Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.4e-70 268.9 146 100.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.4e-70 268.9 146 100.0
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 3.4e-61 238.4 135 94.8
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.7e-60 236.1 135 94.1
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 4.9e-60 234.6 135 92.6
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 4.9e-60 234.6 135 92.6
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 3.9e-57 224.9 135 89.6
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 8.1e-55 217.2 135 87.4
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.6e-53 212.2 135 85.9
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 3.8e-52 208.4 135 84.4
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 4.6e-50 201.4 135 84.4
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 4.6e-50 201.4 123 87.0
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 1.0e-49 200.3 134 79.1
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.0e-49 200.3 135 85.2
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.9e-49 198.4 135 80.7
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-48 196.1 135 83.7
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-48 196.1 135 83.7
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.9e-48 196.1 135 83.7
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 9.6e-48 193.7 135 83.0
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 2.8e-47 192.2 135 82.2
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-44 183.0 149 73.8
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 7.2e-35 151.0 127 65.4
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 4.6e-34 148.3 124 65.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 4.6e-34 148.3 123 63.4
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 6.7e-33 144.4 130 60.0
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 6.7e-33 144.4 129 58.9
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 8.8e-33 144.1 112 64.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 8.8e-33 144.1 130 62.3
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.3e-32 142.1 131 62.6
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 5.7e-32 141.4 132 59.8
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 9.7e-32 140.6 134 59.0
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.2e-31 139.4 130 62.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 2.8e-31 139.0 127 59.8
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.7e-31 138.7 127 59.8
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 6.3e-31 137.9 126 61.9
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 3.1e-30 135.6 109 65.1
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 4.1e-30 135.2 100 69.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 5.3e-30 134.8 128 57.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 5.3e-30 134.8 123 60.2
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.9e-30 134.4 123 61.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 6.9e-30 134.4 124 62.1
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 9.1e-30 134.0 90 73.3
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 9.1e-30 134.0 124 58.9
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.6e-29 132.5 123 58.5
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.4e-29 132.1 131 58.8
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 4.5e-29 131.7 127 59.1
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 4.5e-29 131.7 105 61.0
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 7.7e-29 131.0 129 61.2
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 7.7e-29 131.0 130 57.7
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-28 129.8 115 67.0
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.7e-28 129.8 101 64.4
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 1.7e-28 129.8 130 57.7
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.9e-28 129.0 120 60.0
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 3.8e-28 128.6 123 60.2
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 5.0e-28 128.3 123 57.7
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 8.5e-28 127.5 121 58.7
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.4e-27 126.7 123 56.9
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.4e-27 126.7 103 61.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.4e-27 126.7 100 65.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.5e-27 125.9 132 56.8
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 3.2e-27 125.6 128 55.5
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 3.2e-27 125.6 109 61.5
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.2e-27 125.6 123 58.5
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 4.2e-27 125.2 123 56.9
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 5.5e-27 124.8 129 51.9
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 9.4e-27 124.0 128 54.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.6e-26 123.2 100 63.0
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.1e-26 122.9 121 55.4
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.7e-26 122.5 132 52.3
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.6e-26 122.1 99 60.6
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.6e-26 122.1 121 57.9
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 3.6e-26 122.1 121 57.0
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 6.1e-26 121.3 132 51.5
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 6.1e-26 121.3 130 54.6
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 7.9e-26 120.9 132 49.2
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.0e-25 120.6 101 59.4
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.0e-25 120.6 133 51.9
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.0e-25 120.6 135 52.6
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.0e-25 120.6 94 60.6
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.0e-25 120.6 121 56.2
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.4e-25 120.2 121 56.2
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 3.9e-25 118.6 111 54.1
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 3.9e-25 118.6 123 56.1
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 1.5e-24 116.7 128 53.1
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.6e-24 115.9 102 60.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 5.7e-24 114.8 121 55.4
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.7e-24 114.0 107 57.9
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.7e-23 113.2 121 53.7
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 2.2e-23 112.8 98 61.2
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.8e-23 112.5 105 58.1
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 4.8e-23 111.7 134 51.5
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 4.8e-23 111.7 134 50.7
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 6.3e-23 111.3 133 48.9
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 8.2e-23 110.9 81 67.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.8e-22 109.8 125 52.0
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-22 109.8 121 52.9
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 5.3e-22 108.2 115 53.9
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 7.0e-22 107.8 133 48.1
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 9.1e-22 107.5 86 60.5
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 2.0e-21 106.3 107 54.2
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.0e-21 106.3 105 56.2
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.6e-21 105.9 131 46.6
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 7.7e-21 104.4 138 49.3
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.0e-20 104.0 119 47.9
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 2.9e-20 102.4 106 47.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 2.9e-20 102.4 104 55.8
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 5.0e-20 101.7 118 45.8
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.2e-19 98.6 127 45.7
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 5.5e-19 98.2 131 42.7
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.6e-18 96.7 123 45.5
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 2.1e-18 96.3 84 52.4
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.1e-18 96.3 97 48.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.1e-18 94.7 65 72.3
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 8.0e-18 94.4 97 51.5
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.3e-17 92.8 71 63.4
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 6.7e-17 91.3 99 48.5
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.6e-16 89.4 65 72.3
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 7.4e-16 87.8 108 46.3
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 2.8e-15 85.9 78 53.8
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.4e-14 83.6 86 52.3
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 5.5e-11 71.6 87 49.4
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.6e-10 70.1 103 34.0
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 2.7e-10 69.3 89 50.6
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.4e-09 67.0 91 36.3
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.3e-07 60.5 103 32.0
A10p32810 Brassica napus HOM05D000156 ORTHO05D001430 1.4e-06 57.0 70 55.7


User provided reference genes

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