BcaC03g13476 Brassica carinata HOM05D002679 ORTHO05D011194 3.0e-20 103.2 64 71.9
C02p06870 Brassica napus HOM05D002679 ORTHO05D011194 3.0e-20 103.2 64 71.9
C02p06910 Brassica napus HOM05D002679 ORTHO05D011194 3.0e-20 103.2 64 71.9
AL8G40780 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 7.8e-16 88.6 140 37.1
AL6G32810 Arabidopsis lyrata HOM05D002679 ORTHO05D014856 1.7e-15 87.4 212 33.0
BcaNung03139 Brassica carinata HOM05D002679 ORTHO05D011194 2.3e-15 87.0 69 63.8
BcaC07g38546 Brassica carinata HOM05D002679 ORTHO05D024283 3.0e-15 86.7 110 40.9
BolC8t48984H Brassica oleracea HOM05D002679 ORTHO05D024283 3.0e-15 86.7 110 40.9
BolC1t05512H Brassica oleracea HOM05D002679 ORTHO05D014856 5.0e-15 85.9 213 31.0
AL108U10030 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 8.6e-15 85.1 263 30.4
BcaC03g17685 Brassica carinata HOM05D002679 ORTHO05D012984 5.6e-14 82.4 221 31.2
BcaC07g38618 Brassica carinata HOM05D002679 ORTHO05D027393 5.6e-14 82.4 82 47.6
BcaB07g34162 Brassica carinata HOM05D002679 ORTHO05D012984 9.5e-14 81.6 123 38.2
BcaC07g38549 Brassica carinata HOM05D001056 ORTHO05D000902 9.5e-14 81.6 111 43.2
Carub.0006s1922 Capsella rubella HOM05D002679 ORTHO05D014856 2.1e-13 80.5 214 30.4
BcaC05g29555 Brassica carinata HOM05D002679 ORTHO05D032648 4.7e-13 79.3 80 52.5
C05p59700 Brassica napus HOM05D002679 ORTHO05D032648 4.7e-13 79.3 80 52.5
BolC5t34624H Brassica oleracea HOM05D002679 ORTHO05D032648 4.7e-13 79.3 80 52.5
AL7G47200 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 6.2e-13 79.0 77 51.9
C08p13490 Brassica napus HOM05D002679 ORTHO05D024283 6.2e-13 79.0 82 47.6
Thhalv10027826m.g Eutrema salsugineum HOM05D002679 ORTHO05D012311 6.2e-13 79.0 95 42.1
CARHR028040 Cardamine hirsuta HOM05D002679 ORTHO05D010703 8.0e-13 78.6 116 40.5
AL5G38700 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.1e-12 78.2 118 39.0
Thhalv10004573m.g Eutrema salsugineum HOM05D002679 ORTHO05D014856 1.1e-12 78.2 213 31.5
C05p24780 Brassica napus HOM05D002679 ORTHO05D012311 1.4e-12 77.8 121 38.8
Carub.0006s1923 Capsella rubella HOM05D002679 ORTHO05D014856 1.8e-12 77.4 209 30.1
BcaB04g21259 Brassica carinata HOM05D002679 ORTHO05D014856 2.3e-12 77.0 219 30.1
BcaC02g12322 Brassica carinata HOM05D002679 ORTHO05D014105 2.3e-12 77.0 115 38.3
A07p13740 Brassica napus HOM05D002679 ORTHO05D010703 2.3e-12 77.0 223 29.6
C02p56940 Brassica napus HOM05D002679 ORTHO05D012984 2.3e-12 77.0 132 36.4
BolC2t11763H Brassica oleracea HOM05D002679 ORTHO05D012984 2.3e-12 77.0 132 36.4
BolC5t31206H Brassica oleracea HOM05D002679 ORTHO05D012311 2.3e-12 77.0 121 38.0
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 3.1e-12 76.6 270 27.4
Carub.0007s3405 Capsella rubella HOM05D002679 ORTHO05D012311 3.1e-12 76.6 79 48.1
A08p34130 Brassica napus HOM05D002679 ORTHO05D024283 4.0e-12 76.3 77 48.1
BraA08t35325Z Brassica rapa HOM05D002679 ORTHO05D024283 4.0e-12 76.3 77 48.1
BcaC09g47966 Brassica carinata HOM05D002679 ORTHO05D014856 5.2e-12 75.9 92 42.4
Carub.0007s3406 Capsella rubella HOM05D002679 ORTHO05D012311 5.2e-12 75.9 77 49.4
AT1G23950 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 6.8e-12 75.5 137 35.0
AT1G23970 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 6.8e-12 75.5 137 36.5
CARHR170750 Cardamine hirsuta HOM05D002679 ORTHO05D012311 6.8e-12 75.5 113 40.7
BcaC06g33274 Brassica carinata HOM05D002679 ORTHO05D012452 8.9e-12 75.1 75 48.0
BraA09t39473Z Brassica rapa HOM05D002679 ORTHO05D012311 8.9e-12 75.1 121 38.0
AT1G02770 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.2e-11 74.7 273 27.8
BcaC05g26430 Brassica carinata HOM05D002679 ORTHO05D012311 1.2e-11 74.7 121 37.2
BraA09t39471Z Brassica rapa HOM05D002679 ORTHO05D012311 1.5e-11 74.3 121 37.2
BcaC06g35072 Brassica carinata HOM05D002679 ORTHO05D010703 2.0e-11 73.9 257 27.2
A09p39720 Brassica napus HOM05D002679 ORTHO05D012311 2.0e-11 73.9 121 37.2
CARHR279920 Cardamine hirsuta HOM05D002679 ORTHO05D012984 2.6e-11 73.6 137 38.7
BcaB08g37262 Brassica carinata HOM05D003355 ORTHO05D006192 5.8e-11 72.4 119 37.0
BcaC08g43156 Brassica carinata HOM05D002679 ORTHO05D012311 7.5e-11 72.0 121 37.2
C06p04390 Brassica napus HOM05D002679 ORTHO05D012311 7.5e-11 72.0 121 37.2
C06p20110 Brassica napus HOM05D002679 ORTHO05D010656 7.5e-11 72.0 83 42.2
BolC6t35570H Brassica oleracea HOM05D002679 ORTHO05D012311 7.5e-11 72.0 121 37.2
BolC6t37193H Brassica oleracea HOM05D002679 ORTHO05D010656 7.5e-11 72.0 83 42.2
A02p37800 Brassica napus HOM05D002679 ORTHO05D012984 9.8e-11 71.6 113 38.1
BNapus_Darmor_BZH_scaffold_167p00040 Brassica napus HOM05D002679 ORTHO05D014856 9.8e-11 71.6 89 43.8
BolC2t11767H Brassica oleracea HOM05D002679 ORTHO05D012984 9.8e-11 71.6 115 38.3
BolC4t22164H Brassica oleracea HOM05D002679 ORTHO05D014105 1.3e-10 71.2 87 41.4
BraA02t08763Z Brassica rapa HOM05D002679 ORTHO05D012984 1.3e-10 71.2 113 38.1
BcaB01g04250 Brassica carinata HOM05D002679 ORTHO05D012452 3.7e-10 69.7 124 34.7
BcaC03g17689 Brassica carinata HOM05D002679 ORTHO05D012984 3.7e-10 69.7 113 38.1
C02p56980 Brassica napus HOM05D002679 ORTHO05D012984 3.7e-10 69.7 113 38.1
Carub.0001s2694 Capsella rubella HOM05D002679 ORTHO05D010703 3.7e-10 69.7 84 44.0
BraA01t04335Z Brassica rapa HOM05D002679 ORTHO05D014856 4.9e-10 69.3 86 44.2
Carub.0008s2459 Capsella rubella HOM05D002666 ORTHO05D004769 8.3e-10 68.6 235 28.9
Thhalv10028156m.g Eutrema salsugineum HOM05D002679 ORTHO05D010656 8.3e-10 68.6 64 50.0
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.1e-09 68.2 122 35.2
AL1G40550 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.1e-09 68.2 107 37.4
AL1G56900 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.1e-09 68.2 218 29.8
BcaC03g13473 Brassica carinata HOM05D018487 ORTHO05D023974 1.1e-09 68.2 39 84.6
Carub.0001s2342 Capsella rubella HOM05D002679 ORTHO05D010703 1.9e-09 67.4 77 40.3
C05p43390 Brassica napus HOM05D002679 ORTHO05D010703 2.4e-09 67.0 121 32.2
C02p06920 Brassica napus HOM05D002679 ORTHO05D011194 4.1e-09 66.2 51 64.7
AL4G35970 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 5.4e-09 65.9 207 30.0
AL7G36880 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 9.2e-09 65.1 69 53.6
BcaC07g38413 Brassica carinata HOM05D002679 ORTHO05D010656 1.2e-08 64.7 101 37.6
AL1G42110 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.6e-08 64.3 124 33.1
AL2G22820 Arabidopsis lyrata HOM05D002679 ORTHO05D023662 1.6e-08 64.3 76 43.4
AT1G28500 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 1.6e-08 64.3 124 30.6
BcaB03g14127 Brassica carinata HOM05D002679 ORTHO05D010703 2.1e-08 63.9 76 42.1
Carub.0006s2550 Capsella rubella HOM05D002666 ORTHO05D004769 2.1e-08 63.9 268 24.3
CARHR160050 Cardamine hirsuta HOM05D002679 ORTHO05D010703 2.1e-08 63.9 121 34.7
AL1G37670 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 2.7e-08 63.5 137 31.4
Carub.0008s0956 Capsella rubella HOM05D002666 ORTHO05D004769 2.7e-08 63.5 234 28.6
Thhalv10009578m.g Eutrema salsugineum HOM05D002679 ORTHO05D010703 3.5e-08 63.2 79 44.3
AL1G49380 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 4.6e-08 62.8 225 28.0
BcaC06g35071 Brassica carinata HOM05D002679 ORTHO05D010703 4.6e-08 62.8 81 39.5
BcaC07g38579 Brassica carinata HOM05D002679 ORTHO05D027393 4.6e-08 62.8 77 42.9
Carub.0001s2632 Capsella rubella HOM05D002679 ORTHO05D010703 4.6e-08 62.8 84 36.9
BcaB02g08996 Brassica carinata HOM05D002679 ORTHO05D014105 6.0e-08 62.4 95 36.8
BcaC07g38420 Brassica carinata HOM05D002679 ORTHO05D010656 6.0e-08 62.4 77 44.2
BcaC07g38440 Brassica carinata HOM05D002679 ORTHO05D010656 6.0e-08 62.4 100 39.0
C08p11810 Brassica napus HOM05D002679 ORTHO05D010656 6.0e-08 62.4 77 44.2
C08p11990 Brassica napus HOM05D002679 ORTHO05D010656 6.0e-08 62.4 77 44.2
AT1G22090 Arabidopsis thaliana HOM05D002679 ORTHO05D010656 7.8e-08 62.0 76 39.5
AT3G19520 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 7.8e-08 62.0 267 23.6
BcaC01g01195 Brassica carinata HOM05D002666 ORTHO05D004769 7.8e-08 62.0 221 27.6
AL1G35520 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.0e-07 61.6 76 38.2
AT1G24388 Arabidopsis thaliana HOM05D002679 ORTHO05D010656 1.0e-07 61.6 86 36.0
A08p35200 Brassica napus HOM05D002679 ORTHO05D010656 1.0e-07 61.6 77 41.6
BraA08t35429Z Brassica rapa HOM05D002679 ORTHO05D010656 1.0e-07 61.6 77 41.6
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.3e-07 61.2 224 27.2
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 1.7e-07 60.8 84 39.3
BolC8t48847H Brassica oleracea HOM05D002679 ORTHO05D010656 1.7e-07 60.8 101 37.6
AL3G32940 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 2.3e-07 60.5 133 33.1
BcaC03g18072 Brassica carinata HOM05D002679 ORTHO05D012984 2.3e-07 60.5 113 32.7
A08p20500 Brassica napus HOM05D002666 ORTHO05D004769 2.3e-07 60.5 225 26.2
BolC9t59601H Brassica oleracea HOM05D002679 ORTHO05D023662 2.3e-07 60.5 248 25.4
AL1G35530 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 3.0e-07 60.1 76 38.2
BolC8t47165H Brassica oleracea HOM05D002679 ORTHO05D010656 3.9e-07 59.7 76 39.5
BcaC09g52206 Brassica carinata HOM05D002666 ORTHO05D004769 5.0e-07 59.3 85 40.0
A01p08210 Brassica napus HOM05D002666 ORTHO05D004769 5.0e-07 59.3 214 29.0
A08p11010 Brassica napus HOM05D002666 ORTHO05D004769 5.0e-07 59.3 230 27.0
C01p09860 Brassica napus HOM05D002666 ORTHO05D004769 5.0e-07 59.3 85 40.0
BolC1t00948H Brassica oleracea HOM05D002666 ORTHO05D004769 5.0e-07 59.3 85 40.0
BraA01t00767Z Brassica rapa HOM05D002666 ORTHO05D004769 5.0e-07 59.3 214 29.0
BraA01t00797Z Brassica rapa HOM05D002666 ORTHO05D004769 5.0e-07 59.3 85 40.0
BcaC09g52198 Brassica carinata HOM05D002666 ORTHO05D004769 6.6e-07 58.9 196 28.1
BraA08t34400Z Brassica rapa HOM05D002666 ORTHO05D004769 6.6e-07 58.9 233 26.6
BraA01t00796Z Brassica rapa HOM05D002666 ORTHO05D004769 8.6e-07 58.5 227 29.5
AL3G49080 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.1e-06 58.2 80 41.2
AL3G52720 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.1e-06 58.2 80 41.2
BcaB03g13329 Brassica carinata HOM05D002679 ORTHO05D010656 1.1e-06 58.2 101 32.7
BcaC07g38414 Brassica carinata HOM05D002679 ORTHO05D010656 1.1e-06 58.2 77 39.0
C08p03630 Brassica napus HOM05D002679 ORTHO05D010656 1.1e-06 58.2 76 38.2
C08p11730 Brassica napus HOM05D002679 ORTHO05D010656 1.1e-06 58.2 77 39.0
BolC8t50310H Brassica oleracea HOM05D002679 ORTHO05D010656 1.1e-06 58.2 101 33.7
BcaB04g17448 Brassica carinata HOM05D002666 ORTHO05D014834 1.5e-06 57.8 128 34.4
C08p12080 Brassica napus HOM05D002679 ORTHO05D010656 1.5e-06 57.8 75 44.0
AL1G37710 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.9e-06 57.4 75 40.0
AL5G14060 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 1.9e-06 57.4 121 35.5
BcaC07g38441 Brassica carinata HOM05D002679 ORTHO05D010656 1.9e-06 57.4 77 37.7
BcaC09g51773 Brassica carinata HOM05D002666 ORTHO05D004769 1.9e-06 57.4 222 27.0
BcaNung01343 Brassica carinata HOM05D002666 ORTHO05D004769 1.9e-06 57.4 152 27.0
C08p12090 Brassica napus HOM05D002679 ORTHO05D010656 1.9e-06 57.4 77 37.7
BcaB01g00488 Brassica carinata HOM05D002679 ORTHO05D010656 2.5e-06 57.0 77 39.0
A07p13690 Brassica napus HOM05D002679 ORTHO05D010703 2.5e-06 57.0 75 38.7
BcaB03g14126 Brassica carinata HOM05D002679 ORTHO05D010703 3.3e-06 56.6 65 43.1
A10p28330 Brassica napus HOM05D002679 ORTHO05D023662 3.3e-06 56.6 112 31.2
C09p68590 Brassica napus HOM05D002679 ORTHO05D023662 3.3e-06 56.6 212 25.5
BcaNung01344 Brassica carinata HOM05D002666 ORTHO05D004769 4.3e-06 56.2 149 26.2
C02p61320 Brassica napus HOM05D002679 ORTHO05D012984 4.3e-06 56.2 113 31.0
C08p13850 Brassica napus HOM05D002679 ORTHO05D027393 4.3e-06 56.2 166 30.7
BolC8t49020H Brassica oleracea HOM05D002679 ORTHO05D027393 4.3e-06 56.2 166 30.7
A01p08260 Brassica napus HOM05D002666 ORTHO05D004769 7.3e-06 55.5 222 27.0
BraA08t35623Z Brassica rapa HOM05D002679 ORTHO05D010656 7.3e-06 55.5 101 30.7
BcaB03g13318 Brassica carinata HOM05D002679 ORTHO05D010656 9.5e-06 55.1 88 35.2
BraA01t00770Z Brassica rapa HOM05D002666 ORTHO05D004769 9.5e-06 55.1 222 27.0
CARHR272930 Cardamine hirsuta HOM05D002666 ORTHO05D004769 9.5e-06 55.1 66 45.5


User provided reference genes

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