Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p01340 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-265 919.5 440 100.0
BcaC03g12986 Brassica carinata HOM05D007309 ORTHO05D010099 4.9e-228 794.3 383 99.0
BolC2t06110H Brassica oleracea HOM05D007309 ORTHO05D010099 9.5e-208 726.9 433 85.0
BcaC03g12963 Brassica carinata HOM05D007309 ORTHO05D010099 1.6e-183 646.4 447 74.7
C02p01720 Brassica napus HOM05D007309 ORTHO05D010099 3.5e-178 628.6 462 71.4
C02p01750 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-175 619.0 415 76.4
C02p01480 Brassica napus HOM05D007309 ORTHO05D010099 8.7e-169 597.4 405 75.6
C02p01380 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-167 592.4 290 98.3
BcaC03g12960 Brassica carinata HOM05D007309 ORTHO05D010099 2.9e-164 582.4 402 75.4
BcaB05g21772 Brassica carinata HOM05D007309 ORTHO05D010099 7.9e-162 574.3 395 74.2
BcaC03g12961 Brassica carinata HOM05D007309 ORTHO05D010099 8.7e-161 570.9 415 72.3
BcaC03g12957 Brassica carinata HOM05D007309 ORTHO05D010099 5.7e-152 541.6 394 71.6
C02p01780 Brassica napus HOM05D007309 ORTHO05D010099 1.8e-150 536.6 392 70.9
BraA02t04799Z Brassica rapa HOM05D007309 ORTHO05D010099 6.5e-148 528.1 522 55.9
C02p01800 Brassica napus HOM05D007309 ORTHO05D010099 1.0e-145 520.8 553 55.0
C02p01460 Brassica napus HOM05D007309 ORTHO05D010099 6.7e-145 518.1 250 99.6
C02p01790 Brassica napus HOM05D007309 ORTHO05D010099 1.7e-143 513.5 402 67.9
BcaB05g21775 Brassica carinata HOM05D007309 ORTHO05D010099 2.4e-142 509.6 436 62.2
BolC2t06135H Brassica oleracea HOM05D007309 ORTHO05D010099 4.1e-142 508.8 403 67.7
BcaC03g12956 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-141 506.1 446 63.0
BcaC03g12991 Brassica carinata HOM05D007309 ORTHO05D010099 5.9e-141 505.0 455 61.5
BraA02t04794Z Brassica rapa HOM05D007309 ORTHO05D010099 1.1e-139 500.7 540 55.0
BolC2t06134H Brassica oleracea HOM05D007309 ORTHO05D010099 1.9e-131 473.4 353 71.1
BcaC03g12955 Brassica carinata HOM05D007309 ORTHO05D010099 5.5e-131 471.9 522 53.6
C02p01240 Brassica napus HOM05D007309 ORTHO05D010099 1.3e-116 424.1 209 95.2
BcaB05g21785 Brassica carinata HOM05D007309 ORTHO05D010099 3.0e-113 412.9 298 71.1
BcaB05g21792 Brassica carinata HOM05D007309 ORTHO05D010099 1.7e-108 397.1 378 58.2
BcaC03g12970 Brassica carinata HOM05D007309 ORTHO05D010099 2.6e-104 383.3 373 58.2
C02p01630 Brassica napus HOM05D007309 ORTHO05D010099 2.2e-103 380.2 376 57.7
BolC2t06111H Brassica oleracea HOM05D007309 ORTHO05D010099 1.6e-90 337.4 380 52.9
C02p01200 Brassica napus HOM05D007309 ORTHO05D010099 1.1e-81 308.1 254 65.4
BcaC09g51621 Brassica carinata HOM05D007309 ORTHO05D010099 1.3e-74 284.6 398 44.7
A01p09730 Brassica napus HOM05D007309 ORTHO05D010099 6.2e-74 282.3 396 43.7
C02p01450 Brassica napus HOM05D007309 ORTHO05D010099 7.6e-72 275.4 127 99.2
BraA01t00916Z Brassica rapa HOM05D007309 ORTHO05D010099 9.9e-72 275.0 401 43.6
C02p02060 Brassica napus HOM05D007309 ORTHO05D021684 2.7e-69 266.9 398 43.0
C02p01710 Brassica napus HOM05D007309 ORTHO05D010099 4.6e-69 266.2 395 43.0
BolC2t06164H Brassica oleracea HOM05D007309 ORTHO05D021684 7.9e-69 265.4 397 42.3
A01p10480 Brassica napus HOM05D007309 ORTHO05D010099 2.3e-68 263.8 397 42.6
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 3.9e-68 263.1 392 42.6
BolC2t06133H Brassica oleracea HOM05D007309 ORTHO05D021684 5.1e-68 262.7 395 42.3
BraA01t00993Z Brassica rapa HOM05D007309 ORTHO05D010099 1.1e-67 261.5 411 41.8
BcaC03g13124 Brassica carinata HOM05D007309 ORTHO05D021684 3.3e-67 260.0 397 41.6
BcaC03g13128 Brassica carinata HOM05D007309 ORTHO05D021684 3.3e-67 260.0 397 41.3
BolC2t06167H Brassica oleracea HOM05D007309 ORTHO05D021684 1.6e-66 257.7 388 41.8
BcaC03g17362 Brassica carinata HOM05D007309 ORTHO05D032575 2.1e-66 257.3 399 43.1
C02p53010 Brassica napus HOM05D007309 ORTHO05D032575 2.1e-66 257.3 399 43.1
BolC2t07109H Brassica oleracea HOM05D007309 ORTHO05D040036 4.9e-63 246.1 394 40.9
BolC2t11370H Brassica oleracea HOM05D007309 ORTHO05D032575 7.4e-59 232.3 397 40.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 8.1e-58 228.8 383 39.9
BcaC05g26633 Brassica carinata HOM05D007309 ORTHO05D010099 2.7e-53 213.8 397 41.6
C02p01290 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-51 206.1 127 83.5
BcaC06g31633 Brassica carinata HOM05D007309 ORTHO05D010099 1.1e-49 201.8 245 48.2
BcaB05g21793 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-48 198.0 150 69.3
C02p01280 Brassica napus HOM05D007309 ORTHO05D010099 5.7e-43 179.5 81 100.0
Thhalv10014127m.g Eutrema salsugineum HOM05D007309 ORTHO05D010099 1.2e-40 171.8 292 38.7
BolC1t01103H Brassica oleracea HOM05D007309 ORTHO05D010099 2.0e-40 171.0 148 60.8
BcaC03g12971 Brassica carinata HOM05D007309 ORTHO05D010099 5.5e-38 162.9 368 35.1
BolC2t06143H Brassica oleracea HOM05D007309 ORTHO05D010099 1.4e-36 158.3 139 60.4
BolC2t06128H Brassica oleracea HOM05D007309 ORTHO05D010099 2.0e-35 154.5 268 42.2
C02p01410 Brassica napus HOM05D007309 ORTHO05D010099 9.7e-35 152.1 164 53.0
Carub.0004s1446 Capsella rubella HOM05D007309 ORTHO05D015909 3.7e-34 150.2 361 30.7
Carub.0004s1451 Capsella rubella HOM05D007309 ORTHO05D015909 6.3e-34 149.4 387 30.2
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 6.9e-33 146.0 195 44.6
A04p22460 Brassica napus HOM05D007309 ORTHO05D010099 2.6e-32 144.1 181 43.1
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 5.9e-32 142.9 348 33.0
AL5G13820 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 2.2e-31 141.0 201 39.3
BcaC03g12964 Brassica carinata HOM05D007309 ORTHO05D010099 6.5e-31 139.4 394 31.0
AL4G34490 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.5e-30 137.5 336 32.7
C01p11350 Brassica napus HOM05D007309 ORTHO05D010099 1.5e-27 128.3 254 37.0
BolC1t01104H Brassica oleracea HOM05D007309 ORTHO05D010099 4.4e-27 126.7 266 36.5
BraA09t38661Z Brassica rapa HOM05D007309 ORTHO05D010099 9.7e-27 125.6 180 37.2
C04p58600 Brassica napus HOM05D007309 ORTHO05D010099 6.3e-26 122.9 177 39.5
Carub.0004s1897 Capsella rubella HOM05D007309 ORTHO05D015909 6.3e-26 122.9 388 29.4
AL4G33320 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 8.2e-26 122.5 385 27.8
BolC4t27378H Brassica oleracea HOM05D007309 ORTHO05D010099 1.1e-25 122.1 177 39.0
AL4G19130 Arabidopsis lyrata HOM05D007309 ORTHO05D010099 1.4e-25 121.7 171 39.8
BraA02t04778Z Brassica rapa HOM05D007309 ORTHO05D010099 1.8e-25 121.3 82 74.4
AL4G34290 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 2.6e-24 117.5 350 30.3
C03p38220 Brassica napus HOM05D007309 ORTHO05D032970 3.6e-21 107.1 104 58.7
BolC3t16103H Brassica oleracea HOM05D007309 ORTHO05D032970 3.6e-21 107.1 113 54.9
AL4G34570 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 8.8e-20 102.4 328 28.7
C02p01680 Brassica napus HOM05D007309 ORTHO05D014840 1.5e-19 101.7 156 41.0
BcaC01g05143 Brassica carinata HOM05D007309 ORTHO05D031751 1.3e-18 98.6 187 36.9
AL5G13790 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.1e-17 95.5 173 34.7
BcaB05g21782 Brassica carinata HOM05D007309 ORTHO05D010099 7.0e-17 92.8 89 56.2
BolC2t06136H Brassica oleracea HOM05D007309 ORTHO05D010099 9.1e-17 92.4 60 70.0
C02p01690 Brassica napus HOM05D007309 ORTHO05D010099 2.0e-16 91.3 131 41.2
BolC2t06144H Brassica oleracea HOM05D007309 ORTHO05D027345 5.0e-15 86.7 171 36.3
AL4G19150 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 1.1e-14 85.5 186 34.4
BcaNung05912 Brassica carinata HOM05D007309 ORTHO05D010099 1.5e-14 85.1 111 45.0
A04p04180 Brassica napus HOM05D010965 ORTHO05D024278 5.5e-14 83.2 330 27.3
AL4G33400 Arabidopsis lyrata HOM05D007309 ORTHO05D015909 7.2e-14 82.8 315 26.3
BcaB05g21774 Brassica carinata HOM05D007309 ORTHO05D010099 7.2e-14 82.8 60 68.3
BraA04t16224Z Brassica rapa HOM05D010965 ORTHO05D016023 2.7e-13 80.9 288 28.5
AL9U11090 Arabidopsis lyrata HOM05D007309 ORTHO05D014840 3.6e-13 80.5 172 34.3
Carub.0001s3469 Capsella rubella HOM05D001456 ORTHO05D010099 1.0e-12 79.0 174 31.6
BcaB02g08395 Brassica carinata HOM05D010965 ORTHO05D016023 1.4e-12 78.6 287 29.6
BcaC01g06784 Brassica carinata HOM05D007309 ORTHO05D032970 1.2e-11 75.5 78 52.6
BcaC02g08085 Brassica carinata HOM05D000075 ORTHO05D014840 1.5e-11 75.1 62 53.2
C02p01350 Brassica napus HOM05D007309 ORTHO05D010099 2.8e-10 70.9 70 55.7
C07p13270 Brassica napus HOM05D023794 ORTHO05D028264 6.3e-10 69.7 161 32.9
Thhalv10014870m.g Eutrema salsugineum HOM05D007309 ORTHO05D014840 8.3e-10 69.3 173 33.5
BcaC02g09794 Brassica carinata HOM05D010965 ORTHO05D024278 3.1e-09 67.4 182 28.6
A04p05130 Brassica napus HOM05D010965 ORTHO05D016023 3.1e-09 67.4 257 29.2
BraA04t16134Z Brassica rapa HOM05D010965 ORTHO05D024278 5.4e-09 66.6 190 26.8
C04p36520 Brassica napus HOM05D010965 ORTHO05D024278 4.5e-08 63.5 114 36.0
BolC4t25144H Brassica oleracea HOM05D010965 ORTHO05D024278 4.5e-08 63.5 114 36.0
AUR62030141 Chenopodium quinoa HOM05D001456 ORTHO05D002799 7.7e-08 62.8 117 30.8
Oeu044758.1 Olea europaea HOM05D001456 ORTHO05D002799 1.0e-07 62.4 153 28.8
Thhalv10027969m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 1.3e-07 62.0 161 28.0
BcaB05g22427 Brassica carinata HOM05D007309 ORTHO05D093831 5.0e-07 60.1 118 38.1
PGR031G2483 Punica granatum HOM05D001456 ORTHO05D002799 5.0e-07 60.1 234 23.1
Nn3g21907 Nelumbo nucifera HOM05D001456 ORTHO05D002799 8.5e-07 59.3 141 28.4
SEGI_20611 Sequoiadendron giganteum HOM05D001456 ORTHO05D004886 1.1e-06 58.9 142 26.8
BraA09t40689Z Brassica rapa HOM05D001456 ORTHO05D011781 1.5e-06 58.5 107 32.7
BcaNung03075 Brassica carinata HOM05D001636 ORTHO05D009134 1.9e-06 58.2 348 22.1
BolC7t45530H Brassica oleracea HOM05D001636 ORTHO05D009134 1.9e-06 58.2 348 22.1
GSVIVG01028213001 Vitis vinifera HOM05D001456 ORTHO05D002799 1.9e-06 58.2 135 29.6
AUR62002684 Chenopodium quinoa HOM05D001456 ORTHO05D002799 2.5e-06 57.8 274 23.0
C07p50280 Brassica napus HOM05D001636 ORTHO05D009134 3.2e-06 57.4 348 22.1
Os07g0637200 Oryza sativa ssp. japonica HOM05D001456 ORTHO05D002799 3.2e-06 57.4 135 27.4
A09p52590 Brassica napus HOM05D001456 ORTHO05D011781 4.2e-06 57.0 107 31.8
C02p01400 Brassica napus HOM05D007309 ORTHO05D010099 5.5e-06 56.6 28 85.7
BraA02t09089Z Brassica rapa HOM05D001456 ORTHO05D002799 5.5e-06 56.6 145 29.7
Eucgr.H01318 Eucalyptus grandis HOM05D001456 ORTHO05D002799 5.5e-06 56.6 135 28.1
Thhalv10003670m.g Eutrema salsugineum HOM05D001456 ORTHO05D014991 5.5e-06 56.6 135 28.1
Thhalv10006264m.g Eutrema salsugineum HOM05D001456 ORTHO05D011781 5.5e-06 56.6 91 35.2
BolC7t41820H Brassica oleracea HOM05D023794 ORTHO05D028264 7.2e-06 56.2 143 32.2
BraA10t45076Z Brassica rapa HOM05D001260 ORTHO05D002424 7.2e-06 56.2 95 35.8
C08p35340 Brassica napus HOM05D001456 ORTHO05D011781 9.4e-06 55.8 107 30.8
BolC8t51127H Brassica oleracea HOM05D001456 ORTHO05D011781 9.4e-06 55.8 107 30.8


User provided reference genes

Program Settings