Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 2.4e-31 138.3 74 100.0
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 7.8e-30 133.3 76 97.4
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 7.8e-30 133.3 76 97.4
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 6.6e-29 130.2 76 96.1
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 6.6e-29 130.2 76 96.1
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 9.6e-28 126.3 76 92.1
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 3.6e-27 124.4 76 90.8
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 1.1e-26 122.9 76 88.2
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 1.4e-26 122.5 76 88.2
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 1.4e-26 122.5 76 88.2
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 1.4e-26 122.5 76 88.2
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 3.1e-26 121.3 76 86.8
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 3.1e-26 121.3 76 86.8
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 4.0e-26 120.9 77 89.6
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 6.9e-26 120.2 65 96.9
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 9.0e-26 119.8 77 87.0
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 3.4e-25 117.9 76 86.8
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 4.2e-23 110.9 76 78.9
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 9.3e-23 109.8 73 76.7
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 2.1e-22 108.6 76 75.0
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 4.6e-22 107.5 76 73.7
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 7.8e-22 106.7 73 74.0
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 1.0e-21 106.3 74 77.0
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 2.3e-21 105.1 74 75.7
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 2.3e-21 105.1 74 75.7
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 6.6e-21 103.6 73 74.0
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 1.1e-20 102.8 76 71.1
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.1e-20 102.8 74 73.0
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 2.5e-20 101.7 67 74.6
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 5.6e-20 100.5 74 73.0
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 5.6e-20 100.5 66 77.3
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 5.6e-20 100.5 66 77.3
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 5.6e-20 100.5 66 77.3
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 7.3e-20 100.1 74 73.0
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 9.6e-20 99.8 73 71.2
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 1.3e-19 99.4 73 69.9
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.6e-19 99.0 73 71.2
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 1.6e-19 99.0 73 69.9
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 2.8e-19 98.2 66 77.3
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.6e-19 97.8 73 71.2
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 3.6e-19 97.8 73 71.2
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 8.1e-19 96.7 73 65.8
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.4e-18 95.9 74 67.6
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 2.4e-18 95.1 79 72.2
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 3.1e-18 94.7 73 68.5
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 5.3e-18 94.0 65 70.8
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 6.9e-18 93.6 74 66.2
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 6.9e-18 93.6 71 64.8
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.2e-17 92.8 72 68.1
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 1.5e-17 92.4 71 70.4
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 2.0e-17 92.0 64 70.3
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 2.6e-17 91.7 73 61.6
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 3.4e-17 91.3 72 63.9
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 3.4e-17 91.3 73 68.5
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 4.5e-17 90.9 73 68.5
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 4.5e-17 90.9 73 68.5
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 7.6e-17 90.1 65 66.2
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 7.6e-17 90.1 65 66.2
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 9.9e-17 89.7 71 67.6
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 9.9e-17 89.7 74 62.2
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 9.9e-17 89.7 71 64.8
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 9.9e-17 89.7 73 67.1
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 1.3e-16 89.4 72 66.7
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 1.3e-16 89.4 72 65.3
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 1.3e-16 89.4 76 64.5
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.7e-16 89.0 73 67.1
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 2.2e-16 88.6 73 68.5
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 2.2e-16 88.6 73 68.5
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 2.9e-16 88.2 71 63.4
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 3.8e-16 87.8 71 63.4
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 3.8e-16 87.8 71 63.4
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 3.8e-16 87.8 71 63.4
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 4.9e-16 87.4 73 68.5
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.9e-16 87.4 73 68.5
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.9e-16 87.4 73 68.5
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 4.9e-16 87.4 73 68.5
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 4.9e-16 87.4 74 60.8
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.9e-16 87.4 73 69.9
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.9e-16 87.4 73 69.9
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 6.4e-16 87.0 66 72.7
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 8.4e-16 86.7 73 64.4
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.1e-15 86.3 71 63.4
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 1.1e-15 86.3 71 60.6
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 1.1e-15 86.3 74 63.5
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.1e-15 86.3 71 60.6
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 1.9e-15 85.5 71 62.0
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.9e-15 85.5 70 62.9
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 2.4e-15 85.1 72 63.9
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 2.4e-15 85.1 73 65.8
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 2.4e-15 85.1 71 60.6
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 2.4e-15 85.1 73 64.4
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 2.4e-15 85.1 71 64.8
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 2.4e-15 85.1 71 62.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 2.4e-15 85.1 71 62.0
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 3.2e-15 84.7 73 56.2
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 3.2e-15 84.7 74 56.8
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 4.2e-15 84.3 64 64.1
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 4.2e-15 84.3 64 57.8
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 4.2e-15 84.3 73 57.5
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 4.2e-15 84.3 74 60.8
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 5.4e-15 84.0 71 57.7
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 7.1e-15 83.6 71 59.2
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 7.1e-15 83.6 52 76.9
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 7.1e-15 83.6 65 66.2
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 7.1e-15 83.6 56 73.2
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 1.6e-14 82.4 65 64.6
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 1.6e-14 82.4 74 58.1
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 1.6e-14 82.4 73 61.6
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 2.1e-14 82.0 71 62.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 2.7e-14 81.6 70 60.0
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 2.7e-14 81.6 127 42.5
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 3.5e-14 81.3 70 58.6
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 3.5e-14 81.3 76 60.5
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 3.5e-14 81.3 73 58.9
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 3.5e-14 81.3 73 63.0
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 3.5e-14 81.3 71 57.7
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 4.6e-14 80.9 71 57.7
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 4.6e-14 80.9 73 60.3
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 6.0e-14 80.5 73 64.4
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 7.9e-14 80.1 71 60.6
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 7.9e-14 80.1 74 59.5
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 3.0e-13 78.2 51 76.5
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 3.0e-13 78.2 66 54.5
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 6.7e-13 77.0 50 76.0
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 1.5e-12 75.9 72 55.6
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 1.6e-11 72.4 72 54.2
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 1.1e-10 69.7 50 66.0
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 1.8e-10 68.9 62 51.6
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 6.9e-10 67.0 73 52.1
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 9.0e-10 66.6 51 58.8
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 5.8e-09 63.9 57 56.1
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 2.2e-08 62.0 59 52.5
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.2e-08 62.0 54 55.6
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 3.2e-07 58.2 62 58.1


User provided reference genes

Program Settings