Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-224 781.6 382 100.0
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 9.1e-207 723.4 385 93.5
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-192 676.4 399 85.2
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-191 671.4 399 86.0
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 9.5e-188 660.2 414 82.9
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-184 649.8 399 83.2
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-179 632.9 399 82.0
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 5.1e-173 611.3 386 81.9
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 6.9e-154 547.7 402 71.1
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 3.8e-152 542.0 388 74.0
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-149 533.5 392 70.9
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 1.7e-144 516.5 361 76.2
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-141 507.3 390 68.2
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 2.4e-130 469.5 404 62.4
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 4.1e-130 468.8 409 61.6
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 5.0e-128 461.8 388 61.9
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-125 454.1 425 58.1
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 9.7e-124 447.6 396 61.4
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 8.2e-123 444.5 427 58.5
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 6.1e-110 401.7 293 71.0
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 2.2e-104 383.3 399 55.6
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 8.5e-104 381.3 410 54.6
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 5.2e-101 372.1 406 53.9
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 3.6e-94 349.4 300 61.3
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-89 333.6 378 51.3
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 2.5e-87 326.6 212 75.9
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 9.5e-87 324.7 370 51.6
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 8.0e-86 321.6 373 51.2
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 5.4e-66 255.8 198 69.2
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.7e-56 224.2 407 40.5
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 5.1e-56 222.6 406 40.6
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 6.6e-56 222.2 407 40.3
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 1.1e-55 221.5 407 39.6
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 1.5e-55 221.1 408 40.9
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 7.3e-55 218.8 409 39.4
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 2.1e-54 217.2 398 40.2
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 8.1e-54 215.3 432 38.2
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 8.9e-53 211.8 395 39.7
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 8.9e-53 211.8 435 37.0
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-52 210.3 427 36.5
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 9.9e-52 208.4 430 36.5
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 1.7e-51 207.6 443 35.9
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.4e-50 203.8 386 39.9
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.4e-50 203.8 386 39.9
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 2.4e-50 203.8 329 41.9
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 4.6e-49 199.5 395 37.5
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 9.6e-47 191.8 210 55.7
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 6.9e-45 185.7 378 37.0
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 6.4e-43 179.1 127 70.1
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 7.1e-42 175.6 356 37.4
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 2.1e-41 174.1 382 36.4
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-39 167.5 229 45.9
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 9.9e-36 155.2 282 38.7
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-35 153.7 381 36.0
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 4.6e-33 146.4 380 33.7
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 6.2e-30 136.0 114 60.5
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 1.2e-28 131.7 333 33.9
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 1.2e-28 131.7 288 34.4
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 2.0e-28 131.0 123 57.7
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 2.2e-27 127.5 148 51.4
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-25 120.9 83 69.9
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 6.0e-25 119.4 88 71.6
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 8.7e-24 115.5 227 37.4
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 3.3e-23 113.6 101 61.4
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 5.7e-23 112.8 395 29.4
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 2.8e-22 110.5 363 29.2
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 3.7e-22 110.2 339 31.9
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 3.1e-21 107.1 67 76.1
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 6.9e-21 105.9 109 54.1
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-20 105.1 60 80.0
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.6e-20 104.0 337 31.5
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-20 103.6 182 35.7
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 8.4e-19 99.0 120 51.7
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 3.2e-18 97.1 203 36.5
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.2e-17 95.1 371 26.1
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-17 95.1 70 72.9
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 6.1e-17 92.8 171 36.3
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 7.9e-17 92.4 389 25.4
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-16 92.0 89 58.4
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 3.0e-16 90.5 111 46.8
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 8.7e-16 89.0 196 31.1
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-15 87.8 164 34.8
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 3.3e-15 87.0 162 37.7
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 3.3e-15 87.0 164 34.1
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 2.2e-14 84.3 172 35.5
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 2.2e-14 84.3 163 36.2
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.4e-13 81.6 171 35.1
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 5.3e-13 79.7 336 27.7
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-12 77.0 97 45.4
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 7.7e-12 75.9 157 34.4
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 1.0e-11 75.5 75 54.7
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-11 74.7 236 30.5
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 2.9e-11 73.9 244 32.0
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-10 71.6 72 50.0
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 9.4e-10 68.9 43 79.1
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 3.6e-09 67.0 180 31.1
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 1.0e-08 65.5 163 35.0
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 1.0e-08 65.5 163 35.0
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 2.5e-07 60.8 134 36.6
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 6.3e-06 56.2 151 31.8


User provided reference genes

Program Settings