Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p40920 Brassica napus HOM05D003538 ORTHO05D018603 1.1e-37 159.5 77 100.0
A08p26910 Brassica napus HOM05D003538 ORTHO05D018603 1.1e-37 159.5 77 100.0
C02p02900 Brassica napus HOM05D003538 ORTHO05D018603 1.1e-37 159.5 77 100.0
C04p65130 Brassica napus HOM05D003538 ORTHO05D018603 1.1e-37 159.5 77 100.0
BolC9t59332H Brassica oleracea HOM05D003538 ORTHO05D004376 6.7e-24 113.6 63 84.1
A10p25960 Brassica napus HOM05D003538 ORTHO05D004376 1.5e-23 112.5 63 82.5
BraA10t44658Z Brassica rapa HOM05D003538 ORTHO05D004376 1.5e-23 112.5 63 82.5
C09p65040 Brassica napus HOM05D003538 ORTHO05D004376 1.9e-23 112.1 63 82.5
BcaC04g19195 Brassica carinata HOM05D003538 ORTHO05D004376 2.5e-23 111.7 63 82.5
A05p29870 Brassica napus HOM05D003538 ORTHO05D018603 5.7e-23 110.5 71 76.1
Thhalv10013348m.g Eutrema salsugineum HOM05D003538 ORTHO05D004376 4.1e-21 104.4 63 71.4
AL6G22530 Arabidopsis lyrata HOM05D003538 ORTHO05D004376 1.7e-19 99.0 61 75.4
Carub.0006s1031 Capsella rubella HOM05D003538 ORTHO05D004376 2.2e-19 98.6 63 73.0
CARHR201410 Cardamine hirsuta HOM05D003538 ORTHO05D004376 2.9e-19 98.2 63 73.0
Aa31LG3G15420 Aethionema arabicum HOM05D003538 ORTHO05D004376 6.5e-19 97.1 65 67.7
AT5G11780 Arabidopsis thaliana HOM05D003538 ORTHO05D004376 3.2e-18 94.7 63 69.8
BcaB06g29645 Brassica carinata HOM05D003538 ORTHO05D018603 4.2e-18 94.4 58 81.0
A09p68660 Brassica napus HOM05D003538 ORTHO05D018603 1.5e-15 85.9 39 100.0
C08p16650 Brassica napus HOM05D003538 ORTHO05D018603 1.5e-15 85.9 39 100.0
Ca_13176_v3 Cicer arietinum L. HOM05D003538 ORTHO05D004376 9.7e-07 56.6 60 41.7
Lj5g0027111 Lotus japonicus HOM05D003538 ORTHO05D004376 2.2e-06 55.5 58 44.8
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea HOM05D003538 ORTHO05D004376 2.8e-06 55.1 60 40.0
TAR626G0286 Trochodendron aralioides HOM05D003538 ORTHO05D004376 2.8e-06 55.1 68 41.2
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea HOM05D003538 ORTHO05D004376 3.7e-06 54.7 60 40.0
Dinv36743 Davidia involucrata HOM05D003538 ORTHO05D004376 4.8e-06 54.3 64 37.5
GSVIVG01035358001 Vitis vinifera HOM05D003538 ORTHO05D004376 4.8e-06 54.3 68 35.3
Phvul.001G034000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 8.2e-06 53.5 60 40.0
VMungo0647G0716 Vigna mungo HOM05D003538 ORTHO05D004376 8.2e-06 53.5 60 40.0


User provided reference genes

Program Settings