Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 1.4e-256 889.0 425 100.0
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.8e-232 808.9 413 93.0
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 2.4e-232 808.5 410 95.1
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-230 803.1 404 94.6
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 1.9e-229 798.9 436 88.3
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 3.6e-228 794.7 393 96.2
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 1.7e-222 775.8 393 94.1
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-161 573.2 393 74.8
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-159 566.6 380 73.7
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 9.8e-109 397.9 303 67.7
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 3.0e-89 333.2 389 50.1
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.6e-85 320.1 387 47.8
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 2.7e-74 283.5 398 46.0
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-73 281.6 385 45.5
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-73 281.6 385 45.5
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.0e-73 281.6 385 45.5
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 8.7e-73 278.5 410 44.1
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-72 278.1 380 43.7
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-71 274.6 375 43.5
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-69 267.3 385 46.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-68 264.6 385 45.5
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-68 263.5 398 43.2
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-67 261.5 398 43.0
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 7.1e-67 258.8 387 42.9
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 7.1e-67 258.8 369 44.4
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 9.3e-67 258.5 387 43.4
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-66 256.5 400 43.5
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 4.6e-66 256.1 383 43.6
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 7.3e-64 248.8 368 43.5
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 3.1e-62 243.4 386 42.2
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 5.3e-62 242.7 385 42.3
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 6.9e-62 242.3 417 40.0
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.6e-61 240.4 378 38.6
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.6e-61 240.4 378 38.6
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 4.5e-61 239.6 308 48.1
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-56 224.6 412 40.3
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 6.2e-55 219.2 408 40.9
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 8.1e-55 218.8 288 46.2
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-53 214.9 397 37.8
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-53 214.5 318 46.2
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 1.5e-53 214.5 405 36.5
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 1.4e-51 208.0 378 36.5
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 2.5e-51 207.2 352 40.6
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 3.2e-51 206.8 416 36.5
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-49 201.8 401 35.7
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-48 197.6 396 34.8
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 2.5e-48 197.2 385 38.7
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 4.9e-44 183.0 361 36.6
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-36 157.9 229 45.9
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 1.4e-35 154.8 380 32.6
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 2.5e-35 154.1 188 44.1
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 1.4e-33 148.3 285 36.8
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 7.4e-32 142.5 166 45.2
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 6.3e-31 139.4 166 44.6
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 4.1e-30 136.7 382 30.4
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-30 136.7 148 48.0
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 7.7e-29 132.5 159 45.3
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 4.2e-27 126.7 135 49.6
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 2.7e-26 124.0 373 28.7
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 6.1e-26 122.9 379 31.1
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 1.4e-25 121.7 393 30.8
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.8e-25 121.3 169 38.5
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 3.3e-24 117.1 173 38.7
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 4.4e-24 116.7 276 38.0
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.7e-23 114.8 168 38.7
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.7e-23 114.8 358 29.9
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 5.3e-22 109.8 271 36.9
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 1.5e-21 108.2 174 40.2
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 1.3e-20 105.1 184 38.6
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 5.0e-20 103.2 158 40.5
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-19 101.7 126 47.6
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 1.6e-18 98.2 192 35.4
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 4.7e-18 96.7 209 35.4
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 6.1e-18 96.3 370 28.1
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.0e-17 95.5 179 40.2
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 3.9e-17 93.6 166 36.1
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 2.0e-16 91.3 166 36.1
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 4.8e-15 86.7 179 36.9
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 8.2e-15 85.9 360 25.3
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 2.4e-14 84.3 138 42.0
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 9.1e-14 82.4 166 37.3
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 9.1e-14 82.4 80 50.0
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 9.1e-14 82.4 351 24.8
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-13 81.3 125 39.2
Thhalv10014870m.g Eutrema salsugineum HOM05D007309 ORTHO05D014840 2.0e-13 81.3 168 34.5
A04p05130 Brassica napus HOM05D010965 ORTHO05D016023 1.3e-12 78.6 271 25.5
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 1.7e-12 78.2 164 36.0
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 3.8e-12 77.0 166 31.9
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 6.5e-12 76.3 352 23.6
BolC4t25347H Brassica oleracea HOM05D010965 ORTHO05D016023 8.5e-12 75.9 371 23.7
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 1.9e-11 74.7 386 25.9
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 1.9e-11 74.7 386 25.9
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 1.9e-11 74.7 164 35.4
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.5e-11 74.3 162 33.3
C04p37700 Brassica napus HOM05D010965 ORTHO05D016023 2.5e-11 74.3 326 25.2
BcaC02g09040 Brassica carinata HOM05D010965 ORTHO05D016023 4.2e-11 73.6 355 22.8
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.6e-10 71.6 97 42.3
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 1.6e-10 71.6 346 24.0
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 6.1e-10 69.7 351 23.4
C07p13270 Brassica napus HOM05D023794 ORTHO05D028264 1.4e-09 68.6 185 29.2
A01p09740 Brassica napus HOM05D007309 ORTHO05D027345 1.2e-08 65.5 118 43.2
BraA01t00917Z Brassica rapa HOM05D007309 ORTHO05D027345 2.0e-08 64.7 122 41.8
Carub.0001s3469 Capsella rubella HOM05D001456 ORTHO05D010099 4.4e-08 63.5 156 28.8
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 2.8e-07 60.8 128 35.9
BcaB02g08391 Brassica carinata HOM05D000018 ORTHO05D016023 4.8e-07 60.1 242 24.8
BcaC09g51620 Brassica carinata HOM05D007309 ORTHO05D027345 1.8e-06 58.2 86 45.3
A01p35550 Brassica napus HOM05D012545 ORTHO05D013730 5.3e-06 56.6 142 32.4
BraA01t03637Z Brassica rapa HOM05D012545 ORTHO05D013730 5.3e-06 56.6 142 31.0
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 7.0e-06 56.2 94 41.5


User provided reference genes

Program Settings