Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p52860 Brassica napus HOM05D007888 ORTHO05D009976 2.3e-90 335.5 161 100.0
C01p52840 Brassica napus HOM05D007888 ORTHO05D009976 2.8e-88 328.6 160 98.1
C01p52810 Brassica napus HOM05D007888 ORTHO05D009976 4.7e-88 327.8 161 97.5
C01p52850 Brassica napus HOM05D007888 ORTHO05D009976 6.2e-88 327.4 161 97.5
C01p52830 Brassica napus HOM05D007888 ORTHO05D009976 1.4e-87 326.2 161 96.9
BolC1t05222H Brassica oleracea HOM05D007888 ORTHO05D009976 1.4e-87 326.2 164 97.0
BolC1t05218H Brassica oleracea HOM05D007888 ORTHO05D009976 1.8e-87 325.9 160 96.9
C01p52800 Brassica napus HOM05D007888 ORTHO05D009976 2.3e-87 325.5 160 96.2
BolC1t05220H Brassica oleracea HOM05D007888 ORTHO05D009976 2.3e-87 325.5 160 96.9
BolC1t05223H Brassica oleracea HOM05D007888 ORTHO05D009976 5.2e-87 324.3 161 96.9
BolC1t05221H Brassica oleracea HOM05D007888 ORTHO05D009976 8.9e-87 323.6 160 96.9
C01p52820 Brassica napus HOM05D007888 ORTHO05D009976 1.7e-85 319.3 160 95.6
BolC1t05219H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-85 319.3 160 95.6
BcaC09g48240 Brassica carinata HOM05D007888 ORTHO05D009976 3.7e-85 318.2 161 95.0
BcaC09g48237 Brassica carinata HOM05D007888 ORTHO05D009976 1.9e-84 315.8 160 94.4
BcaC09g48239 Brassica carinata HOM05D007888 ORTHO05D009976 3.9e-82 308.1 153 96.1
BcaC09g48238 Brassica carinata HOM05D007888 ORTHO05D009976 6.0e-75 284.3 153 90.8
C01p52790 Brassica napus HOM05D007888 ORTHO05D009976 1.9e-73 279.3 141 95.0
BolC1t05217H Brassica oleracea HOM05D007888 ORTHO05D009976 8.1e-72 273.9 141 93.6
BolC1t05244H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-66 256.1 158 79.1
C01p53000 Brassica napus HOM05D007888 ORTHO05D009976 5.1e-66 254.6 158 79.1
BcaB04g21393 Brassica carinata HOM05D007888 ORTHO05D009976 1.4e-63 246.5 162 74.7
BolC1t05230H Brassica oleracea HOM05D007888 ORTHO05D009976 6.9e-63 244.2 163 74.2
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 6.4e-61 237.7 164 74.4
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 2.4e-60 235.7 163 74.2
BcaB04g21088 Brassica carinata HOM05D007888 ORTHO05D009976 3.2e-60 235.3 161 72.7
BcaC09g48217 Brassica carinata HOM05D007888 ORTHO05D009976 1.0e-58 230.3 160 71.2
BolC1t05261H Brassica oleracea HOM05D007888 ORTHO05D009976 1.0e-58 230.3 160 71.2
BcaC01g00727 Brassica carinata HOM05D007888 ORTHO05D009976 3.9e-58 228.4 157 72.6
C01p53020 Brassica napus HOM05D007888 ORTHO05D009976 1.5e-57 226.5 161 69.6
BcaC09g48231 Brassica carinata HOM05D007888 ORTHO05D009976 4.3e-57 224.9 155 72.9
BolC1t05231H Brassica oleracea HOM05D007888 ORTHO05D009976 9.6e-57 223.8 161 70.2
BolC1t05233H Brassica oleracea HOM05D007888 ORTHO05D009976 1.8e-55 219.5 150 72.0
Sp2g20590 Schrenkiella parvula HOM05D007888 ORTHO05D009976 2.4e-55 219.2 158 65.8
C01p52960 Brassica napus HOM05D007888 ORTHO05D009976 3.1e-55 218.8 150 72.0
BolC1t05234H Brassica oleracea HOM05D007888 ORTHO05D009976 3.1e-55 218.8 150 72.0
BolC1t05232H Brassica oleracea HOM05D007888 ORTHO05D009976 5.3e-55 218.0 150 72.0
BolC1t05235H Brassica oleracea HOM05D007888 ORTHO05D009976 9.0e-55 217.2 150 71.3
BolC1t05237H Brassica oleracea HOM05D007888 ORTHO05D009976 9.9e-54 213.8 150 70.7
BcaC07g40200 Brassica carinata HOM05D007888 ORTHO05D009976 2.2e-53 212.6 158 68.4
C01p52940 Brassica napus HOM05D007888 ORTHO05D009976 4.9e-53 211.5 150 70.7
BolC1t05236H Brassica oleracea HOM05D007888 ORTHO05D009976 1.2e-51 206.8 150 68.7
C01p53150 Brassica napus HOM05D007888 ORTHO05D009976 3.9e-50 201.8 134 73.1
BcaB03g11708 Brassica carinata HOM05D007888 ORTHO05D009976 3.7e-48 195.3 157 65.0
Thhalv10005636m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 1.3e-45 186.8 160 60.0
Sp4g04720 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.7e-37 159.8 154 52.6
Sp4g04740 Schrenkiella parvula HOM05D007888 ORTHO05D009976 4.2e-36 155.2 154 51.3
A06p13980 Brassica napus HOM05D007888 ORTHO05D009976 5.5e-36 154.8 112 67.0
Thhalv10000516m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 4.6e-35 151.8 152 51.3
AL4G10990 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 5.7e-33 144.8 154 46.8
AT2G21655 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 3.7e-32 142.1 154 46.8
AT3G30247 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 3.1e-31 139.0 154 46.1
AL4G10980 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 6.9e-31 137.9 154 45.5
C01p52970 Brassica napus HOM05D007888 ORTHO05D009976 2.6e-30 136.0 93 69.9
C01p53160 Brassica napus HOM05D007888 ORTHO05D009976 2.6e-30 136.0 82 78.0
AT3G29797 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 5.0e-29 131.7 154 43.5
AT2G21727 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 6.5e-29 131.3 150 45.3
AL4G16900 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.3e-26 123.6 153 41.8
Sp4g04710 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.8e-26 123.2 132 47.7
BcaB07g29934 Brassica carinata HOM05D007888 ORTHO05D009976 1.5e-25 120.2 159 39.0
Carub.0003s0096 Capsella rubella HOM05D007888 ORTHO05D009976 4.3e-25 118.6 153 43.8
BcaC03g17926 Brassica carinata HOM05D007888 ORTHO05D009976 7.4e-25 117.9 159 41.5
C02p59850 Brassica napus HOM05D007888 ORTHO05D009976 7.4e-25 117.9 159 41.5
BolC2t12043H Brassica oleracea HOM05D007888 ORTHO05D009976 7.4e-25 117.9 159 41.5
AT2G25482 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.7e-24 116.7 153 40.5
AT3G01185 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.7e-24 116.7 145 43.4
A02p39970 Brassica napus HOM05D007888 ORTHO05D009976 4.8e-24 115.2 159 40.3
BraA02t08959Z Brassica rapa HOM05D007888 ORTHO05D009976 4.8e-24 115.2 159 40.3
CARHR112800 Cardamine hirsuta HOM05D007888 ORTHO05D009976 8.2e-24 114.4 148 35.8
AL3G11060 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 3.1e-23 112.5 145 42.8
Carub.0006s2294 Capsella rubella HOM05D007888 ORTHO05D009976 1.7e-21 106.7 149 38.3
Carub.0004s0517 Capsella rubella HOM05D007888 ORTHO05D009976 5.0e-21 105.1 151 37.1
BraA06t26681Z Brassica rapa HOM05D007888 ORTHO05D009976 1.6e-19 100.1 97 55.7
Carub.0004s0516 Capsella rubella HOM05D007888 ORTHO05D009976 4.7e-19 98.6 150 36.0
Thhalv10005295m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 4.7e-19 98.6 154 37.0
Sp4g04700 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.5e-17 93.6 116 40.5
C01p52920 Brassica napus HOM05D007888 ORTHO05D009976 2.6e-14 82.8 82 52.4
C01p52930 Brassica napus HOM05D007888 ORTHO05D009976 2.6e-14 82.8 82 52.4
C01p52950 Brassica napus HOM05D007888 ORTHO05D009976 2.6e-14 82.8 82 52.4
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 2.6e-14 82.8 112 35.7
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.7e-13 80.1 142 29.6
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 6.5e-13 78.2 164 28.7
CARHR112790 Cardamine hirsuta HOM05D007888 ORTHO05D009976 2.5e-12 76.3 75 44.0
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.7e-11 72.0 143 28.7
THA.LOC104824530 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 3.0e-10 69.3 151 26.5
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 8.8e-10 67.8 164 23.2
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.1e-09 67.4 138 29.7
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.6e-09 66.2 167 28.7
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.3e-09 65.9 164 25.6
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 5.7e-09 65.1 96 28.1
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 5.7e-09 65.1 111 32.4
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.7e-08 63.5 111 26.1
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.7e-08 63.5 142 27.5
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.7e-08 63.5 98 27.6
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.2e-08 63.2 166 28.3
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.2e-08 63.2 151 27.8
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.2e-08 63.2 151 27.8
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.2e-08 63.2 125 23.2
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.8e-08 62.8 116 31.0
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 3.7e-08 62.4 149 30.2
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.7e-08 62.4 124 29.0
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.8e-08 62.0 114 29.8
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 8.2e-08 61.2 149 28.9
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 8.2e-08 61.2 167 24.6
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 1.4e-07 60.5 166 24.7
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.1e-07 59.3 147 26.5
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.1e-07 59.3 149 28.9
C07p40690 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-06 57.4 45 60.0
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 1.2e-06 57.4 145 25.5
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.6e-06 57.0 86 31.4
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.6e-06 57.0 86 31.4
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.6e-06 57.0 147 24.5
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 2.0e-06 56.6 109 22.0
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 2.0e-06 56.6 86 30.2
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.5e-06 55.8 149 27.5
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 7.7e-06 54.7 155 24.5


User provided reference genes

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