Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p06880 Brassica napus HOM05D002679 ORTHO05D011194 6.4e-60 233.8 112 100.0
C02p06990 Brassica napus HOM05D002679 ORTHO05D011194 8.4e-60 233.4 111 100.0
BolC2t06631H Brassica oleracea HOM05D002679 ORTHO05D011194 8.4e-60 233.4 111 100.0
C02p06820 Brassica napus HOM05D002679 ORTHO05D011194 4.2e-59 231.1 111 98.2
BolC2t06636H Brassica oleracea HOM05D002679 ORTHO05D011194 4.2e-59 231.1 111 98.2
BolC2t06624H Brassica oleracea HOM05D002679 ORTHO05D011194 2.1e-58 228.8 111 97.3
BcaC03g13483 Brassica carinata HOM05D002679 ORTHO05D011194 6.0e-58 227.3 111 95.5
C02p06810 Brassica napus HOM05D002679 ORTHO05D011194 1.8e-57 225.7 111 94.6
C02p07030 Brassica napus HOM05D002679 ORTHO05D011194 1.1e-56 223.0 111 94.6
BcaC03g13479 Brassica carinata HOM05D002679 ORTHO05D011194 9.6e-56 219.9 111 94.6
BraA02t05227Z Brassica rapa HOM05D002679 ORTHO05D011194 6.2e-55 217.2 111 91.0
BolC2t06633H Brassica oleracea HOM05D002679 ORTHO05D011194 1.2e-53 213.0 122 85.2
A02p02590 Brassica napus HOM05D018487 ORTHO05D011194 4.8e-47 191.0 96 91.7
C02p64430 Brassica napus HOM05D002679 ORTHO05D011194 2.9e-44 181.8 104 80.8
BolC2t12507H Brassica oleracea HOM05D002679 ORTHO05D011194 2.9e-44 181.8 104 80.8
BcaC03g13482 Brassica carinata HOM05D002679 ORTHO05D011194 2.2e-39 165.6 84 92.9
BcaNung04303 Brassica carinata HOM05D002679 ORTHO05D011194 3.7e-39 164.9 111 70.3
C02p07050 Brassica napus HOM05D002679 ORTHO05D011194 1.1e-35 153.3 107 71.0
BolC2t06639H Brassica oleracea HOM05D018487 ORTHO05D023974 1.1e-35 153.3 107 71.0
C02p06800 Brassica napus HOM05D002679 ORTHO05D011194 6.1e-34 147.5 78 87.2
BcaC03g18368 Brassica carinata HOM05D002679 ORTHO05D011194 6.3e-31 137.5 78 82.1
C02p06920 Brassica napus HOM05D002679 ORTHO05D011194 3.9e-25 118.2 55 98.2
AT4G17700 Arabidopsis thaliana HOM05D002679 ORTHO05D011194 2.6e-21 105.5 98 51.0
Carub.0007s2334 Capsella rubella HOM05D002679 ORTHO05D011194 6.5e-20 100.9 94 52.1
Thhalv10009541m.g Eutrema salsugineum HOM05D002679 ORTHO05D011194 6.5e-20 100.9 99 43.4
Thhalv10009919m.g Eutrema salsugineum HOM05D002679 ORTHO05D011194 6.5e-20 100.9 99 43.4
Carub.0007s3636 Capsella rubella HOM05D002679 ORTHO05D011194 1.6e-18 96.3 91 49.5
AL7G36490 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 1.8e-17 92.8 102 50.0
AL7G36510 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 2.3e-17 92.4 116 46.6
AL7G36480 Arabidopsis lyrata HOM05D002679 ORTHO05D011194 5.2e-17 91.3 98 50.0
Carub.0007s2335 Capsella rubella HOM05D002679 ORTHO05D011194 5.7e-16 87.8 97 47.4
AT4G17990 Arabidopsis thaliana HOM05D002679 ORTHO05D011194 1.7e-15 86.3 103 47.6
BcaC07g38546 Brassica carinata HOM05D002679 ORTHO05D024283 1.5e-11 73.2 98 39.8
BolC8t48984H Brassica oleracea HOM05D002679 ORTHO05D024283 1.5e-11 73.2 98 39.8
BcaC03g13474 Brassica carinata HOM05D002679 ORTHO05D011194 1.2e-10 70.1 41 78.0
C05p24780 Brassica napus HOM05D002679 ORTHO05D012311 1.2e-10 70.1 96 40.6
BolC5t31206H Brassica oleracea HOM05D002679 ORTHO05D012311 2.1e-10 69.3 96 39.6
A02p37800 Brassica napus HOM05D002679 ORTHO05D012984 2.7e-10 68.9 92 38.0
BraA02t08763Z Brassica rapa HOM05D002679 ORTHO05D012984 2.7e-10 68.9 92 38.0
C08p13490 Brassica napus HOM05D002679 ORTHO05D024283 4.7e-10 68.2 95 38.9
BcaC03g17689 Brassica carinata HOM05D002679 ORTHO05D012984 6.1e-10 67.8 92 38.0
A09p39720 Brassica napus HOM05D002679 ORTHO05D012311 6.1e-10 67.8 96 39.6
C02p56980 Brassica napus HOM05D002679 ORTHO05D012984 6.1e-10 67.8 92 38.0
BraA09t39471Z Brassica rapa HOM05D002679 ORTHO05D012311 8.0e-10 67.4 95 38.9
BraA09t39473Z Brassica rapa HOM05D002679 ORTHO05D012311 8.0e-10 67.4 94 38.3
BcaC05g26430 Brassica carinata HOM05D002679 ORTHO05D012311 1.0e-09 67.0 96 38.5
AL108U10030 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 1.4e-09 66.6 102 37.3
BcaC08g43156 Brassica carinata HOM05D002679 ORTHO05D012311 2.3e-09 65.9 94 38.3
C06p04390 Brassica napus HOM05D002679 ORTHO05D012311 2.3e-09 65.9 94 38.3
BolC6t35570H Brassica oleracea HOM05D002679 ORTHO05D012311 2.3e-09 65.9 94 38.3
Carub.0007s3405 Capsella rubella HOM05D002679 ORTHO05D012311 2.3e-09 65.9 89 36.0
CARHR028040 Cardamine hirsuta HOM05D002679 ORTHO05D010703 2.3e-09 65.9 96 34.4
BcaC07g38549 Brassica carinata HOM05D001056 ORTHO05D000902 3.0e-09 65.5 92 39.1
Thhalv10028156m.g Eutrema salsugineum HOM05D002679 ORTHO05D010656 3.0e-09 65.5 60 50.0
BcaC07g38618 Brassica carinata HOM05D002679 ORTHO05D027393 6.8e-09 64.3 91 39.6
BolC2t11767H Brassica oleracea HOM05D002679 ORTHO05D012984 6.8e-09 64.3 92 37.0
BcaC03g17685 Brassica carinata HOM05D002679 ORTHO05D012984 1.2e-08 63.5 99 37.4
A08p34130 Brassica napus HOM05D002679 ORTHO05D024283 1.2e-08 63.5 90 38.9
BNapus_Darmor_BZH_scaffold_167p00040 Brassica napus HOM05D002679 ORTHO05D014856 1.2e-08 63.5 98 34.7
C02p56940 Brassica napus HOM05D002679 ORTHO05D012984 1.2e-08 63.5 99 37.4
BolC2t11763H Brassica oleracea HOM05D002679 ORTHO05D012984 1.2e-08 63.5 99 37.4
BraA08t35325Z Brassica rapa HOM05D002679 ORTHO05D024283 1.2e-08 63.5 90 38.9
AL7G47200 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.5e-08 63.2 95 34.7
BolC1t05512H Brassica oleracea HOM05D002679 ORTHO05D014856 1.5e-08 63.2 67 40.3
BcaC07g38579 Brassica carinata HOM05D002679 ORTHO05D027393 2.0e-08 62.8 112 37.5
BcaC09g47966 Brassica carinata HOM05D002679 ORTHO05D014856 2.0e-08 62.8 67 40.3
AT1G23970 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 3.4e-08 62.0 107 31.8
BcaB07g34162 Brassica carinata HOM05D002679 ORTHO05D012984 3.4e-08 62.0 84 40.5
CARHR170750 Cardamine hirsuta HOM05D002679 ORTHO05D012311 7.5e-08 60.8 87 33.3
BcaC06g33274 Brassica carinata HOM05D002679 ORTHO05D012452 1.3e-07 60.1 53 45.3
BraA01t04335Z Brassica rapa HOM05D002679 ORTHO05D014856 1.7e-07 59.7 95 33.7
AT1G23950 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 2.2e-07 59.3 108 32.4
BcaB03g14132 Brassica carinata HOM05D002679 ORTHO05D010703 2.2e-07 59.3 98 30.6
AL5G14060 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 2.8e-07 58.9 95 32.6
AL8G40780 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 3.7e-07 58.5 98 31.6
A07p13740 Brassica napus HOM05D002679 ORTHO05D010703 3.7e-07 58.5 110 29.1
C05p43390 Brassica napus HOM05D002679 ORTHO05D010703 3.7e-07 58.5 96 32.3
BolC8t49020H Brassica oleracea HOM05D002679 ORTHO05D027393 3.7e-07 58.5 79 43.0
AL1G37720 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 4.8e-07 58.2 107 29.0
AL5G38700 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 4.8e-07 58.2 90 32.2
BcaC06g35072 Brassica carinata HOM05D002679 ORTHO05D010703 4.8e-07 58.2 102 30.4
C05p59700 Brassica napus HOM05D002679 ORTHO05D032648 4.8e-07 58.2 93 34.4
BolC5t34624H Brassica oleracea HOM05D002679 ORTHO05D032648 4.8e-07 58.2 93 34.4
Thhalv10027826m.g Eutrema salsugineum HOM05D002679 ORTHO05D012311 6.3e-07 57.8 57 43.9
AT1G02770 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 8.3e-07 57.4 111 31.5
BcaB04g21259 Brassica carinata HOM05D002679 ORTHO05D014856 8.3e-07 57.4 54 42.6
Carub.0007s3406 Capsella rubella HOM05D002679 ORTHO05D012311 1.1e-06 57.0 102 29.4
BcaB03g14126 Brassica carinata HOM05D002679 ORTHO05D010703 1.8e-06 56.2 97 29.9
C06p20110 Brassica napus HOM05D002679 ORTHO05D010656 2.4e-06 55.8 56 39.3
BolC6t37193H Brassica oleracea HOM05D002679 ORTHO05D010656 2.4e-06 55.8 56 39.3
Thhalv10004573m.g Eutrema salsugineum HOM05D002679 ORTHO05D014856 2.4e-06 55.8 114 29.8
BcaB03g14130 Brassica carinata HOM05D002679 ORTHO05D010703 3.1e-06 55.5 97 30.9
BcaNung01346 Brassica carinata HOM05D002666 ORTHO05D004769 3.1e-06 55.5 91 37.4
C08p13850 Brassica napus HOM05D002679 ORTHO05D027393 3.1e-06 55.5 79 40.5
BcaC02g12340 Brassica carinata HOM05D002679 ORTHO05D014105 7.0e-06 54.3 80 33.8
Carub.0001s2694 Capsella rubella HOM05D002679 ORTHO05D010703 7.0e-06 54.3 107 31.8
AL1G56900 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 9.1e-06 53.9 53 41.5
Carub.0001s2342 Capsella rubella HOM05D002679 ORTHO05D010703 9.1e-06 53.9 96 28.1


User provided reference genes

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