Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 3.2e-62 241.5 116 100.0
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 6.7e-60 233.8 116 97.4
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 3.3e-51 204.9 159 67.3
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 7.9e-37 157.1 77 100.0
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 7.9e-37 157.1 77 100.0
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 7.9e-37 157.1 77 100.0
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 7.9e-37 157.1 77 100.0
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 7.9e-37 157.1 77 100.0
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 1.4e-36 156.4 77 98.7
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 1.8e-36 156.0 77 98.7
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 1.8e-36 156.0 77 98.7
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 2.3e-36 155.6 77 98.7
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 97.4
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 97.4
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.0e-36 155.2 77 98.7
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 3.9e-36 154.8 77 97.4
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 3.9e-36 154.8 77 97.4
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 3.9e-36 154.8 77 97.4
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 3.9e-36 154.8 77 97.4
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 5.1e-36 154.5 76 97.4
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 6.7e-36 154.1 77 96.1
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 6.7e-36 154.1 76 97.4
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 6.7e-36 154.1 76 97.4
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 6.7e-36 154.1 77 97.4
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 6.7e-36 154.1 77 96.1
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.7e-36 154.1 76 96.1
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 8.8e-36 153.7 77 96.1
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 1.1e-35 153.3 76 97.4
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 1.1e-35 153.3 76 97.4
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.1e-35 153.3 76 97.4
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.1e-35 153.3 105 73.3
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 94.8
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 96.1
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 94.8
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 96.1
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 96.1
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 96.1
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.0e-35 152.5 76 97.4
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 96.1
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.0e-35 152.5 76 97.4
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 2.0e-35 152.5 77 96.1
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 2.0e-35 152.5 76 97.4
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 2.0e-35 152.5 76 97.4
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 2.0e-35 152.5 76 97.4
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 2.6e-35 152.1 77 94.8
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 2.6e-35 152.1 77 96.1
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.3e-35 151.8 77 93.5
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 3.3e-35 151.8 77 94.8
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.3e-35 151.8 76 94.7
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 3.3e-35 151.8 76 96.1
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 3.3e-35 151.8 76 96.1
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 3.3e-35 151.8 77 94.8
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.3e-35 151.8 76 94.7
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 4.4e-35 151.4 77 94.8
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 4.4e-35 151.4 77 93.5
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 4.4e-35 151.4 77 93.5
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 4.4e-35 151.4 76 96.1
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 5.7e-35 151.0 77 93.5
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 5.7e-35 151.0 76 94.7
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 5.7e-35 151.0 77 93.5
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 7.4e-35 150.6 76 92.1
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 7.4e-35 150.6 76 94.7
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 9.7e-35 150.2 77 93.5
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 9.7e-35 150.2 77 93.5
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 9.7e-35 150.2 77 94.8
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.3e-34 149.8 76 92.1
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.3e-34 149.8 76 90.8
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 1.3e-34 149.8 77 93.5
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 1.3e-34 149.8 76 94.7
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 1.3e-34 149.8 76 94.7
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 1.3e-34 149.8 77 93.5
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 1.7e-34 149.4 76 94.7
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.7e-34 149.4 77 93.5
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 2.8e-34 148.7 76 90.8
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 2.8e-34 148.7 77 93.5
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 3.7e-34 148.3 77 92.2
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 4.8e-34 147.9 77 92.2
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 4.8e-34 147.9 76 89.5
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 4.8e-34 147.9 76 89.5
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.8e-34 147.9 76 94.7
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 6.3e-34 147.5 77 92.2
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 6.3e-34 147.5 77 92.2
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 6.3e-34 147.5 77 92.2
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 6.3e-34 147.5 77 92.2
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 6.3e-34 147.5 77 93.5
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 8.2e-34 147.1 76 93.4
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 8.2e-34 147.1 75 93.3
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.1e-33 146.7 71 98.6
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 1.8e-33 146.0 76 92.1
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.8e-33 146.0 70 98.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.8e-33 146.0 76 92.1
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 2.4e-33 145.6 77 92.2
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 4.1e-33 144.8 74 91.9
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 7.0e-33 144.1 77 89.6
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 9.1e-33 143.7 74 90.5
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 9.1e-33 143.7 74 90.5
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 9.1e-33 143.7 74 90.5
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 9.1e-33 143.7 74 90.5
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 9.1e-33 143.7 70 97.1
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.0e-32 142.5 74 90.5
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.7e-31 139.4 285 35.4
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.7e-31 139.4 73 87.7
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-31 139.0 284 35.2
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 2.9e-31 138.7 69 92.8
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 5.0e-31 137.9 76 88.2
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 6.5e-31 137.5 69 100.0
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.9e-30 136.0 284 34.9
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.5e-30 135.6 71 87.3
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 9.4e-30 133.7 76 84.2
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.4e-30 133.7 71 91.5
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.2e-29 133.3 74 85.1
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.2e-29 133.3 79 84.8
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.6e-29 132.9 70 90.0
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 3.6e-29 131.7 70 88.6
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.9e-28 128.3 68 89.7
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.7e-26 122.9 66 89.4
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.7e-26 121.7 66 87.9
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 4.8e-26 121.3 74 78.4
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 7.0e-25 117.5 69 78.3
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.2e-24 116.7 65 76.9
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 3.5e-24 115.2 77 72.7
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 5.0e-23 111.3 66 77.3
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 5.5e-22 107.8 50 96.0
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.8e-20 102.8 77 68.8
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.3e-18 96.7 64 68.8
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 4.8e-18 94.7 50 88.0
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.8e-17 92.8 127 47.2
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 2.4e-17 92.4 57 78.9
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 4.1e-17 91.7 127 45.7
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 9.1e-17 90.5 128 46.9
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.6e-16 89.7 46 84.8
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.6e-16 89.7 127 44.9
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.5e-16 88.6 43 88.4
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 5.9e-16 87.8 46 82.6
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 7.7e-16 87.4 127 44.1
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.0e-15 87.0 46 80.4
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 2.2e-15 85.9 97 48.5
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.3e-10 67.8 38 84.2
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.7e-07 59.7 29 82.8
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.3e-07 59.3 40 62.5
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.9e-07 58.9 31 87.1
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.9e-07 58.9 31 87.1


User provided reference genes

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