Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p06960 Brassica napus HOM05D013859 ORTHO05D018433 4.0e-185 651.4 346 100.0
C02p06790 Brassica napus HOM05D013859 ORTHO05D018433 4.1e-182 641.3 346 98.8
C02p06850 Brassica napus HOM05D013859 ORTHO05D018433 2.2e-127 459.5 233 99.6
BcaC03g13485 Brassica carinata HOM05D013859 ORTHO05D018433 2.0e-91 340.1 190 91.6
A02p02550 Brassica napus HOM05D013859 ORTHO05D018433 1.5e-86 323.9 219 77.6
BraA02t05224Z Brassica rapa HOM05D013859 ORTHO05D018433 1.2e-83 314.3 226 74.8
A02p02560 Brassica napus HOM05D013859 ORTHO05D033360 8.2e-29 132.1 119 77.3
BraA02t05225Z Brassica rapa HOM05D013859 ORTHO05D033360 8.2e-29 132.1 119 77.3
AL7G36450 Arabidopsis lyrata HOM05D013859 ORTHO05D018433 3.1e-28 130.2 161 44.1
Carub.0007s2333 Capsella rubella HOM05D000344 ORTHO05D003292 2.5e-25 120.6 161 39.8
AL4G38000 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 4.8e-13 79.7 148 36.5
AL4G38030 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 6.3e-13 79.3 148 35.1
BcaC03g18354 Brassica carinata HOM05D000569 ORTHO05D000418 1.8e-12 77.8 41 92.7
C02p64320 Brassica napus HOM05D000569 ORTHO05D000418 1.8e-12 77.8 41 92.7
BolC8t47890H Brassica oleracea HOM05D011295 ORTHO05D014420 5.3e-12 76.3 149 37.6
BcaB02g09897 Brassica carinata HOM05D000569 ORTHO05D000418 9.1e-12 75.5 41 90.2
Thhalv10005299m.g Eutrema salsugineum HOM05D000569 ORTHO05D000418 9.1e-12 75.5 41 90.2
BcaC07g39853 Brassica carinata HOM05D008615 ORTHO05D011779 1.5e-11 74.7 156 30.8
BcaC01g02834 Brassica carinata HOM05D000569 ORTHO05D000418 2.0e-11 74.3 41 87.8
C03p59880 Brassica napus HOM05D000569 ORTHO05D000418 2.0e-11 74.3 41 87.8
BolC2t12496H Brassica oleracea HOM05D000569 ORTHO05D000418 2.0e-11 74.3 41 87.8
BolC3t18253H Brassica oleracea HOM05D000569 ORTHO05D000418 2.0e-11 74.3 41 87.8
CARHR279790 Cardamine hirsuta HOM05D000569 ORTHO05D000418 2.6e-11 73.9 41 87.8
A02p44070 Brassica napus HOM05D000569 ORTHO05D000418 4.5e-11 73.2 41 87.8
BraA02t09330Z Brassica rapa HOM05D000569 ORTHO05D000418 4.5e-11 73.2 41 87.8
AL8G43510 Arabidopsis lyrata HOM05D000569 ORTHO05D000418 5.9e-11 72.8 41 85.4
Carub.0008s2668 Capsella rubella HOM05D000569 ORTHO05D000418 1.3e-10 71.6 41 85.4
A06p32660 Brassica napus HOM05D000569 ORTHO05D000418 1.7e-10 71.2 41 85.4
BraA06t26194Z Brassica rapa HOM05D000569 ORTHO05D000418 1.7e-10 71.2 41 85.4
AT5G65790 Arabidopsis thaliana HOM05D000569 ORTHO05D000418 3.8e-10 70.1 41 82.9
BolC1t00941H Brassica oleracea HOM05D008615 ORTHO05D011779 5.0e-10 69.7 166 28.3
BolC8t50672H Brassica oleracea HOM05D008615 ORTHO05D011779 5.0e-10 69.7 167 28.7
BcaC09g52217 Brassica carinata HOM05D008615 ORTHO05D011779 6.5e-10 69.3 166 28.3
C01p09790 Brassica napus HOM05D008615 ORTHO05D011779 6.5e-10 69.3 166 28.3
BraA09t36568Z Brassica rapa HOM05D000569 ORTHO05D000418 8.5e-10 68.9 38 86.8
A03p58490 Brassica napus HOM05D008615 ORTHO05D021443 1.4e-09 68.2 91 42.9
BraA03t14910Z Brassica rapa HOM05D008615 ORTHO05D021443 1.9e-09 67.8 90 43.3
BcaC04g23247 Brassica carinata HOM05D000569 ORTHO05D000418 2.5e-09 67.4 38 86.8
C01p09880 Brassica napus HOM05D008615 ORTHO05D011779 2.5e-09 67.4 129 31.8
C09p10690 Brassica napus HOM05D000569 ORTHO05D000418 2.5e-09 67.4 38 86.8
BolC1t00951H Brassica oleracea HOM05D008615 ORTHO05D011779 2.5e-09 67.4 129 31.8
BolC9t53965H Brassica oleracea HOM05D000569 ORTHO05D000418 2.5e-09 67.4 38 86.8
A09p09160 Brassica napus HOM05D000569 ORTHO05D000418 3.2e-09 67.0 38 84.2
AL7G23550 Arabidopsis lyrata HOM05D008615 ORTHO05D021443 4.2e-09 66.6 94 38.3
BcaC09g52204 Brassica carinata HOM05D008615 ORTHO05D011779 4.2e-09 66.6 125 32.0
BraA01t00798Z Brassica rapa HOM05D008615 ORTHO05D011779 5.5e-09 66.2 129 31.0
BcaB04g20028 Brassica carinata HOM05D000569 ORTHO05D000418 6.1e-08 62.8 37 83.8
CARHR289120 Cardamine hirsuta HOM05D000129 ORTHO05D012460 6.1e-08 62.8 156 28.8
AT1G23935 Arabidopsis thaliana HOM05D000929 ORTHO05D038725 7.9e-08 62.4 157 30.6
AT3G19515 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 1.0e-07 62.0 165 27.3
AL7G22840 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.8e-07 61.2 84 34.5
BcaNung01345 Brassica carinata HOM05D008615 ORTHO05D021443 1.8e-07 61.2 93 35.5
Carub.0007s1099 Capsella rubella HOM05D008615 ORTHO05D011779 2.3e-07 60.8 98 30.6
AT1G22080 Arabidopsis thaliana HOM05D011295 ORTHO05D014420 3.9e-07 60.1 164 32.3
C08p13470 Brassica napus HOM05D017215 ORTHO05D031730 3.9e-07 60.1 133 31.6
BcaC06g35061 Brassica carinata HOM05D011295 ORTHO05D014420 8.8e-07 58.9 124 29.8
BcaC07g38550 Brassica carinata HOM05D017215 ORTHO05D031730 8.8e-07 58.9 133 31.6
Sp2g28880 Schrenkiella parvula HOM05D000569 ORTHO05D000418 8.8e-07 58.9 35 80.0
Thhalv10026918m.g Eutrema salsugineum HOM05D008615 ORTHO05D011779 1.1e-06 58.5 131 27.5
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 2.0e-06 57.8 128 30.5
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 4.4e-06 56.6 147 28.6
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 7.4e-06 55.8 106 31.1
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 7.4e-06 55.8 147 27.9


User provided reference genes

Program Settings