Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13383 Brassica carinata HOM05D007429 ORTHO05D003505 1.0e-42 176.4 94 100.0
C02p05300 Brassica napus HOM05D007429 ORTHO05D003505 1.0e-42 176.4 94 100.0
BolC2t06478H Brassica oleracea HOM05D007429 ORTHO05D003505 1.0e-42 176.4 94 100.0
A02p01120 Brassica napus HOM05D007429 ORTHO05D003505 3.0e-42 174.9 94 98.9
BraA02t05091Z Brassica rapa HOM05D007429 ORTHO05D003505 3.0e-42 174.9 94 98.9
BcaB08g37037 Brassica carinata HOM05D007429 ORTHO05D003505 2.1e-40 168.7 94 95.7
A10p26140 Brassica napus HOM05D007429 ORTHO05D003505 1.1e-39 166.4 94 94.7
BraA10t44673Z Brassica rapa HOM05D007429 ORTHO05D003505 1.1e-39 166.4 94 94.7
Sp6g31990 Schrenkiella parvula HOM05D007429 ORTHO05D003505 3.1e-39 164.9 94 92.6
C09p65190 Brassica napus HOM05D007429 ORTHO05D003505 4.0e-39 164.5 94 93.6
Carub.0006s1011 Capsella rubella HOM05D007429 ORTHO05D003505 4.0e-39 164.5 94 91.5
AL6G22340 Arabidopsis lyrata HOM05D007429 ORTHO05D003505 2.6e-38 161.8 94 90.4
BcaC04g19209 Brassica carinata HOM05D007429 ORTHO05D003505 3.4e-38 161.4 94 92.6
BolC9t59348H Brassica oleracea HOM05D007429 ORTHO05D003505 3.4e-38 161.4 94 92.6
AT5G11630 Arabidopsis thaliana HOM05D007429 ORTHO05D003505 2.2e-37 158.7 94 87.2
Thhalv10015136m.g Eutrema salsugineum HOM05D007429 ORTHO05D003505 1.9e-33 145.6 83 94.0
CARHR201590 Cardamine hirsuta HOM05D007429 ORTHO05D003505 9.6e-33 143.3 83 91.6
Aa31LG3G15560 Aethionema arabicum HOM05D007429 ORTHO05D003505 4.8e-32 141.0 94 80.9
THA.LOC104811265 Tarenaya hassleriana HOM05D007429 ORTHO05D003505 8.4e-29 130.2 94 75.5
Gorai.009G049400 Gossypium raimondii HOM05D007429 ORTHO05D003505 8.7e-26 120.2 94 70.2
Sabra06G0186000 Salix brachista HOM05D007429 ORTHO05D003505 8.7e-26 120.2 94 68.1
Thecc.09G045900 Theobroma cacao HOM05D007429 ORTHO05D003505 8.7e-26 120.2 94 69.1
Potri.006G237800 Populus trichocarpa HOM05D007429 ORTHO05D003505 2.5e-25 118.6 94 67.0
CARHR187590 Cardamine hirsuta HOM05D007429 ORTHO05D003505 4.3e-25 117.9 94 75.5
Duzib187G1405 Durio zibethinus HOM05D007429 ORTHO05D003505 9.6e-25 116.7 94 66.0
Thhalv10005203m.g Eutrema salsugineum HOM05D007429 ORTHO05D003505 8.2e-24 113.6 94 73.4
ClCG11G015140 Citrullus lanatus HOM05D007429 ORTHO05D003505 4.0e-23 111.3 94 64.9
MELO3C003465.2 Cucumis melo HOM05D007429 ORTHO05D003505 4.0e-23 111.3 94 66.0
CsaV3_3G048540 Cucumis sativus L. HOM05D007429 ORTHO05D003505 5.3e-23 110.9 94 64.9
MD15G1092600 Malus domestica HOM05D007429 ORTHO05D003505 1.2e-22 109.8 94 66.0
Dinv23374 Davidia involucrata HOM05D007429 ORTHO05D003505 2.0e-22 109.0 94 63.8
MD08G1113300 Malus domestica HOM05D007429 ORTHO05D003505 2.0e-22 109.0 94 66.0
Sopen08g020350 Solanum pennellii HOM05D007429 ORTHO05D003505 1.3e-21 106.3 94 63.8
Atru.chr7.2081 Acer truncatum HOM05D007429 ORTHO05D003505 2.2e-21 105.5 96 61.5
Gohir.D08G270600 Gossypium hirsutum HOM05D007429 ORTHO05D003505 2.2e-21 105.5 95 62.1
Sabra06G0186100 Salix brachista HOM05D008609 ORTHO05D010987 2.9e-21 105.1 88 67.0
TWI34G0747 Tripterygium wilfordii HOM05D007429 ORTHO05D003505 2.9e-21 105.1 94 62.8
Eucgr.C00555 Eucalyptus grandis HOM05D007429 ORTHO05D003505 4.9e-21 104.4 94 59.6
Eucgr.C00601 Eucalyptus grandis HOM05D007429 ORTHO05D003505 4.9e-21 104.4 94 59.6
PGSC0003DMG402029142 Solanum tuberosum HOM05D007429 ORTHO05D003505 4.9e-21 104.4 94 62.8
Cfa013372 Carpinus fangiana HOM05D007429 ORTHO05D003505 6.5e-21 104.0 96 61.5
RcHm_v2.0_Chr6g0306421 Rosa chinensis HOM05D007429 ORTHO05D003505 6.5e-21 104.0 94 63.8
Gohir.D05G048100 Gossypium hirsutum HOM05D007429 ORTHO05D003505 1.1e-20 103.2 85 68.2
Solyc08g066520.3 Solanum lycopersicum HOM05D007429 ORTHO05D003505 1.4e-20 102.8 92 62.0
CiPaw.08G026200 Carya illinoinensis HOM05D007429 ORTHO05D003505 2.5e-20 102.1 96 59.4
Gohir.A05G046400 Gossypium hirsutum HOM05D007429 ORTHO05D003505 2.5e-20 102.1 83 69.9
Medtr3g109720 Medicago truncatula HOM05D007429 ORTHO05D003505 2.5e-20 102.1 94 61.7
CSS0002972 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 3.2e-20 101.7 94 60.6
Actinidia13337 Actinidia chinensis HOM05D007429 ORTHO05D003505 4.2e-20 101.3 96 61.5
Prupe.1G447500 Prunus persica HOM05D007429 ORTHO05D003505 7.1e-20 100.5 83 67.5
Lj1g0025254 Lotus japonicus HOM05D007429 ORTHO05D003505 1.2e-19 99.8 94 58.5
Glyma.06G086300 Glycine max HOM05D007429 ORTHO05D003505 1.6e-19 99.4 95 64.2
TPR.G15111 Trifolium pratense HOM05D007429 ORTHO05D003505 1.6e-19 99.4 94 60.6
Manes.16G075000 Manihot esculenta HOM05D007429 ORTHO05D003505 3.5e-19 98.2 101 58.4
FAN27G3027 Fragaria x ananassa HOM05D007429 ORTHO05D003505 1.0e-18 96.7 95 61.1
Hund19504 Selenicereus undatus HOM05D007429 ORTHO05D003505 1.0e-18 96.7 95 61.1
Oeu030718.1 Olea europaea HOM05D007429 ORTHO05D003505 2.3e-18 95.5 95 57.9
Sc09g0009340 Simmondsia chinensis HOM05D007429 ORTHO05D003505 2.3e-18 95.5 94 57.4
EL10Ac2g04004 Beta vulgaris HOM05D007429 ORTHO05D003505 5.1e-18 94.4 97 57.7
Sed0003359 Sechium edule HOM05D007429 ORTHO05D003505 5.1e-18 94.4 85 62.4
Glyma.04G084800 Glycine max HOM05D007429 ORTHO05D003505 6.7e-18 94.0 95 63.2
Duzib168G1390 Durio zibethinus HOM05D007429 ORTHO05D003505 1.5e-17 92.8 83 63.9
Phvul.009G110300 Phaseolus vulgaris HOM05D007429 ORTHO05D003505 1.5e-17 92.8 95 58.9
Actinidia14679 Actinidia chinensis HOM05D007429 ORTHO05D003505 1.9e-17 92.4 94 58.5
Gohir.A08G249800 Gossypium hirsutum HOM05D007429 ORTHO05D003505 3.3e-17 91.7 84 63.1
Cc08_g09700 Coffea canephora HOM05D007429 ORTHO05D003505 7.4e-17 90.5 85 61.2
AUR62009266 Chenopodium quinoa HOM05D007429 ORTHO05D003505 9.7e-17 90.1 95 56.8
AUR62042440 Chenopodium quinoa HOM05D007429 ORTHO05D003505 9.7e-17 90.1 95 56.8
Dinv27908 Davidia involucrata HOM05D007429 ORTHO05D003505 9.7e-17 90.1 94 55.3
Migut.E01531 Erythranthe guttata HOM05D007429 ORTHO05D003505 9.7e-17 90.1 95 57.9
TWI63G1379 Tripterygium wilfordii HOM05D007429 ORTHO05D003505 9.7e-17 90.1 84 64.3
CSS0037511 Camellia sinensis var. sinensis HOM05D007429 ORTHO05D003505 3.7e-16 88.2 99 55.6
FvH4_2g35460 Fragaria vesca HOM05D007429 ORTHO05D003505 8.2e-16 87.0 84 60.7
HanXRQChr02g0050601 Helianthus annuus HOM05D007429 ORTHO05D003505 8.2e-16 87.0 96 56.2
FAN20G1676 Fragaria x ananassa HOM05D002792 ORTHO05D003039 1.8e-15 85.9 89 59.6
arahy.Tifrunner.gnm1.ann1.ZH3G1A Arachis hypogaea HOM05D007429 ORTHO05D003505 2.4e-15 85.5 118 45.8
Nn8g39115 Nelumbo nucifera HOM05D007429 ORTHO05D003505 2.4e-15 85.5 86 59.3
Ciclev10010039m.g Citrus clementina HOM05D007429 ORTHO05D003505 3.1e-15 85.1 83 59.0
Lsat_1_v5_gn_6_22640 Lactuca sativa HOM05D007429 ORTHO05D003505 4.1e-15 84.7 94 54.3
Aqoxy7G01463 Aquilegia oxysepala HOM05D007429 ORTHO05D003505 5.3e-15 84.3 102 53.9
DCAR_000754 Daucus carota HOM05D002792 ORTHO05D003039 5.3e-15 84.3 51 82.4
PSO173G0075 Papaver somniferum HOM05D007429 ORTHO05D003505 5.3e-15 84.3 83 57.8
arahy.Tifrunner.gnm1.ann1.R0MHDP Arachis hypogaea HOM05D007429 ORTHO05D003505 6.9e-15 84.0 118 46.6
Nn6g35292 Nelumbo nucifera HOM05D007429 ORTHO05D003505 1.2e-14 83.2 83 56.6
PSO824G0083 Papaver somniferum HOM05D007429 ORTHO05D003505 1.2e-14 83.2 83 56.6
SGA_v2.0_scaffold163G38070 Striga asiatica HOM05D007429 ORTHO05D003505 1.5e-14 82.8 131 42.0
CiPaw.07G203700 Carya illinoinensis HOM05D007429 ORTHO05D003505 3.4e-14 81.6 86 60.5
PGR031G3761 Punica granatum HOM05D007429 ORTHO05D003505 5.9e-14 80.9 89 58.4
ECA233G1441 Erigeron canadensis HOM05D007429 ORTHO05D003505 7.7e-14 80.5 95 50.5
Gorai.004G288500 Gossypium raimondii HOM05D007429 ORTHO05D003505 1.0e-13 80.1 78 59.0
Lalb_Chr23g0269661 Lupinus albus HOM05D007429 ORTHO05D003505 1.0e-13 80.1 86 57.0
Lalb_Chr08g0243031 Lupinus albus HOM05D007429 ORTHO05D003505 2.9e-13 78.6 51 76.5
Cfa013373 Carpinus fangiana HOM05D007429 ORTHO05D003505 6.5e-13 77.4 51 76.5
CDE02G4418 Ceratophyllum demersum HOM05D007429 ORTHO05D003505 6.5e-13 77.4 95 53.7
CANSAT25G2095 Cannabis sativa HOM05D007429 ORTHO05D003505 1.1e-12 76.6 83 56.6
CDE04G0746 Ceratophyllum demersum HOM05D007429 ORTHO05D003505 4.2e-12 74.7 95 54.7
VMungo1309G0862 Vigna mungo HOM05D007429 ORTHO05D003505 4.2e-12 74.7 82 58.5
GSVIVG01035615001 Vitis vinifera HOM05D007429 ORTHO05D003505 9.4e-12 73.6 84 57.1
Ca_15587_v3 Cicer arietinum L. HOM05D002792 ORTHO05D003039 1.2e-11 73.2 94 48.9
Manes.07G073601 Manihot esculenta HOM05D007429 ORTHO05D003505 2.1e-11 72.4 86 51.2
Carub.0006s1188 Capsella rubella HOM05D007429 ORTHO05D003505 1.0e-10 70.1 50 74.0
Nitab4.5_0001501g0020 Nicotiana tabacum HOM05D006762 ORTHO05D003505 6.7e-10 67.4 94 46.8
Nitab4.5_0000882g0040 Nicotiana tabacum HOM05D006762 ORTHO05D003505 1.1e-09 66.6 105 43.8
A02p31340 Brassica napus HOM05D006762 ORTHO05D003505 3.3e-09 65.1 105 42.9
BraA02t08136Z Brassica rapa HOM05D006762 ORTHO05D003505 3.3e-09 65.1 105 42.9
QL04p035820 Quercus lobata HOM05D006762 ORTHO05D003505 4.3e-09 64.7 100 43.0
SalBow6G0204 Salvia bowleyana HOM05D006762 ORTHO05D003505 5.7e-09 64.3 108 42.6
Migut.A01106 Erythranthe guttata HOM05D006762 ORTHO05D003505 7.4e-09 63.9 107 41.1
SalBow6G1716 Salvia bowleyana HOM05D006762 ORTHO05D003505 9.7e-09 63.5 107 46.7
MBI01_g42895_MAGBIO Magnolia biondii HOM05D007429 ORTHO05D003505 1.7e-08 62.8 53 62.3
Cpa.g.sc29.168 Carica papaya HOM05D006762 ORTHO05D003505 2.2e-08 62.4 107 43.0
Oeu020431.1 Olea europaea HOM05D006762 ORTHO05D003505 2.8e-08 62.0 99 45.5
FAN08G1018 Fragaria x ananassa HOM05D006762 ORTHO05D003505 8.2e-08 60.5 100 47.0
arahy.Tifrunner.gnm1.ann1.QV68FE Arachis hypogaea HOM05D007429 ORTHO05D003505 1.1e-07 60.1 88 44.3
Ciclev10023003m.g Citrus clementina HOM05D006762 ORTHO05D003505 1.1e-07 60.1 105 43.8
Aa31csc22G110 Aethionema arabicum HOM05D006762 ORTHO05D003505 1.4e-07 59.7 111 39.6
C02p48680 Brassica napus HOM05D006762 ORTHO05D003505 1.4e-07 59.7 109 39.4
BolC2t10960H Brassica oleracea HOM05D006762 ORTHO05D003505 1.4e-07 59.7 109 39.4
Sabra16G0215100 Salix brachista HOM05D006762 ORTHO05D003505 1.4e-07 59.7 93 40.9
TAR629G0824 Trochodendron aralioides HOM05D006762 ORTHO05D003505 1.4e-07 59.7 109 42.2
QL12p012005 Quercus lobata HOM05D006762 ORTHO05D003505 1.8e-07 59.3 100 41.0
CAN.G1058.38 Capsicum annuum HOM05D006762 ORTHO05D003505 2.4e-07 58.9 108 42.6
ClCG10G002600 Citrullus lanatus HOM05D006762 ORTHO05D003505 2.4e-07 58.9 102 42.2
Medtr4g100820 Medicago truncatula HOM05D006762 ORTHO05D003505 2.4e-07 58.9 99 44.4
BcaC06g31384 Brassica carinata HOM05D006762 ORTHO05D003505 3.1e-07 58.5 109 38.5
Sed0021009 Sechium edule HOM05D006762 ORTHO05D003505 3.1e-07 58.5 103 43.7
PGSC0003DMG400004817 Solanum tuberosum HOM05D006762 ORTHO05D003505 3.1e-07 58.5 105 40.0
BcaC06g34251 Brassica carinata HOM05D006762 ORTHO05D003505 4.1e-07 58.2 110 38.2
C07p31100 Brassica napus HOM05D006762 ORTHO05D003505 4.1e-07 58.2 110 38.2
FAN04G0434 Fragaria x ananassa HOM05D006762 ORTHO05D003505 4.1e-07 58.2 100 46.0
FAN18G2762 Fragaria x ananassa HOM05D006762 ORTHO05D003505 4.1e-07 58.2 100 46.0
HanXRQChr03g0087771 Helianthus annuus HOM05D006762 ORTHO05D003505 4.1e-07 58.2 93 47.3
AL7G37400 Arabidopsis lyrata HOM05D006762 ORTHO05D003505 5.3e-07 57.8 100 42.0
BcaC06g31382 Brassica carinata HOM05D006762 ORTHO05D003505 5.3e-07 57.8 109 38.5
FAN13G0097 Fragaria x ananassa HOM05D000502 ORTHO05D000356 6.9e-07 57.4 104 43.3
Gohir.A08G169800 Gossypium hirsutum HOM05D006762 ORTHO05D003505 6.9e-07 57.4 106 44.3
Gohir.D08G188100 Gossypium hirsutum HOM05D006762 ORTHO05D003505 6.9e-07 57.4 106 44.3
Gorai.004G198000 Gossypium raimondii HOM05D006762 ORTHO05D003505 6.9e-07 57.4 106 44.3
Aqoxy7G00783 Aquilegia oxysepala HOM05D006762 ORTHO05D003505 9.1e-07 57.0 111 38.7
MELO3C013933.2 Cucumis melo HOM05D006762 ORTHO05D003505 9.1e-07 57.0 102 42.2
Sp2g12170 Schrenkiella parvula HOM05D006762 ORTHO05D003505 9.1e-07 57.0 109 38.5
Manes.01G081200 Manihot esculenta HOM05D006762 ORTHO05D003505 1.2e-06 56.6 97 42.3
Potri.017G068600 Populus trichocarpa HOM05D006762 ORTHO05D003505 1.2e-06 56.6 107 40.2
GSVIVG01006992001 Vitis vinifera HOM05D006762 ORTHO05D003505 1.2e-06 56.6 81 44.4
CANSAT21G1567 Cannabis sativa HOM05D006762 ORTHO05D003505 1.5e-06 56.2 95 45.3
AUR62007089 Chenopodium quinoa HOM05D006762 ORTHO05D003505 1.5e-06 56.2 47 61.7
AUR62019952 Chenopodium quinoa HOM05D006762 ORTHO05D003505 1.5e-06 56.2 47 61.7
COL.COLO4_37166 Corchorus olitorius HOM05D006762 ORTHO05D003505 2.6e-06 55.5 108 41.7
arahy.Tifrunner.gnm1.ann1.YI4YN9 Arachis hypogaea HOM05D006762 ORTHO05D003505 3.4e-06 55.1 53 54.7
Lsat_1_v5_gn_6_90840 Lactuca sativa HOM05D006762 ORTHO05D003505 3.4e-06 55.1 100 44.0
QL06p040030 Quercus lobata HOM05D003477 ORTHO05D004043 3.4e-06 55.1 92 42.4
GSVIVG01004713001 Vitis vinifera HOM05D006762 ORTHO05D003505 3.4e-06 55.1 81 44.4
CiPaw.11G079800 Carya illinoinensis HOM05D006762 ORTHO05D003505 5.9e-06 54.3 100 39.0
unitig_21.g20319 Utricularia gibba HOM05D006762 ORTHO05D003505 5.9e-06 54.3 92 43.5
Lalb_Chr09g0330061 Lupinus albus HOM05D006762 ORTHO05D003505 7.7e-06 53.9 96 38.5
Solyc08g078560.3 Solanum lycopersicum HOM05D006762 ORTHO05D003505 7.7e-06 53.9 108 40.7


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