Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 4.7e-185 651.0 311 100.0
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 8.0e-169 597.0 290 99.0
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-167 592.4 290 98.3
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 2.7e-156 555.4 278 96.0
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 4.2e-133 478.4 295 81.4
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 5.3e-128 461.5 295 78.6
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 2.0e-127 459.5 279 82.1
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 6.4e-126 454.5 295 78.0
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 6.7e-123 444.5 298 75.8
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 7.4e-122 441.0 310 72.9
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-119 432.6 295 75.9
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 3.2e-117 425.6 209 95.7
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 3.3e-114 415.6 304 70.7
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-112 408.7 301 70.8
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 4.1e-112 408.7 295 71.9
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 4.1e-112 408.7 301 70.8
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-110 404.1 298 70.5
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 1.3e-110 403.7 301 70.1
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-110 403.3 293 71.0
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 3.8e-110 402.1 295 70.2
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 1.9e-109 399.8 324 65.1
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 4.1e-104 382.1 310 67.4
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-94 350.9 296 64.5
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 5.0e-94 348.6 253 71.5
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 6.5e-94 348.2 293 64.2
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 1.0e-83 314.3 302 57.6
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 3.1e-80 302.8 296 58.4
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 2.7e-79 299.7 299 57.9
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 1.6e-71 273.9 127 98.4
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 5.0e-62 242.3 308 48.1
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-61 240.7 305 48.2
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 3.3e-61 239.6 307 47.2
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 9.5e-61 238.0 307 46.6
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 1.2e-60 237.7 307 46.3
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 1.6e-60 237.3 305 47.2
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 6.8e-59 231.9 298 46.6
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-56 224.6 301 44.2
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-53 214.2 329 43.2
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 2.5e-53 213.4 315 42.2
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 3.3e-53 213.0 327 41.9
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 1.4e-51 207.6 332 42.2
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-49 200.7 100 97.0
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 1.1e-48 198.0 342 40.4
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 1.4e-48 197.6 304 41.4
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 1.4e-48 197.6 328 40.9
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 5.1e-46 189.1 326 41.1
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 5.1e-46 189.1 326 41.1
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 1.2e-42 177.9 81 98.8
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 7.6e-42 175.3 215 49.8
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 1.7e-38 164.1 324 38.0
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-37 161.0 95 84.2
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 6.2e-36 155.6 268 42.5
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 8.1e-36 155.2 175 50.9
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-33 146.7 315 39.4
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 1.1e-32 144.8 195 44.1
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 4.8e-28 129.4 87 77.0
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 2.4e-27 127.1 212 42.5
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 2.4e-27 127.1 254 36.6
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 6.9e-27 125.6 266 36.1
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 1.3e-25 121.3 198 40.9
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 2.9e-25 120.2 284 31.7
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 2.9e-25 120.2 284 31.7
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 6.4e-25 119.0 284 33.1
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 7.3e-21 105.5 278 33.1
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 1.4e-19 101.3 156 41.0
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 5.3e-19 99.4 284 31.0
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 7.6e-18 95.5 173 34.7
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-17 94.7 96 49.0
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 4.9e-17 92.8 294 28.2
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 1.1e-16 91.7 68 70.6
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 1.9e-16 90.9 60 68.3
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 2.4e-16 90.5 104 45.2
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 5.5e-16 89.4 294 28.6
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.2e-15 88.2 102 45.1
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.0e-14 85.1 186 34.4
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 2.5e-13 80.5 172 34.3
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 4.3e-13 79.7 119 43.7
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-12 78.2 298 28.2
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.6e-12 77.8 79 48.1
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 2.1e-12 77.4 79 48.1
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 3.7e-12 76.6 69 59.4
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.1e-11 75.1 62 53.2
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 6.9e-11 72.4 88 40.9
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-10 70.9 70 55.7
C07p13270 Brassica napus HOM05D023794 ORTHO05D028264 4.5e-10 69.7 160 32.5
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.0e-09 68.6 229 27.1
Thhalv10014870m.g Eutrema salsugineum HOM05D007309 ORTHO05D014840 1.7e-09 67.8 173 32.9
A04p05130 Brassica napus HOM05D010965 ORTHO05D016023 2.9e-09 67.0 257 29.2
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 2.9e-09 67.0 260 29.6
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 6.5e-09 65.9 260 29.6
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 1.4e-08 64.7 287 25.8
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 1.2e-07 61.6 241 29.5
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 3.5e-07 60.1 118 38.1
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 7.9e-07 58.9 81 43.2
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 3.9e-06 56.6 28 85.7
BolC7t41820H Brassica oleracea HOM05D023794 ORTHO05D028264 5.1e-06 56.2 142 31.7


User provided reference genes

Program Settings