Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01660 Brassica napus HOM05D008152 ORTHO05D010231 2.2e-24 114.8 56 100.0
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 5.4e-23 110.2 54 100.0
BcaB05g21787 Brassica carinata HOM05D008152 ORTHO05D010231 7.3e-20 99.8 58 89.7
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 4.7e-19 97.1 54 94.4
Sp6g38660 Schrenkiella parvula HOM05D008152 ORTHO05D010231 2.0e-17 91.7 56 82.1
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 1.7e-13 78.6 54 77.8
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 1.9e-12 75.1 54 75.9
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 5.6e-12 73.6 54 74.1
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 7.3e-12 73.2 54 74.1
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 1.2e-11 72.4 54 74.1
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 8.9e-10 66.2 52 71.2
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 1.2e-09 65.9 46 76.1
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 1.2e-09 65.9 55 70.9
AT5G04080 Arabidopsis thaliana HOM05D008152 ORTHO05D010231 2.6e-09 64.7 47 76.6
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 1.3e-08 62.4 54 68.5
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 2.2e-08 61.6 46 71.7
BcaB01g05882 Brassica carinata HOM05D008152 ORTHO05D010231 1.1e-07 59.3 55 63.6
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 1.1e-07 59.3 55 63.6
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 1.1e-07 59.3 55 63.6
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 3.2e-07 57.8 55 61.8
BolC3t12740H Brassica oleracea HOM05D008152 ORTHO05D010231 3.2e-07 57.8 55 61.8
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 1.2e-06 55.8 55 61.8


User provided reference genes

Program Settings