Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p03500 Brassica napus HOM05D035636 ORTHO05D040671 3.4e-142 508.4 278 100.0
BcaC03g13219 Brassica carinata HOM05D007202 ORTHO05D009125 5.9e-22 109.0 146 47.9
BraA02t04949Z Brassica rapa HOM05D035636 ORTHO05D040671 8.6e-21 105.1 52 94.2
BolC9t59607H Brassica oleracea HOM05D007202 ORTHO05D009125 8.3e-16 88.6 100 49.0
AT5G08310 Arabidopsis thaliana HOM05D007202 ORTHO05D009125 2.4e-15 87.0 99 47.5
C09p68630 Brassica napus HOM05D007202 ORTHO05D009125 7.0e-15 85.5 100 47.0
Aa31LG3G18260 Aethionema arabicum HOM05D007202 ORTHO05D009766 1.6e-14 84.3 105 46.7
CARHR204810 Cardamine hirsuta HOM05D007202 ORTHO05D009125 4.6e-14 82.8 113 42.5
A10p28370 Brassica napus HOM05D007202 ORTHO05D009125 1.7e-13 80.9 109 44.0
Sp6g34640 Schrenkiella parvula HOM05D007202 ORTHO05D009125 1.7e-13 80.9 97 45.4
BraA10t44884Z Brassica rapa HOM05D007202 ORTHO05D009125 5.0e-13 79.3 109 44.0
AL6G18720 Arabidopsis lyrata HOM05D007202 ORTHO05D009125 1.5e-12 77.8 99 44.4
Thhalv10015588m.g Eutrema salsugineum HOM05D007202 ORTHO05D009125 1.9e-12 77.4 132 41.7
Carub.0006s0720 Capsella rubella HOM05D007202 ORTHO05D009125 8.0e-11 72.0 97 43.3
BcaC03g13217 Brassica carinata HOM05D035636 ORTHO05D092413 1.8e-10 70.9 62 51.6
TAR622G0387 Trochodendron aralioides HOM05D007202 ORTHO05D009125 6.8e-10 68.9 188 28.7
Hund13321 Selenicereus undatus HOM05D005973 ORTHO05D007285 9.8e-09 65.1 231 28.1
EL10Ac2g02881 Beta vulgaris HOM05D005973 ORTHO05D007285 1.1e-07 61.6 234 28.6
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 1.1e-07 61.6 76 36.8
CSS0040738 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 1.1e-07 61.6 76 36.8
MBI13_g05940_MAGBIO Magnolia biondii HOM05D000424 ORTHO05D000355 1.4e-07 61.2 200 26.0
vmacro17156 Vaccinium macrocarpon HOM05D000424 ORTHO05D000355 1.9e-07 60.8 144 29.9
Haze_20537 Corylus avellana HOM05D002890 ORTHO05D009847 3.2e-07 60.1 212 24.1
Dinv32060 Davidia involucrata HOM05D005973 ORTHO05D007285 4.1e-07 59.7 229 27.5
Actinidia29766 Actinidia chinensis HOM05D000424 ORTHO05D000355 5.4e-07 59.3 83 42.2
C02p07450 Brassica napus HOM05D000424 ORTHO05D000355 5.4e-07 59.3 188 22.9
BolC2t06676H Brassica oleracea HOM05D000424 ORTHO05D000355 5.4e-07 59.3 188 22.9
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 5.4e-07 59.3 191 24.1
BcaC03g13436 Brassica carinata HOM05D000424 ORTHO05D000355 9.2e-07 58.5 188 22.9
AUR62037245 Chenopodium quinoa HOM05D005973 ORTHO05D007285 9.2e-07 58.5 250 27.2
CSS0048316 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 1.6e-06 57.8 106 36.8
Thhalv10003177m.g Eutrema salsugineum HOM05D006218 ORTHO05D007338 2.1e-06 57.4 209 23.9
TAR376G0085 Trochodendron aralioides HOM05D000424 ORTHO05D000355 2.1e-06 57.4 112 33.0
Aqoxy6G01988 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 2.7e-06 57.0 102 34.3
Ah.10g030910 Amaranthus hybridus HOM05D005973 ORTHO05D007285 3.5e-06 56.6 185 27.6
Haze_15114 Corylus avellana HOM05D000891 ORTHO05D000761 3.5e-06 56.6 171 21.1
Lju41C9T14 Lonicera japonica HOM05D006569 ORTHO05D007515 3.5e-06 56.6 188 22.9
AL5G43620 Arabidopsis lyrata HOM05D003039 ORTHO05D008410 4.6e-06 56.2 143 25.9
A06p08270 Brassica napus HOM05D002890 ORTHO05D009847 4.6e-06 56.2 118 26.3
CSS0032654 Camellia sinensis var. sinensis HOM05D007202 ORTHO05D009125 4.6e-06 56.2 106 34.9
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 4.6e-06 56.2 107 35.5
Lsat_1_v5_gn_2_6800 Lactuca sativa HOM05D000424 ORTHO05D000355 4.6e-06 56.2 108 32.4
BcaC05g25040 Brassica carinata HOM05D002890 ORTHO05D009847 6.0e-06 55.8 121 25.6
C05p09820 Brassica napus HOM05D002890 ORTHO05D009847 6.0e-06 55.8 121 25.6
QL09p040247 Quercus lobata HOM05D005973 ORTHO05D007285 6.0e-06 55.8 241 23.2
arahy.Tifrunner.gnm1.ann1.S1ZEXT Arachis hypogaea HOM05D004182 ORTHO05D007321 7.8e-06 55.5 137 24.8
BraA02t05256Z Brassica rapa HOM05D000424 ORTHO05D000355 7.8e-06 55.5 191 28.8
BraA06t24026Z Brassica rapa HOM05D002890 ORTHO05D009847 7.8e-06 55.5 118 26.3
Cfa000220 Carpinus fangiana HOM05D002890 ORTHO05D005855 7.8e-06 55.5 116 27.6
CDE06G0674 Ceratophyllum demersum HOM05D000424 ORTHO05D000355 7.8e-06 55.5 102 32.4
Haze_20536 Corylus avellana HOM05D002890 ORTHO05D009847 7.8e-06 55.5 116 27.6
TWI63G0498 Tripterygium wilfordii HOM05D002890 ORTHO05D009847 7.8e-06 55.5 92 30.4


User provided reference genes

Program Settings