Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p06910 Brassica napus HOM05D002679 ORTHO05D011194 1.0e-81 306.6 149 100.0
BcaC03g13476 Brassica carinata HOM05D002679 ORTHO05D011194 2.1e-58 229.2 145 80.7
BcaC03g13479 Brassica carinata HOM05D002679 ORTHO05D011194 2.1e-58 229.2 145 80.7
BcaC03g13482 Brassica carinata HOM05D002679 ORTHO05D011194 2.1e-58 229.2 145 80.7
BolC2t06633H Brassica oleracea HOM05D002679 ORTHO05D011194 2.1e-58 229.2 145 80.7
C02p06820 Brassica napus HOM05D002679 ORTHO05D011194 3.6e-58 228.4 142 81.7
C02p06870 Brassica napus HOM05D002679 ORTHO05D011194 3.6e-58 228.4 142 81.7
C02p06990 Brassica napus HOM05D002679 ORTHO05D011194 3.6e-58 228.4 142 81.7
C02p07030 Brassica napus HOM05D002679 ORTHO05D011194 3.6e-58 228.4 142 81.7
BolC2t06631H Brassica oleracea HOM05D002679 ORTHO05D011194 3.6e-58 228.4 142 81.7
A02p02590 Brassica napus HOM05D018487 ORTHO05D011194 7.8e-53 210.7 142 75.4
BraA02t05227Z Brassica rapa HOM05D002679 ORTHO05D011194 7.8e-53 210.7 142 75.4
BcaC03g13483 Brassica carinata HOM05D002679 ORTHO05D011194 1.9e-51 206.1 142 73.9
C02p06800 Brassica napus HOM05D002679 ORTHO05D011194 3.3e-51 205.3 142 73.9
C02p06810 Brassica napus HOM05D002679 ORTHO05D011194 2.1e-50 202.6 142 73.2
BcaC03g13474 Brassica carinata HOM05D002679 ORTHO05D011194 2.6e-40 169.1 142 59.9
BolC2t12507H Brassica oleracea HOM05D002679 ORTHO05D011194 2.6e-40 169.1 142 60.6
C02p64430 Brassica napus HOM05D002679 ORTHO05D011194 9.9e-40 167.2 142 59.9
BolC2t06636H Brassica oleracea HOM05D002679 ORTHO05D011194 3.9e-36 155.2 107 75.7
C02p07050 Brassica napus HOM05D002679 ORTHO05D011194 3.5e-21 105.5 64 71.9
BcaC03g18368 Brassica carinata HOM05D002679 ORTHO05D011194 1.3e-20 103.6 87 62.1
BcaNung04303 Brassica carinata HOM05D002679 ORTHO05D011194 1.9e-19 99.8 97 54.6
Carub.0007s2335 Capsella rubella HOM05D002679 ORTHO05D011194 4.3e-19 98.6 134 43.3
AL7G36490 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 2.8e-18 95.9 133 45.9
AL7G36480 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.8e-17 93.2 134 44.0
AL7G36510 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.8e-17 93.2 134 44.0
BcaNung03139 Brassica carinata HOM05D002679 ORTHO05D011194 4.0e-17 92.0 83 56.6
Carub.0007s3636 Capsella rubella HOM05D002679 ORTHO05D011194 2.4e-14 82.8 144 38.9
Carub.0008s2459 Capsella rubella HOM05D002666 ORTHO05D004769 3.7e-10 68.9 137 32.8
AL108U10030 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 4.8e-10 68.6 140 34.3
Carub.0007s2334 Capsella rubella HOM05D002679 ORTHO05D011194 6.9e-09 64.7 95 40.0
AL7G36880 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 9.0e-09 64.3 89 43.8
AT3G19520 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 9.0e-09 64.3 131 35.9
AT1G19060 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 4.5e-08 62.0 136 36.8
BraA07t29124Z Brassica rapa HOM05D002679 ORTHO05D010703 4.5e-08 62.0 135 35.6
Carub.0008s0956 Capsella rubella HOM05D002666 ORTHO05D004769 4.5e-08 62.0 134 32.1
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 1.7e-07 60.1 140 33.6
Carub.0003s1934 Capsella rubella HOM05D002679 ORTHO05D010703 1.7e-07 60.1 131 35.9
Carub.0003s1935 Capsella rubella HOM05D002679 ORTHO05D010703 1.7e-07 60.1 131 35.9
Thhalv10028328m.g Eutrema salsugineum HOM05D002679 ORTHO05D012452 2.2e-07 59.7 120 36.7
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 6.4e-07 58.2 140 33.6
Carub.0001s2632 Capsella rubella HOM05D002679 ORTHO05D010703 6.4e-07 58.2 132 31.1
CARHR170750 Cardamine hirsuta HOM05D002679 ORTHO05D012311 6.4e-07 58.2 121 38.0
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 1.1e-06 57.4 146 31.5
Carub.0007s3406 Capsella rubella HOM05D002679 ORTHO05D012311 1.4e-06 57.0 132 37.1
Thhalv10004573m.g Eutrema salsugineum HOM05D002679 ORTHO05D014856 1.9e-06 56.6 126 35.7
A08p20500 Brassica napus HOM05D002666 ORTHO05D004769 2.4e-06 56.2 128 30.5
Carub.0007s3405 Capsella rubella HOM05D002679 ORTHO05D012311 3.2e-06 55.8 132 34.1
AL1G37670 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 5.5e-06 55.1 128 32.8
A08p11010 Brassica napus HOM05D002666 ORTHO05D004769 5.5e-06 55.1 128 29.7
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 7.1e-06 54.7 131 32.8
A01p08490 Brassica napus HOM05D002666 ORTHO05D004769 7.1e-06 54.7 145 32.4
BcaC01g00518 Brassica carinata HOM05D002666 ORTHO05D004769 9.3e-06 54.3 128 29.7
BcaC09g51773 Brassica carinata HOM05D002666 ORTHO05D004769 9.3e-06 54.3 120 30.8
BolC3t20342H Brassica oleracea HOM05D002666 ORTHO05D004769 9.3e-06 54.3 128 29.7
BraA01t00770Z Brassica rapa HOM05D002666 ORTHO05D004769 9.3e-06 54.3 120 35.0
BraA01t00771Z Brassica rapa HOM05D002666 ORTHO05D004769 9.3e-06 54.3 120 35.0
BraA08t34119Z Brassica rapa HOM05D002666 ORTHO05D004769 9.3e-06 54.3 128 29.7
BraA08t34123Z Brassica rapa HOM05D002666 ORTHO05D004769 9.3e-06 54.3 128 29.7


User provided reference genes

Program Settings