Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-241 838.6 405 100.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 1.8e-224 782.3 400 95.2
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 4.1e-221 771.2 415 91.8
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-213 746.1 400 91.0
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 3.6e-209 731.5 400 90.0
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 5.5e-202 707.6 387 89.9
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-196 689.5 399 86.2
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 8.0e-193 677.2 399 85.2
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 5.7e-183 644.4 459 72.8
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 2.8e-169 599.0 394 76.9
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 4.0e-168 595.1 405 75.6
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-154 550.1 396 69.9
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 3.6e-153 545.4 357 78.7
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-146 523.1 397 67.3
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-146 523.1 403 67.2
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-146 523.1 422 66.6
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.9e-146 523.1 405 67.7
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 8.1e-145 517.7 404 67.8
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 4.9e-142 508.4 432 62.5
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 1.8e-128 463.4 394 64.2
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 2.4e-128 463.0 424 60.8
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 5.3e-128 461.8 295 78.6
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 5.1e-123 445.3 415 61.0
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-114 416.8 297 69.0
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 7.9e-108 394.8 378 56.9
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-106 390.6 374 58.6
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-105 387.1 377 58.1
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-85 318.9 211 78.7
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-84 317.8 212 74.1
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 5.3e-72 275.8 421 42.3
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-71 273.9 420 42.9
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-71 273.1 382 45.8
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 1.3e-70 271.2 384 44.8
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 2.9e-70 270.0 418 41.6
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 5.0e-70 269.2 385 46.0
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 1.5e-69 267.7 384 44.8
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 5.5e-69 265.8 384 45.1
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-69 265.8 415 41.2
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 2.1e-68 263.8 431 40.4
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 2.7e-68 263.5 386 43.8
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 1.8e-67 260.8 375 44.5
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 1.2e-66 258.1 234 62.4
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-66 255.8 224 64.7
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 1.7e-65 254.2 400 42.2
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 2.8e-65 253.4 376 43.9
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.7e-63 246.9 388 42.5
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.7e-63 246.9 388 42.5
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.8e-59 234.2 385 41.3
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 1.8e-56 224.2 377 39.0
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-53 214.5 248 48.4
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 5.0e-46 189.5 385 37.9
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 8.6e-46 188.7 148 64.9
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 4.0e-43 179.9 130 69.2
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 7.0e-40 169.1 267 43.4
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 9.2e-40 168.7 171 56.1
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-39 168.3 366 34.4
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 1.6e-39 167.9 151 59.6
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 7.8e-39 165.6 289 37.7
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 2.3e-35 154.1 199 45.2
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 3.7e-33 146.7 374 32.9
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 6.4e-33 146.0 179 43.6
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 1.7e-30 137.9 354 34.7
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 3.0e-30 137.1 401 31.9
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 5.1e-30 136.3 398 33.2
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 1.5e-29 134.8 370 31.9
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 3.3e-29 133.7 202 41.6
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 4.4e-26 123.2 202 39.1
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 2.9e-25 120.6 98 67.3
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 2.9e-25 120.6 397 27.5
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.1e-24 118.6 360 31.9
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 5.4e-24 116.3 179 39.1
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 9.2e-24 115.5 179 38.5
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 3.5e-23 113.6 373 27.6
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 4.6e-23 113.2 83 67.5
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 4.6e-23 113.2 195 34.9
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 1.0e-22 112.1 101 60.4
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-21 107.8 259 34.0
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 9.6e-21 105.5 272 34.2
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 2.1e-20 104.4 109 53.2
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 6.2e-20 102.8 132 49.2
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 1.1e-19 102.1 60 80.0
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 5.3e-19 99.8 195 37.9
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-18 98.2 133 45.1
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 5.8e-18 96.3 171 36.8
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 9.9e-18 95.5 162 39.5
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 6.4e-17 92.8 83 62.7
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.6e-15 88.2 188 35.1
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-15 88.2 89 55.1
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 3.9e-14 83.6 195 34.4
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 6.6e-14 82.8 100 45.0
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.1e-13 82.0 353 26.3
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.1e-13 82.0 174 34.5
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 4.3e-13 80.1 340 26.2
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 7.3e-13 79.3 76 56.6
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 6.2e-12 76.3 64 60.9
BolC4t25347H Brassica oleracea HOM05D010965 ORTHO05D016023 6.2e-12 76.3 340 25.3
BcaC02g09040 Brassica carinata HOM05D010965 ORTHO05D016023 1.8e-11 74.7 340 25.3
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 2.4e-11 74.3 75 53.3
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 3.1e-11 73.9 356 26.7
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 3.1e-11 73.9 356 26.7
A04p05130 Brassica napus HOM05D010965 ORTHO05D016023 1.2e-10 72.0 264 28.0
A05p24100 Brassica napus HOM05D000075 ORTHO05D014840 1.2e-10 72.0 164 35.4
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 1.5e-10 71.6 336 26.5
C04p37700 Brassica napus HOM05D010965 ORTHO05D016023 2.0e-10 71.2 298 26.2
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 3.4e-10 70.5 63 50.8
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 9.9e-10 68.9 134 37.3
Thhalv10014870m.g Eutrema salsugineum HOM05D007309 ORTHO05D014840 9.9e-10 68.9 178 33.1
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-09 68.6 72 48.6
BraA05t21290Z Brassica rapa HOM05D000075 ORTHO05D014840 1.3e-09 68.6 164 34.8
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 4.2e-08 63.5 199 28.6
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 5.4e-08 63.2 201 27.9
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 9.3e-08 62.4 111 36.9
A04p22450 Brassica napus HOM05D000075 ORTHO05D014840 1.6e-07 61.6 155 29.7
C04p58590 Brassica napus HOM05D000075 ORTHO05D014840 1.6e-07 61.6 86 45.3
C01p42830 Brassica napus HOM05D011241 ORTHO05D016779 2.1e-07 61.2 267 27.0
BcaB06g28307 Brassica carinata HOM05D000075 ORTHO05D014840 1.0e-06 58.9 140 34.3
BolC4t27377H Brassica oleracea HOM05D000075 ORTHO05D014840 2.3e-06 57.8 74 45.9
AUR62030141 Chenopodium quinoa HOM05D001456 ORTHO05D002799 2.3e-06 57.8 119 30.3
AUR62002684 Chenopodium quinoa HOM05D001456 ORTHO05D002799 3.9e-06 57.0 167 29.9
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 5.1e-06 56.6 28 85.7
GSVIVG01028213001 Vitis vinifera HOM05D001456 ORTHO05D002799 8.7e-06 55.8 136 30.1


User provided reference genes

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