Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 4.0e-114 414.8 222 100.0
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 4.5e-113 411.4 222 99.1
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 2.9e-112 408.7 222 98.2
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 6.5e-112 407.5 222 98.6
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 5.5e-111 404.4 222 98.2
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 3.5e-110 401.7 219 97.3
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 5.7e-108 394.4 219 95.0
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 3.4e-105 385.2 222 94.6
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 4.5e-105 384.8 222 94.6
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 4.5e-105 384.8 222 94.6
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.3e-104 383.3 219 87.7
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 1.3e-104 383.3 222 91.9
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 1.3e-104 383.3 222 91.9
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 2.9e-104 382.1 219 87.7
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 3.8e-104 381.7 219 87.7
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 1.6e-102 376.3 219 91.8
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 3.4e-97 358.6 218 82.6
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 6.7e-93 344.4 218 78.4
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 8.5e-88 327.4 219 78.1
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 1.2e-78 297.0 227 69.6
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.2e-78 297.0 227 70.0
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 4.7e-78 295.0 227 69.6
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.8e-77 293.1 227 69.2
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 6.7e-77 291.2 224 67.9
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 6.7e-77 291.2 227 67.0
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 2.6e-76 289.3 225 71.6
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 7.5e-76 287.7 224 69.6
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 3.7e-75 285.4 221 70.6
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 3.7e-75 285.4 225 70.2
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.4e-74 283.5 190 75.3
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 2.4e-74 282.7 232 66.4
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 5.3e-74 281.6 230 67.0
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 7.0e-74 281.2 230 61.3
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 9.1e-74 280.8 232 68.5
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 9.1e-74 280.8 230 66.1
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 1.6e-73 280.0 222 68.0
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 4.5e-73 278.5 229 62.0
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 7.7e-73 277.7 229 61.1
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 1.7e-72 276.6 215 64.2
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 2.2e-72 276.2 186 69.4
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 2.9e-72 275.8 198 72.2
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 6.5e-72 274.6 221 69.7
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 6.5e-72 274.6 229 61.6
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 6.5e-72 274.6 222 68.5
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 6.5e-72 274.6 220 65.9
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 8.5e-72 274.2 229 63.3
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 2.5e-71 272.7 229 61.1
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 3.2e-71 272.3 229 60.7
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 3.2e-71 272.3 224 68.8
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 3.2e-71 272.3 231 61.0
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 3.2e-71 272.3 231 61.0
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 4.2e-71 271.9 226 61.1
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 4.2e-71 271.9 194 70.6
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 5.5e-71 271.6 227 65.6
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 5.5e-71 271.6 193 68.4
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 7.2e-71 271.2 223 68.6
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 7.2e-71 271.2 213 62.9
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 7.2e-71 271.2 220 68.6
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 7.2e-71 271.2 231 61.0
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 1.2e-70 270.4 222 67.6
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 1.2e-70 270.4 225 67.6
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 1.6e-70 270.0 229 63.8
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 1.6e-70 270.0 203 64.5
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 1.6e-70 270.0 226 67.3
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 2.1e-70 269.6 219 66.7
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 2.1e-70 269.6 180 76.7
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 2.1e-70 269.6 188 73.4
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 2.7e-70 269.2 185 75.1
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 3.6e-70 268.9 225 67.6
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 6.1e-70 268.1 224 67.4
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 6.1e-70 268.1 180 69.4
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.0e-69 267.3 207 64.3
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 1.0e-69 267.3 192 74.5
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 1.0e-69 267.3 183 68.3
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.0e-69 267.3 222 63.5
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 1.0e-69 267.3 232 60.3
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.4e-69 266.9 225 65.3
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 1.4e-69 266.9 224 63.8
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 1.4e-69 266.9 198 72.7
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 2.3e-69 266.2 202 72.8
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 3.0e-69 265.8 225 65.3
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 6.8e-69 264.6 179 68.2
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.2e-68 263.8 207 63.3
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 1.2e-68 263.8 209 67.0
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.2e-68 263.8 223 65.5
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 7.5e-68 261.2 225 58.7
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 2.8e-67 259.2 209 62.7
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 2.8e-67 259.2 211 67.3
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 4.8e-67 258.5 203 65.5
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 6.3e-67 258.1 214 66.4
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 1.4e-66 256.9 228 66.2
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 9.1e-66 254.2 228 58.8
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 2.7e-65 252.7 179 72.1
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 3.5e-65 252.3 184 69.6
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 2.9e-64 249.2 230 56.1
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 8.5e-64 247.7 182 69.8
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.5e-63 246.9 181 71.8
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 9.5e-63 244.2 203 66.0
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 9.5e-63 244.2 194 67.5
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 1.2e-62 243.8 180 70.6
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 6.1e-62 241.5 180 71.7
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 8.0e-62 241.1 203 66.0
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.8e-61 240.0 189 67.2
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 3.7e-59 232.3 181 68.5
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 1.7e-56 223.4 180 63.3
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 3.0e-53 212.6 171 66.1
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 2.9e-51 206.1 139 70.5
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 2.7e-49 199.5 142 65.5
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 6.6e-48 194.9 108 100.0
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 6.6e-48 194.9 134 67.2
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 8.6e-48 194.5 142 63.4
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 1.1e-47 194.1 142 63.4
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 1.9e-47 193.4 142 63.4
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 1.9e-47 193.4 142 63.4
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 1.9e-47 193.4 142 63.4
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 2.5e-47 193.0 142 63.4
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 2.5e-47 193.0 142 63.4
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.5e-47 193.0 142 62.7
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 5.6e-47 191.8 141 63.1
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 5.6e-47 191.8 142 62.7
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 5.6e-47 191.8 142 62.7
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.6e-46 190.3 142 62.7
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 2.1e-46 189.9 142 62.7
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 3.6e-46 189.1 140 62.1
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 3.2e-42 176.0 142 56.3
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 4.1e-42 175.6 184 52.7
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 1.1e-39 167.5 159 50.3
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 3.6e-38 162.5 219 45.7
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.4e-37 160.6 102 76.5
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 2.3e-37 159.8 132 75.0
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 3.5e-33 146.0 175 43.4
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 2.8e-30 136.3 107 70.1
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 7.6e-28 128.3 154 43.5
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.3e-27 127.5 219 43.4
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 2.2e-27 126.7 152 42.1
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 3.8e-27 125.9 129 54.3
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 4.1e-26 122.5 152 42.8
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.0e-24 117.9 196 36.7
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 2.6e-20 103.2 181 37.0
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 5.8e-20 102.1 227 40.5
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 1.7e-19 100.5 89 55.1
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 1.7e-19 100.5 71 63.4
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 1.4e-18 97.4 92 54.3
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.4e-18 97.4 147 34.0
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 2.4e-18 96.7 197 32.5
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 3.2e-18 96.3 170 33.5
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 6.6e-16 88.6 59 72.9
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.6e-14 82.8 95 46.3
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 5.8e-12 75.5 110 37.3
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 2.4e-10 70.1 48 70.8


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