Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p04580 Brassica napus HOM05D008799 ORTHO05D010975 7.9e-133 477.6 345 100.0
BcaC03g13324 Brassica carinata HOM05D008799 ORTHO05D010975 5.5e-126 454.9 350 88.9
A02p00590 Brassica napus HOM05D008799 ORTHO05D010975 1.0e-108 397.5 362 74.0
BolC2t06418H Brassica oleracea HOM05D008799 ORTHO05D010975 2.2e-98 363.2 356 75.8
BraA02t05042Z Brassica rapa HOM05D008799 ORTHO05D010975 5.3e-97 358.6 362 71.3
BcaB05g21498 Brassica carinata HOM05D008799 ORTHO05D010975 4.5e-96 355.5 372 66.7
Sp6g32790 Schrenkiella parvula HOM05D008799 ORTHO05D010975 1.9e-86 323.6 409 64.8
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 3.0e-76 289.7 403 60.5
Carub.0006s0914 Capsella rubella HOM05D008799 ORTHO05D010975 2.2e-74 283.5 399 63.9
BcaB01g06270 Brassica carinata HOM05D008799 ORTHO05D010975 8.3e-74 281.6 428 56.5
BraA03t09809Z Brassica rapa HOM05D008799 ORTHO05D010975 7.3e-70 268.5 422 54.0
AL6G21190 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 8.9e-68 261.5 417 58.0
A03p04690 Brassica napus HOM05D008799 ORTHO05D010975 7.0e-65 251.9 421 57.2
A10p26930 Brassica napus HOM05D008799 ORTHO05D010975 3.9e-63 246.1 365 57.3
BraA10t44744Z Brassica rapa HOM05D008799 ORTHO05D010975 1.2e-61 241.1 365 54.2
C03p05400 Brassica napus HOM05D008799 ORTHO05D010975 4.7e-61 239.2 422 53.6
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 4.7e-61 239.2 421 53.4
BcaB01g05508 Brassica carinata HOM05D008799 ORTHO05D010975 3.7e-58 229.6 417 55.6
AT5G10660 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 1.6e-56 224.2 389 54.2
C09p66120 Brassica napus HOM05D008799 ORTHO05D010975 5.6e-54 215.7 369 51.5
BolC9t59432H Brassica oleracea HOM05D008799 ORTHO05D010975 5.6e-54 215.7 369 51.5
BcaC04g19292 Brassica carinata HOM05D008799 ORTHO05D010975 1.8e-52 210.7 241 59.3
CARHR188570 Cardamine hirsuta HOM05D008799 ORTHO05D010975 1.1e-49 201.4 436 45.2
Aa31LG3G16460 Aethionema arabicum HOM05D008799 ORTHO05D010975 1.3e-47 194.5 447 45.9
BcaB08g37100 Brassica carinata HOM05D008799 ORTHO05D010975 2.5e-46 190.3 238 57.6
AL6G36554 Arabidopsis lyrata HOM05D008799 ORTHO05D010975 4.3e-46 189.5 444 51.4
AT5G24880 Arabidopsis thaliana HOM05D008799 ORTHO05D010975 4.0e-44 183.0 454 48.5
Sp2g22570 Schrenkiella parvula HOM05D008799 ORTHO05D010975 9.0e-44 181.8 425 43.3
A06p35660 Brassica napus HOM05D008799 ORTHO05D010975 1.3e-39 167.9 428 40.2
BraA06t26491Z Brassica rapa HOM05D008799 ORTHO05D010975 1.9e-38 164.1 431 42.7
Carub.0006s2273 Capsella rubella HOM05D008799 ORTHO05D010975 6.2e-37 159.1 428 45.1
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 9.0e-36 155.2 387 49.6
BcaNung05897 Brassica carinata HOM05D008799 ORTHO05D010975 3.4e-35 153.3 441 41.0
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 4.9e-34 149.4 405 37.8
C07p42890 Brassica napus HOM05D008799 ORTHO05D010975 1.2e-32 144.8 428 43.0
BolC7t44817H Brassica oleracea HOM05D008799 ORTHO05D010975 1.2e-32 144.8 428 43.0
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 2.1e-32 144.1 405 47.4
Aa31LG11G4080 Aethionema arabicum HOM05D008799 ORTHO05D010975 1.7e-18 97.8 264 40.9
BolC2t12057H Brassica oleracea HOM05D008799 ORTHO05D010975 2.2e-10 70.9 253 36.0
Cpa.g.sc23.16 Carica papaya HOM05D013263 ORTHO05D009846 7.2e-09 65.9 363 31.4
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 8.8e-07 58.9 115 39.1
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 1.9e-06 57.8 456 34.9
COL.COLO4_19033 Corchorus olitorius HOM05D019025 ORTHO05D009846 2.5e-06 57.4 49 69.4
Medtr3g108830 Medicago truncatula HOM05D013197 ORTHO05D009846 3.3e-06 57.0 47 72.3
BraA09t36282Z Brassica rapa HOM05D023039 ORTHO05D024601 5.7e-06 56.2 37 78.4


User provided reference genes

Program Settings