Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 1.1e-119 433.3 225 100.0
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 1.5e-103 379.8 199 97.5
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 1.2e-100 370.2 204 93.1
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 2.0e-100 369.4 204 93.1
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 2.9e-91 339.0 201 88.1
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 1.1e-87 327.0 200 86.5
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 4.4e-84 315.1 200 83.0
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 9.8e-84 313.9 200 82.5
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 2.2e-83 312.8 202 81.7
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 1.0e-80 303.9 200 80.5
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 3.9e-80 302.0 200 81.5
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 2.5e-79 299.3 199 79.9
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 1.5e-71 273.5 183 80.3
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 8.9e-69 264.2 198 72.2
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 7.8e-65 251.1 200 67.5
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.5e-55 220.3 179 66.5
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.8e-54 216.1 200 58.5
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 3.6e-54 215.7 199 56.8
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 3.6e-54 215.7 175 64.6
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 6.2e-54 214.9 199 57.8
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 1.1e-53 214.2 162 67.3
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 1.4e-53 213.8 200 58.5
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 3.1e-53 212.6 200 57.5
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 4.0e-53 212.2 199 54.3
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 6.9e-53 211.5 199 57.3
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.2e-52 210.7 175 63.4
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.2e-52 210.7 177 61.6
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.2e-52 210.7 177 63.3
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 1.5e-52 210.3 199 54.3
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 1.5e-52 210.3 199 57.3
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 2.0e-52 209.9 197 57.4
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 2.6e-52 209.5 200 57.0
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 3.4e-52 209.1 198 56.6
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 3.4e-52 209.1 199 57.8
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 4.5e-52 208.8 189 58.2
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 5.8e-52 208.4 204 54.9
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 7.6e-52 208.0 177 61.6
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 9.9e-52 207.6 177 61.0
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 9.9e-52 207.6 200 57.5
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.7e-51 206.8 199 56.3
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 2.9e-51 206.1 177 59.3
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 4.9e-51 205.3 200 55.5
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 6.4e-51 204.9 177 61.6
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 6.4e-51 204.9 177 61.6
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.1e-50 204.1 199 54.8
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.4e-50 203.8 178 60.1
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.4e-50 203.8 199 55.8
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 2.4e-50 203.0 161 64.0
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 2.4e-50 203.0 197 56.9
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 4.2e-50 202.2 199 56.8
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 4.2e-50 202.2 161 67.7
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 5.5e-50 201.8 181 56.9
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 5.5e-50 201.8 201 56.2
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.6e-49 200.3 198 54.0
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 3.5e-49 199.1 200 55.0
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 4.6e-49 198.7 177 58.2
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 6.0e-49 198.4 199 53.8
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 7.9e-49 198.0 173 59.5
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.0e-48 197.6 199 54.3
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 1.3e-48 197.2 131 74.8
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 1.3e-48 197.2 199 54.8
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.3e-48 197.2 167 62.9
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 1.3e-48 197.2 163 63.8
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 1.8e-48 196.8 194 56.7
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.3e-48 196.4 200 54.0
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 2.3e-48 196.4 149 66.4
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 3.0e-48 196.1 170 62.4
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.0e-48 196.1 177 59.3
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 3.9e-48 195.7 169 59.2
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 3.9e-48 195.7 167 62.3
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 3.9e-48 195.7 199 53.8
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 5.1e-48 195.3 139 70.5
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 5.1e-48 195.3 167 62.9
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 5.1e-48 195.3 196 56.1
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 5.1e-48 195.3 194 56.2
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 8.7e-48 194.5 138 71.0
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 8.7e-48 194.5 199 52.8
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 8.7e-48 194.5 167 61.7
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 8.7e-48 194.5 159 65.4
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 1.1e-47 194.1 134 71.6
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.1e-47 194.1 159 63.5
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.9e-47 193.4 179 57.5
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 1.9e-47 193.4 192 53.6
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 2.5e-47 193.0 157 62.4
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 3.3e-47 192.6 137 71.5
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 5.6e-47 191.8 198 57.1
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 5.6e-47 191.8 159 64.2
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 7.4e-47 191.4 159 64.2
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 9.6e-47 191.0 140 70.0
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 9.6e-47 191.0 135 69.6
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 1.3e-46 190.7 167 60.5
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 2.1e-46 189.9 172 59.3
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.8e-46 189.5 131 74.0
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 2.8e-46 189.5 131 74.0
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 3.7e-46 189.1 139 69.8
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 6.2e-46 188.3 153 63.4
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 8.1e-46 188.0 162 61.1
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 8.1e-46 188.0 153 62.7
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 1.4e-45 187.2 152 66.4
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 2.4e-45 186.4 181 56.9
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 3.1e-45 186.0 131 70.2
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 5.3e-45 185.3 176 56.2
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 6.9e-45 184.9 131 70.2
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 9.0e-45 184.5 153 61.4
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 1.2e-44 184.1 200 52.5
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 5.8e-44 181.8 150 62.7
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 3.8e-43 179.1 131 69.5
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.1e-42 177.6 131 69.5
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 2.5e-42 176.4 135 65.2
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 1.6e-41 173.7 159 59.7
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 3.9e-40 169.1 153 55.6
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.5e-39 166.4 167 56.3
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 2.5e-39 166.4 176 50.6
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 4.3e-39 165.6 133 61.7
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 5.7e-39 165.2 167 55.7
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 1.6e-38 163.7 133 62.4
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 4.1e-37 159.1 109 71.6
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 6.9e-37 158.3 135 57.8
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 2.0e-36 156.8 120 65.0
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 6.1e-33 145.2 132 54.5
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.1e-31 141.0 137 51.8
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 8.2e-30 134.8 142 50.7
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 3.1e-29 132.9 142 52.8
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.2e-28 131.0 136 49.3
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 1.5e-28 130.6 182 41.2
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 8.5e-27 124.8 174 41.4
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 9.4e-26 121.3 85 69.4
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.2e-25 120.9 131 51.9
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 7.9e-25 118.2 130 44.6
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 1.7e-22 110.5 143 42.0
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 5.3e-21 105.5 85 62.4
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.3e-19 100.9 144 39.6
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 1.7e-19 100.5 88 61.4
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 5.0e-19 99.0 106 55.7
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 2.2e-14 83.6 57 71.9
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.0e-11 74.7 69 56.5
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 3.8e-11 72.8 54 63.0
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 2.0e-07 60.5 69 53.6


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