Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13061 Brassica carinata HOM05D009123 ORTHO05D011699 4.5e-80 301.2 153 100.0
C02p00340 Brassica napus HOM05D009123 ORTHO05D011699 4.5e-80 301.2 153 100.0
BolC2t06034H Brassica oleracea HOM05D009123 ORTHO05D011699 6.5e-79 297.4 153 98.7
BraA02t04707Z Brassica rapa HOM05D009123 ORTHO05D011699 9.7e-75 283.5 154 94.8
BcaB05g21892 Brassica carinata HOM05D009123 ORTHO05D011699 7.0e-65 250.8 161 82.6
Thhalv10014916m.g Eutrema salsugineum HOM05D009123 ORTHO05D011699 5.3e-57 224.6 154 74.7
Sp6g40410 Schrenkiella parvula HOM05D009123 ORTHO05D011699 1.2e-35 153.7 161 57.1
A08p14150 Brassica napus HOM05D009123 ORTHO05D011699 4.4e-35 151.8 177 50.8
BcaB04g18529 Brassica carinata HOM05D009123 ORTHO05D011699 1.4e-33 146.7 177 50.3
C03p81730 Brassica napus HOM05D009123 ORTHO05D011699 1.8e-33 146.4 177 50.8
BolC3t20444H Brassica oleracea HOM05D009123 ORTHO05D011699 1.8e-33 146.4 177 50.8
BcaC01g00598 Brassica carinata HOM05D009123 ORTHO05D011699 1.6e-32 143.3 177 49.7
BraA08t33409Z Brassica rapa HOM05D009123 ORTHO05D011699 9.5e-30 134.0 151 50.3
BcaB02g10130 Brassica carinata HOM05D009123 ORTHO05D011699 3.6e-29 132.1 154 48.1
A07p18490 Brassica napus HOM05D009123 ORTHO05D011699 2.6e-27 125.9 154 48.1
BraA07t29565Z Brassica rapa HOM05D009123 ORTHO05D011699 2.6e-27 125.9 154 48.1
BcaC02g10927 Brassica carinata HOM05D009123 ORTHO05D011699 5.8e-27 124.8 154 46.8
C04p23580 Brassica napus HOM05D009123 ORTHO05D011699 5.8e-27 124.8 154 46.8
A03p67140 Brassica napus HOM05D009123 ORTHO05D011699 3.5e-24 115.5 154 44.8
CARHR119510 Cardamine hirsuta HOM05D009123 ORTHO05D011699 3.3e-22 109.0 166 47.0
BolC4t24290H Brassica oleracea HOM05D009123 ORTHO05D011699 1.2e-21 107.1 144 42.4
Carub.0004s0766 Capsella rubella HOM05D009123 ORTHO05D011699 3.4e-19 99.0 170 43.5
AT2G26370 Arabidopsis thaliana HOM05D009123 ORTHO05D038737 1.3e-18 97.1 175 42.3
Carub.0003s2749 Capsella rubella HOM05D009123 ORTHO05D038737 2.4e-17 92.8 178 42.1
AT5G23820 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 4.1e-17 92.0 165 40.6
AT5G23840 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 4.1e-17 92.0 156 38.5
BraA01t02761Z Brassica rapa HOM05D009123 ORTHO05D011699 5.4e-17 91.7 98 50.0
AL6G35100 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 1.2e-16 90.5 164 37.8
C04p27520 Brassica napus HOM05D009123 ORTHO05D011699 5.1e-15 85.1 88 47.7
AT5G23830 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 2.3e-12 76.3 166 36.7
C03p20560 Brassica napus HOM05D025788 ORTHO05D019748 2.3e-12 76.3 149 36.9
BcaC02g07810 Brassica carinata HOM05D030909 ORTHO05D027123 8.9e-12 74.3 139 41.0
AT1G45015 Arabidopsis thaliana HOM05D009123 ORTHO05D019748 1.3e-10 70.5 159 35.8
BcaB06g28710 Brassica carinata HOM05D030909 ORTHO05D027123 2.4e-09 66.2 81 53.1
AL6G35080 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 5.4e-09 65.1 75 48.0
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 2.7e-08 62.8 136 39.0
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 4.6e-08 62.0 159 35.2
Thhalv10003282m.g Eutrema salsugineum HOM05D009123 ORTHO05D019748 1.0e-07 60.8 163 31.9
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 3.9e-07 58.9 135 37.0
BolC3t14436H Brassica oleracea HOM05D025788 ORTHO05D019748 5.1e-07 58.5 111 36.0
BolC3t14467H Brassica oleracea HOM05D025788 ORTHO05D019748 5.1e-07 58.5 111 36.0
Thhalv10029005m.g Eutrema salsugineum HOM05D009123 ORTHO05D195657 5.1e-07 58.5 167 35.3
Sp2g30780 Schrenkiella parvula HOM05D009123 ORTHO05D019748 8.6e-07 57.8 155 34.2
BcaC01g02081 Brassica carinata HOM05D002139 ORTHO05D002264 4.3e-06 55.5 135 36.3
C03p68780 Brassica napus HOM05D002139 ORTHO05D002264 4.3e-06 55.5 135 36.3
BolC3t19132H Brassica oleracea HOM05D002139 ORTHO05D002264 4.3e-06 55.5 135 36.3
THA.LOC104810941 Tarenaya hassleriana HOM05D002139 ORTHO05D002264 4.3e-06 55.5 147 31.3
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 5.6e-06 55.1 159 35.2


User provided reference genes

Program Settings