Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p53160 Brassica napus HOM05D007888 ORTHO05D009976 2.7e-45 184.9 89 100.0
BcaC09g48217 Brassica carinata HOM05D007888 ORTHO05D009976 2.6e-43 178.3 87 96.6
BolC1t05261H Brassica oleracea HOM05D007888 ORTHO05D009976 2.6e-43 178.3 87 96.6
BolC1t05244H Brassica oleracea HOM05D007888 ORTHO05D009976 2.6e-32 141.7 89 78.7
C01p53000 Brassica napus HOM05D007888 ORTHO05D009976 1.3e-31 139.4 89 77.5
BolC1t05220H Brassica oleracea HOM05D007888 ORTHO05D009976 3.8e-31 137.9 89 76.4
C01p52830 Brassica napus HOM05D007888 ORTHO05D009976 5.0e-31 137.5 82 79.3
C01p52810 Brassica napus HOM05D007888 ORTHO05D009976 6.5e-31 137.1 82 79.3
C01p52800 Brassica napus HOM05D007888 ORTHO05D009976 1.1e-30 136.3 89 75.3
BolC1t05218H Brassica oleracea HOM05D007888 ORTHO05D009976 1.1e-30 136.3 89 75.3
C01p52840 Brassica napus HOM05D007888 ORTHO05D009976 1.5e-30 136.0 89 75.3
C01p52850 Brassica napus HOM05D007888 ORTHO05D009976 1.9e-30 135.6 82 78.0
C01p52860 Brassica napus HOM05D007888 ORTHO05D009976 1.9e-30 135.6 82 78.0
BolC1t05223H Brassica oleracea HOM05D007888 ORTHO05D009976 1.9e-30 135.6 82 78.0
BcaC09g48237 Brassica carinata HOM05D007888 ORTHO05D009976 3.2e-30 134.8 82 78.0
C01p52820 Brassica napus HOM05D007888 ORTHO05D009976 3.2e-30 134.8 89 75.3
BolC1t05219H Brassica oleracea HOM05D007888 ORTHO05D009976 3.2e-30 134.8 89 75.3
BolC1t05221H Brassica oleracea HOM05D007888 ORTHO05D009976 7.2e-30 133.7 81 77.8
BolC1t05222H Brassica oleracea HOM05D007888 ORTHO05D009976 9.4e-30 133.3 82 76.8
BcaC09g48239 Brassica carinata HOM05D007888 ORTHO05D009976 2.1e-29 132.1 78 79.5
BcaC09g48240 Brassica carinata HOM05D007888 ORTHO05D009976 2.1e-29 132.1 82 76.8
BcaC01g00727 Brassica carinata HOM05D007888 ORTHO05D009976 7.5e-27 123.6 81 72.8
BolC1t05230H Brassica oleracea HOM05D007888 ORTHO05D009976 2.8e-26 121.7 83 73.5
BcaB04g21088 Brassica carinata HOM05D007888 ORTHO05D009976 3.7e-26 121.3 84 70.2
BcaB04g21393 Brassica carinata HOM05D007888 ORTHO05D009976 1.4e-25 119.4 78 71.8
BcaC09g48238 Brassica carinata HOM05D007888 ORTHO05D009976 1.4e-25 119.4 82 74.4
C01p53020 Brassica napus HOM05D007888 ORTHO05D009976 2.4e-25 118.6 89 65.2
BcaC07g40200 Brassica carinata HOM05D007888 ORTHO05D009976 7.0e-25 117.1 83 69.9
Sp2g20590 Schrenkiella parvula HOM05D007888 ORTHO05D009976 9.1e-25 116.7 78 70.5
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 2.7e-24 115.2 77 74.0
BcaC09g48231 Brassica carinata HOM05D007888 ORTHO05D009976 2.2e-23 112.1 72 75.0
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 2.9e-23 111.7 77 71.4
C01p53150 Brassica napus HOM05D007888 ORTHO05D009976 1.9e-22 109.0 58 86.2
C01p52970 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-21 106.3 67 74.6
C01p52960 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-21 105.9 67 74.6
BolC1t05234H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-21 105.9 67 74.6
BolC1t05235H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-21 105.9 67 74.6
BolC1t05237H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-21 105.9 67 74.6
BolC1t05233H Brassica oleracea HOM05D007888 ORTHO05D009976 4.7e-21 104.4 67 71.6
Thhalv10005636m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 6.1e-21 104.0 81 61.7
BolC1t05231H Brassica oleracea HOM05D007888 ORTHO05D009976 8.0e-21 103.6 73 68.5
BolC1t05232H Brassica oleracea HOM05D007888 ORTHO05D009976 1.4e-20 102.8 67 71.6
C01p52940 Brassica napus HOM05D007888 ORTHO05D009976 1.8e-20 102.4 67 73.1
C01p52790 Brassica napus HOM05D007888 ORTHO05D009976 4.0e-20 101.3 63 76.2
BolC1t05236H Brassica oleracea HOM05D007888 ORTHO05D009976 5.2e-20 100.9 67 71.6
BolC1t05217H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-18 95.9 63 73.0
BcaB03g11708 Brassica carinata HOM05D007888 ORTHO05D009976 2.4e-17 92.0 81 59.3
AT3G30247 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.2e-16 89.7 73 53.4
Sp4g04720 Schrenkiella parvula HOM05D007888 ORTHO05D009976 2.0e-16 89.0 78 52.6
AT2G21655 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 4.5e-16 87.8 67 53.7
Thhalv10000516m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 4.5e-16 87.8 76 55.3
Sp4g04740 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.0e-15 86.7 78 52.6
AL4G16900 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.3e-15 86.3 80 50.0
AT3G29797 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.3e-15 86.3 73 50.7
AL4G10980 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.5e-14 82.8 73 49.3
AL4G10990 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.5e-14 82.8 73 50.7
C01p52920 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-13 79.7 49 77.6
C01p52930 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-13 79.7 49 77.6
C01p52950 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-13 79.7 49 77.6
AT2G21727 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.8e-13 78.6 71 49.3
AT2G25482 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.8e-13 78.6 76 44.7
CARHR112790 Cardamine hirsuta HOM05D007888 ORTHO05D009976 1.8e-12 75.9 75 42.7
Carub.0006s2294 Capsella rubella HOM05D007888 ORTHO05D009976 2.3e-12 75.5 71 45.1
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 3.0e-12 75.1 71 40.8
AL3G11060 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 5.2e-12 74.3 70 50.0
Carub.0004s0516 Capsella rubella HOM05D007888 ORTHO05D009976 6.8e-12 73.9 75 40.0
Carub.0004s0517 Capsella rubella HOM05D007888 ORTHO05D009976 6.8e-12 73.9 71 40.8
AT3G01185 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.2e-11 73.2 73 49.3
BcaB07g29934 Brassica carinata HOM05D007888 ORTHO05D009976 1.5e-11 72.8 75 42.7
CARHR112800 Cardamine hirsuta HOM05D007888 ORTHO05D009976 1.5e-11 72.8 64 46.9
Carub.0003s0096 Capsella rubella HOM05D007888 ORTHO05D009976 2.0e-11 72.4 70 45.7
Thhalv10005295m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 4.9e-10 67.8 52 53.8
BcaC03g17926 Brassica carinata HOM05D007888 ORTHO05D009976 1.1e-09 66.6 75 45.3
C02p59850 Brassica napus HOM05D007888 ORTHO05D009976 1.1e-09 66.6 75 45.3
BolC2t12043H Brassica oleracea HOM05D007888 ORTHO05D009976 1.1e-09 66.6 75 45.3
A02p39970 Brassica napus HOM05D007888 ORTHO05D009976 2.4e-09 65.5 75 44.0
BraA02t08959Z Brassica rapa HOM05D007888 ORTHO05D009976 2.4e-09 65.5 75 44.0
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.0e-08 62.4 64 39.1
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 6.6e-07 57.4 81 30.9
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 8.6e-07 57.0 78 30.8
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 1.1e-06 56.6 76 34.2
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.9e-06 55.8 78 30.8
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 4.3e-06 54.7 80 27.5
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 9.5e-06 53.5 78 30.8
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 9.5e-06 53.5 77 31.2


User provided reference genes

Program Settings