Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-146 521.9 250 100.0
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 2.9e-145 518.5 250 99.6
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 1.8e-110 402.9 193 99.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-99 367.1 253 75.5
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 2.3e-97 359.4 254 75.6
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-95 352.4 268 70.5
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 3.1e-86 322.4 221 76.0
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 4.0e-86 322.0 211 78.7
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-85 320.1 221 75.6
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 1.5e-85 320.1 260 66.2
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 1.2e-82 310.5 221 74.7
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-82 310.1 252 65.9
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 4.6e-82 308.5 254 65.4
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 2.5e-80 302.8 325 52.0
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 6.2e-79 298.1 327 54.4
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 9.9e-77 290.8 199 75.4
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 9.9e-77 290.8 236 67.4
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 3.8e-76 288.9 330 52.7
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-74 283.1 355 50.1
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-68 263.5 200 70.5
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-67 258.5 198 69.2
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 3.5e-66 255.8 202 68.8
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 4.6e-66 255.4 201 68.2
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 9.6e-64 247.7 245 59.2
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 1.8e-62 243.4 235 57.0
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 2.5e-59 233.0 174 69.5
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 2.5e-59 233.0 174 69.5
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 2.1e-58 229.9 179 68.2
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 3.2e-51 206.1 127 83.5
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-49 201.1 100 97.0
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 3.0e-49 199.5 171 60.2
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 1.9e-48 196.8 150 69.3
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 2.2e-47 193.4 171 58.5
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 4.8e-47 192.2 171 58.5
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 9.1e-46 188.0 171 57.3
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 2.0e-45 186.8 175 56.6
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 3.4e-45 186.0 174 56.9
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 3.4e-45 186.0 174 56.9
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 5.0e-44 182.2 171 56.1
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 6.7e-41 171.8 170 52.9
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 1.5e-40 170.6 148 60.8
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 4.4e-40 169.1 101 83.2
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 7.7e-37 158.3 139 60.4
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-36 156.4 188 46.8
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 5.0e-36 155.6 188 44.7
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 8.5e-36 154.8 188 44.7
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 2.5e-35 153.3 188 44.1
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 3.2e-35 152.9 187 42.8
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 3.2e-35 152.9 187 42.8
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-35 152.1 164 53.0
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 1.6e-34 150.6 187 42.8
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 1.6e-34 150.6 179 48.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.1e-34 150.2 179 49.2
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 4.7e-34 149.1 187 41.7
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 7.9e-34 148.3 146 57.5
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-32 143.3 178 43.3
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 3.1e-30 136.3 199 41.7
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 7.7e-29 131.7 155 51.0
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.3e-28 131.0 192 39.1
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 1.6e-26 124.0 177 37.3
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 8.0e-26 121.7 174 39.7
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.0e-25 121.3 174 39.1
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 1.0e-25 121.3 82 74.4
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 2.3e-25 120.2 164 40.2
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 2.4e-22 110.2 104 59.6
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 2.4e-22 110.2 113 55.8
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 1.0e-20 104.8 161 35.4
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 4.2e-19 99.4 73 72.6
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 1.6e-18 97.4 186 37.6
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.7e-18 96.7 195 34.9
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.7e-18 96.7 195 34.9
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 4.0e-17 92.8 89 56.2
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-16 91.3 131 41.2
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 1.7e-15 87.4 171 36.3
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 8.3e-15 85.1 152 38.2
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 8.3e-15 85.1 111 45.0
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 8.3e-15 85.1 174 29.3
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-14 82.8 60 68.3
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 5.4e-14 82.4 191 30.9
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 9.1e-14 81.6 199 27.1
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 6.5e-12 75.5 78 52.6
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 6.5e-12 75.5 97 42.3
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.5e-11 74.3 59 54.2
Carub.0001s3469 Capsella rubella HOM05D001456 ORTHO05D010099 1.9e-11 73.9 139 33.8
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-09 67.8 56 60.7
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 1.4e-09 67.8 56 60.7
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-08 64.7 29 93.1
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 2.6e-08 63.5 161 28.6
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 5.7e-08 62.4 106 35.8
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 7.5e-08 62.0 106 35.8
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 7.5e-08 62.0 106 35.8
AUR62030141 Chenopodium quinoa HOM05D001456 ORTHO05D002799 1.7e-07 60.8 111 31.5
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 2.2e-07 60.5 106 34.0
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 2.2e-07 60.5 106 34.0
BraA09t40689Z Brassica rapa HOM05D001456 ORTHO05D011781 2.8e-07 60.1 107 33.6
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 8.3e-07 58.5 107 32.7
PGR031G2483 Punica granatum HOM05D001456 ORTHO05D002799 8.3e-07 58.5 234 22.6
Nn3g21907 Nelumbo nucifera HOM05D001456 ORTHO05D002799 1.4e-06 57.8 141 28.4
Oeu044758.1 Olea europaea HOM05D001456 ORTHO05D002799 1.4e-06 57.8 141 27.0
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 1.8e-06 57.4 107 31.8
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 1.8e-06 57.4 107 31.8
SEGI_20611 Sequoiadendron giganteum HOM05D001456 ORTHO05D004886 1.8e-06 57.4 142 26.8
GSVIVG01028213001 Vitis vinifera HOM05D001456 ORTHO05D002799 1.8e-06 57.4 135 28.1
Os07g0637200 Oryza sativa ssp. japonica HOM05D001456 ORTHO05D002799 2.4e-06 57.0 135 27.4
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 3.1e-06 56.6 28 85.7
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 5.4e-06 55.8 92 34.8
Eucgr.H01318 Eucalyptus grandis HOM05D001456 ORTHO05D002799 9.2e-06 55.1 135 28.1


User provided reference genes

Program Settings