Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p52920 Brassica napus HOM05D007888 ORTHO05D009976 5.7e-32 140.2 66 100.0
C01p52930 Brassica napus HOM05D007888 ORTHO05D009976 5.7e-32 140.2 66 100.0
C01p52950 Brassica napus HOM05D007888 ORTHO05D009976 5.7e-32 140.2 66 100.0
C01p52940 Brassica napus HOM05D007888 ORTHO05D009976 1.3e-28 129.0 84 78.6
C01p52960 Brassica napus HOM05D007888 ORTHO05D009976 1.3e-28 129.0 84 78.6
BolC1t05234H Brassica oleracea HOM05D007888 ORTHO05D009976 1.3e-28 129.0 84 78.6
BolC1t05235H Brassica oleracea HOM05D007888 ORTHO05D009976 1.3e-28 129.0 84 78.6
BolC1t05237H Brassica oleracea HOM05D007888 ORTHO05D009976 1.3e-28 129.0 84 78.6
BolC1t05233H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-28 128.6 84 77.4
C01p52970 Brassica napus HOM05D007888 ORTHO05D009976 2.2e-28 128.3 84 77.4
BolC1t05232H Brassica oleracea HOM05D007888 ORTHO05D009976 6.5e-28 126.7 84 76.2
BolC1t05236H Brassica oleracea HOM05D007888 ORTHO05D009976 7.2e-27 123.2 84 75.0
BolC1t05231H Brassica oleracea HOM05D007888 ORTHO05D009976 5.2e-25 117.1 81 71.6
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 2.0e-24 115.2 83 68.7
BolC1t05230H Brassica oleracea HOM05D007888 ORTHO05D009976 2.0e-24 115.2 82 70.7
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 2.0e-24 115.2 83 68.7
BcaC09g48231 Brassica carinata HOM05D007888 ORTHO05D009976 1.5e-19 99.0 82 61.0
BcaB03g11708 Brassica carinata HOM05D007888 ORTHO05D009976 2.0e-16 88.6 68 63.2
BcaB04g21393 Brassica carinata HOM05D007888 ORTHO05D009976 3.4e-16 87.8 82 57.3
C01p52840 Brassica napus HOM05D007888 ORTHO05D009976 5.7e-16 87.0 82 53.7
BolC1t05220H Brassica oleracea HOM05D007888 ORTHO05D009976 5.7e-16 87.0 82 53.7
BolC1t05221H Brassica oleracea HOM05D007888 ORTHO05D009976 5.7e-16 87.0 82 53.7
C01p52800 Brassica napus HOM05D007888 ORTHO05D009976 7.5e-16 86.7 82 53.7
BolC1t05218H Brassica oleracea HOM05D007888 ORTHO05D009976 7.5e-16 86.7 82 53.7
C01p52810 Brassica napus HOM05D007888 ORTHO05D009976 9.8e-16 86.3 82 53.7
BcaB04g21088 Brassica carinata HOM05D007888 ORTHO05D009976 1.3e-15 85.9 80 55.0
C01p52820 Brassica napus HOM05D007888 ORTHO05D009976 1.3e-15 85.9 83 53.0
BolC1t05219H Brassica oleracea HOM05D007888 ORTHO05D009976 1.3e-15 85.9 83 53.0
BcaC01g00727 Brassica carinata HOM05D007888 ORTHO05D009976 1.7e-15 85.5 82 53.7
BcaC09g48239 Brassica carinata HOM05D007888 ORTHO05D009976 1.7e-15 85.5 82 52.4
C01p52850 Brassica napus HOM05D007888 ORTHO05D009976 2.8e-15 84.7 82 52.4
C01p52860 Brassica napus HOM05D007888 ORTHO05D009976 2.8e-15 84.7 82 52.4
BolC1t05222H Brassica oleracea HOM05D007888 ORTHO05D009976 2.8e-15 84.7 82 52.4
BolC1t05223H Brassica oleracea HOM05D007888 ORTHO05D009976 2.8e-15 84.7 82 52.4
C01p52830 Brassica napus HOM05D007888 ORTHO05D009976 3.7e-15 84.3 82 52.4
BcaC07g40200 Brassica carinata HOM05D007888 ORTHO05D009976 4.9e-15 84.0 80 52.5
BcaC09g48238 Brassica carinata HOM05D007888 ORTHO05D009976 1.1e-14 82.8 81 51.9
BcaC09g48217 Brassica carinata HOM05D007888 ORTHO05D009976 1.4e-14 82.4 49 77.6
BcaC09g48237 Brassica carinata HOM05D007888 ORTHO05D009976 1.4e-14 82.4 82 51.2
C01p53160 Brassica napus HOM05D007888 ORTHO05D009976 1.4e-14 82.4 49 77.6
BolC1t05261H Brassica oleracea HOM05D007888 ORTHO05D009976 1.4e-14 82.4 49 77.6
BolC1t05244H Brassica oleracea HOM05D007888 ORTHO05D009976 5.4e-14 80.5 82 51.2
BcaC09g48240 Brassica carinata HOM05D007888 ORTHO05D009976 1.2e-13 79.3 82 50.0
C01p53000 Brassica napus HOM05D007888 ORTHO05D009976 4.5e-13 77.4 82 50.0
Thhalv10005636m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 7.8e-13 76.6 62 56.5
Sp2g20590 Schrenkiella parvula HOM05D007888 ORTHO05D009976 7.8e-13 76.6 61 55.7
C01p53020 Brassica napus HOM05D007888 ORTHO05D009976 1.0e-12 76.3 82 43.9
Thhalv10000516m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 3.6e-10 67.8 48 64.6
AL4G16900 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 6.1e-10 67.0 47 61.7
Sp4g04720 Schrenkiella parvula HOM05D007888 ORTHO05D009976 4.0e-09 64.3 48 56.2
AT2G21655 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 6.8e-09 63.5 48 56.2
AT3G29797 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.5e-08 62.4 48 56.2
Sp4g04740 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.5e-08 62.4 81 40.7
AT3G30247 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 3.4e-08 61.2 48 56.2
C01p52790 Brassica napus HOM05D007888 ORTHO05D009976 3.4e-08 61.2 74 44.6
BolC1t05217H Brassica oleracea HOM05D007888 ORTHO05D009976 3.4e-08 61.2 74 44.6
AL4G10980 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 4.4e-08 60.8 48 54.2
Thhalv10005295m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 1.3e-07 59.3 59 44.1
AT2G25482 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 4.9e-07 57.4 45 51.1
C01p53150 Brassica napus HOM05D007888 ORTHO05D009976 4.9e-07 57.4 66 47.0
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 3.2e-06 54.7 48 45.8


User provided reference genes

Program Settings