Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 8.7e-268 926.4 467 100.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-255 884.8 467 95.9
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-220 770.0 415 91.8
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-213 745.7 424 89.6
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 5.4e-209 731.1 424 88.7
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 7.5e-203 710.7 411 88.6
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 1.8e-201 706.1 449 82.2
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 9.2e-193 677.2 414 85.7
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-187 659.1 414 82.9
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 7.8e-176 620.9 462 71.4
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 2.4e-161 572.8 409 72.6
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 3.5e-160 568.9 357 84.6
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-151 540.4 411 68.4
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 4.3e-150 535.4 538 56.7
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 5.1e-143 511.9 552 54.9
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 3.4e-139 499.2 418 64.1
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 4.5e-139 498.8 452 60.0
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 4.5e-139 498.8 416 63.7
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 3.5e-136 489.2 463 58.1
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 6.7e-127 458.4 473 56.9
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 1.4e-124 450.7 549 50.5
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-121 440.3 310 72.9
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 5.5e-121 438.7 539 50.5
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-107 393.3 312 64.4
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 8.8e-103 378.3 393 54.5
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 9.8e-102 374.8 389 55.3
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-100 371.3 392 54.8
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 8.3e-93 345.1 268 70.5
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-86 322.4 212 75.0
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 8.3e-77 292.0 398 47.5
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 6.4e-69 265.8 273 58.6
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-67 261.2 398 43.5
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 4.6e-67 259.6 399 42.4
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 1.0e-66 258.5 400 43.5
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 3.0e-66 256.9 399 42.9
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 1.1e-65 255.0 399 42.6
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 5.6e-65 252.7 401 41.9
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 4.7e-64 249.6 390 42.6
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 6.8e-63 245.7 435 39.5
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 8.9e-63 245.4 438 38.6
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-62 243.8 433 38.6
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 2.6e-62 243.8 413 40.2
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-61 240.4 391 41.4
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 6.4e-61 239.2 403 40.9
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 6.4e-61 239.2 403 40.9
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-60 238.0 430 37.9
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 1.2e-59 235.0 446 37.2
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.1e-55 221.9 402 38.8
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 1.9e-52 211.1 398 38.4
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-48 198.4 252 46.8
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 4.2e-44 183.3 409 36.4
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 2.3e-42 177.6 127 70.1
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 5.1e-42 176.4 163 57.7
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 9.0e-39 165.6 267 42.7
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 8.4e-37 159.1 383 33.9
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 3.2e-36 157.1 166 54.2
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 4.2e-36 156.8 304 35.9
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 3.0e-34 150.6 199 45.2
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 2.8e-32 144.1 186 47.8
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-31 141.7 131 63.4
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-30 137.1 166 53.0
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 5.8e-30 136.3 389 30.8
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-28 132.1 194 39.7
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 3.0e-26 124.0 411 31.9
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 1.5e-25 121.7 368 31.2
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 4.3e-25 120.2 457 28.9
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 2.1e-24 117.9 428 28.5
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 2.8e-24 117.5 217 37.3
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 3.7e-24 117.1 83 68.7
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 3.4e-22 110.5 217 37.3
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.2e-21 107.8 373 30.6
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 5.0e-21 106.7 93 64.5
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-20 105.5 194 34.5
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-20 105.1 259 33.6
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 1.9e-20 104.8 115 52.2
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.9e-20 104.8 194 34.0
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 3.2e-20 104.0 410 25.9
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 4.6e-19 100.1 60 78.3
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 7.9e-19 99.4 191 38.7
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 1.3e-18 98.6 218 30.7
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 3.0e-18 97.4 386 25.9
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 3.9e-18 97.1 123 46.3
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 9.7e-17 92.4 173 34.7
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 3.7e-16 90.5 206 34.0
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 1.4e-15 88.6 162 38.3
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 3.4e-14 84.0 141 45.4
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 3.4e-14 84.0 147 38.1
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 7.7e-14 82.8 174 33.9
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-13 82.0 122 39.3
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 8.5e-13 79.3 76 56.6
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 5.5e-12 76.6 160 33.1
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-11 75.5 64 60.9
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.6e-11 75.1 208 31.2
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 3.6e-11 73.9 75 53.3
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.1e-09 68.9 62 51.6
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 1.1e-09 68.9 164 36.0
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 1.1e-09 68.9 164 36.0
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-09 68.6 70 50.0
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 4.3e-09 67.0 371 25.6
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 6.3e-08 63.2 134 37.3
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 8.2e-08 62.8 368 25.0
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 8.2e-08 62.8 368 25.0
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 3.4e-06 57.4 155 28.4
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 5.9e-06 56.6 28 85.7


User provided reference genes

Program Settings