Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g12958 Brassica carinata HOM05D017478 ORTHO05D021594 2.4e-34 148.3 74 100.0
BcaC03g12962 Brassica carinata HOM05D017478 ORTHO05D021594 2.4e-34 148.3 74 100.0
C02p01740 Brassica napus HOM05D017478 ORTHO05D021594 2.4e-34 148.3 74 100.0
C02p01770 Brassica napus HOM05D017478 ORTHO05D021594 2.4e-34 148.3 74 100.0
BcaC03g12985 Brassica carinata HOM05D017478 ORTHO05D021594 3.4e-33 144.4 74 97.3
C02p01490 Brassica napus HOM05D017478 ORTHO05D021594 9.9e-33 142.9 74 95.9
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 3.1e-26 121.3 60 98.3
BcaC03g12990 Brassica carinata HOM05D017478 ORTHO05D092415 2.6e-17 91.7 49 87.8
AL6G13250 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 2.4e-15 85.1 74 63.5
AT5G03720 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 7.1e-15 83.6 79 62.0
Sp6g39000 Schrenkiella parvula HOM05D000123 ORTHO05D000064 7.9e-14 80.1 75 61.3
Carub.0006s0264 Capsella rubella HOM05D000123 ORTHO05D000064 3.0e-13 78.2 72 61.1
Thhalv10013758m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 1.1e-12 76.3 74 62.2
A10p32380 Brassica napus HOM05D000123 ORTHO05D000064 7.4e-12 73.6 80 57.5
C09p73200 Brassica napus HOM05D000123 ORTHO05D000064 7.4e-12 73.6 80 57.5
BolC9t60055H Brassica oleracea HOM05D000123 ORTHO05D000064 7.4e-12 73.6 80 57.5
BraA10t45278Z Brassica rapa HOM05D000123 ORTHO05D000064 7.4e-12 73.6 80 57.5
CARHR209580 Cardamine hirsuta HOM05D000123 ORTHO05D000064 2.8e-11 71.6 77 57.1
BcaC06g32079 Brassica carinata HOM05D000123 ORTHO05D000064 3.1e-10 68.2 76 57.9


User provided reference genes

Program Settings