Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p52810 Brassica napus HOM05D007888 ORTHO05D009976 1.7e-90 335.9 161 100.0
C01p52860 Brassica napus HOM05D007888 ORTHO05D009976 3.6e-88 328.2 161 97.5
C01p52850 Brassica napus HOM05D007888 ORTHO05D009976 4.7e-88 327.8 161 97.5
C01p52830 Brassica napus HOM05D007888 ORTHO05D009976 1.0e-87 326.6 161 96.9
BolC1t05220H Brassica oleracea HOM05D007888 ORTHO05D009976 1.8e-87 325.9 160 96.9
BolC1t05223H Brassica oleracea HOM05D007888 ORTHO05D009976 4.0e-87 324.7 161 96.9
BolC1t05218H Brassica oleracea HOM05D007888 ORTHO05D009976 1.5e-86 322.8 160 95.6
C01p52800 Brassica napus HOM05D007888 ORTHO05D009976 2.0e-86 322.4 160 95.0
C01p52840 Brassica napus HOM05D007888 ORTHO05D009976 4.4e-86 321.2 160 95.6
C01p52820 Brassica napus HOM05D007888 ORTHO05D009976 1.3e-85 319.7 160 95.6
BolC1t05219H Brassica oleracea HOM05D007888 ORTHO05D009976 1.3e-85 319.7 160 95.6
BolC1t05222H Brassica oleracea HOM05D007888 ORTHO05D009976 2.2e-85 318.9 164 94.5
BcaC09g48240 Brassica carinata HOM05D007888 ORTHO05D009976 2.9e-85 318.5 161 95.0
BolC1t05221H Brassica oleracea HOM05D007888 ORTHO05D009976 1.4e-84 316.2 160 94.4
BcaC09g48237 Brassica carinata HOM05D007888 ORTHO05D009976 1.6e-83 312.8 160 93.1
BcaC09g48239 Brassica carinata HOM05D007888 ORTHO05D009976 3.9e-82 308.1 153 96.1
BcaC09g48238 Brassica carinata HOM05D007888 ORTHO05D009976 4.6e-75 284.6 153 90.8
C01p52790 Brassica napus HOM05D007888 ORTHO05D009976 1.9e-73 279.3 141 95.0
BolC1t05217H Brassica oleracea HOM05D007888 ORTHO05D009976 8.1e-72 273.9 141 93.6
BolC1t05244H Brassica oleracea HOM05D007888 ORTHO05D009976 1.9e-65 252.7 158 77.8
C01p53000 Brassica napus HOM05D007888 ORTHO05D009976 5.6e-65 251.1 158 77.8
BcaB04g21393 Brassica carinata HOM05D007888 ORTHO05D009976 8.1e-64 247.3 162 74.7
BolC1t05230H Brassica oleracea HOM05D007888 ORTHO05D009976 5.2e-63 244.6 163 74.2
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 1.7e-61 239.6 164 75.0
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 6.4e-61 237.7 163 74.8
BcaB04g21088 Brassica carinata HOM05D007888 ORTHO05D009976 2.4e-60 235.7 161 72.7
BcaC09g48217 Brassica carinata HOM05D007888 ORTHO05D009976 7.8e-59 230.7 160 71.2
BolC1t05261H Brassica oleracea HOM05D007888 ORTHO05D009976 7.8e-59 230.7 160 71.2
BcaC09g48231 Brassica carinata HOM05D007888 ORTHO05D009976 8.7e-58 227.3 155 73.5
BcaC01g00727 Brassica carinata HOM05D007888 ORTHO05D009976 1.1e-57 226.9 157 72.0
BolC1t05231H Brassica oleracea HOM05D007888 ORTHO05D009976 7.3e-57 224.2 161 70.2
C01p53020 Brassica napus HOM05D007888 ORTHO05D009976 1.1e-55 220.3 161 67.7
BolC1t05233H Brassica oleracea HOM05D007888 ORTHO05D009976 1.1e-55 220.3 150 72.0
C01p52960 Brassica napus HOM05D007888 ORTHO05D009976 1.8e-55 219.5 150 72.0
BolC1t05234H Brassica oleracea HOM05D007888 ORTHO05D009976 1.8e-55 219.5 150 72.0
BolC1t05232H Brassica oleracea HOM05D007888 ORTHO05D009976 3.1e-55 218.8 150 72.0
BolC1t05235H Brassica oleracea HOM05D007888 ORTHO05D009976 5.3e-55 218.0 150 71.3
BolC1t05237H Brassica oleracea HOM05D007888 ORTHO05D009976 2.0e-54 216.1 150 71.3
Sp2g20590 Schrenkiella parvula HOM05D007888 ORTHO05D009976 2.6e-54 215.7 158 64.6
C01p52940 Brassica napus HOM05D007888 ORTHO05D009976 2.9e-53 212.2 150 70.7
BcaC07g40200 Brassica carinata HOM05D007888 ORTHO05D009976 2.4e-52 209.1 158 67.1
BolC1t05236H Brassica oleracea HOM05D007888 ORTHO05D009976 2.4e-52 209.1 150 69.3
C01p53150 Brassica napus HOM05D007888 ORTHO05D009976 1.1e-49 200.3 134 72.4
BcaB03g11708 Brassica carinata HOM05D007888 ORTHO05D009976 1.4e-47 193.4 157 64.3
Thhalv10005636m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 5.8e-46 188.0 160 60.0
Sp4g04720 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.4e-36 156.8 154 51.9
Sp4g04740 Schrenkiella parvula HOM05D007888 ORTHO05D009976 4.2e-36 155.2 154 51.3
Thhalv10000516m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 6.0e-35 151.4 152 51.3
A06p13980 Brassica napus HOM05D007888 ORTHO05D009976 7.9e-35 151.0 112 65.2
AL4G10990 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.6e-32 143.3 154 46.8
AT2G21655 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.6e-32 143.3 154 47.4
AT3G30247 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 3.1e-31 139.0 154 46.1
AL4G10980 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 4.1e-31 138.7 154 46.1
C01p52970 Brassica napus HOM05D007888 ORTHO05D009976 9.0e-31 137.5 93 71.0
C01p53160 Brassica napus HOM05D007888 ORTHO05D009976 9.0e-31 137.5 82 79.3
AT2G21727 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.9e-29 132.5 150 46.0
AT3G29797 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.9e-29 132.5 154 44.2
AL4G16900 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 2.7e-27 125.9 153 43.1
BcaB07g29934 Brassica carinata HOM05D007888 ORTHO05D009976 6.7e-26 121.3 159 39.6
AT3G01185 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.5e-25 119.4 145 44.1
BcaC03g17926 Brassica carinata HOM05D007888 ORTHO05D009976 3.3e-25 119.0 159 42.1
C02p59850 Brassica napus HOM05D007888 ORTHO05D009976 3.3e-25 119.0 159 42.1
BolC2t12043H Brassica oleracea HOM05D007888 ORTHO05D009976 3.3e-25 119.0 159 42.1
Carub.0003s0096 Capsella rubella HOM05D007888 ORTHO05D009976 1.3e-24 117.1 153 43.1
A02p39970 Brassica napus HOM05D007888 ORTHO05D009976 2.2e-24 116.3 159 40.9
BraA02t08959Z Brassica rapa HOM05D007888 ORTHO05D009976 2.2e-24 116.3 159 40.9
Sp4g04710 Schrenkiella parvula HOM05D007888 ORTHO05D009976 2.2e-24 116.3 132 45.5
AL3G11060 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 3.7e-24 115.5 145 43.4
AT2G25482 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 6.3e-24 114.8 153 39.9
CARHR112800 Cardamine hirsuta HOM05D007888 ORTHO05D009976 1.4e-23 113.6 148 36.5
Carub.0006s2294 Capsella rubella HOM05D007888 ORTHO05D009976 5.0e-21 105.1 149 37.6
Carub.0004s0517 Capsella rubella HOM05D007888 ORTHO05D009976 1.4e-20 103.6 150 36.7
BraA06t26681Z Brassica rapa HOM05D007888 ORTHO05D009976 1.9e-20 103.2 97 56.7
Thhalv10005295m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 4.7e-19 98.6 154 37.0
Carub.0004s0516 Capsella rubella HOM05D007888 ORTHO05D009976 1.0e-18 97.4 150 36.0
Sp4g04700 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.3e-16 90.5 116 39.7
C01p52920 Brassica napus HOM05D007888 ORTHO05D009976 9.1e-15 84.3 82 53.7
C01p52930 Brassica napus HOM05D007888 ORTHO05D009976 9.1e-15 84.3 82 53.7
C01p52950 Brassica napus HOM05D007888 ORTHO05D009976 9.1e-15 84.3 82 53.7
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 9.1e-15 84.3 112 36.6
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.0e-13 80.9 142 30.3
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.2e-13 79.7 137 29.9
CARHR112790 Cardamine hirsuta HOM05D007888 ORTHO05D009976 1.9e-12 76.6 75 44.0
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.7e-11 72.8 143 28.7
THA.LOC104824530 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 3.0e-10 69.3 151 26.5
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 5.2e-10 68.6 142 27.5
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 5.2e-10 68.6 138 29.7
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 6.7e-10 68.2 135 28.9
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 1.5e-09 67.0 164 23.2
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.6e-09 66.2 116 33.6
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 9.7e-09 64.3 116 31.9
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.3e-08 63.9 155 25.8
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.2e-08 63.2 117 30.8
Rhsim01G0015900 Rhododendron simsii HOM05D010700 ORTHO05D012225 2.2e-08 63.2 152 25.0
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.8e-08 62.8 114 29.8
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.8e-08 62.8 151 27.8
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.8e-08 62.8 151 27.8
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 2.8e-08 62.8 96 27.1
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 2.8e-08 62.8 111 31.5
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 3.7e-08 62.4 149 30.2
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 4.8e-08 62.0 142 24.6
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 6.3e-08 61.6 124 28.2
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 8.2e-08 61.2 149 28.9
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.1e-07 60.8 118 27.1
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.8e-07 60.1 139 26.6
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 3.1e-07 59.3 124 27.4
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.1e-07 59.3 149 28.9
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.1e-07 58.9 147 25.9
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.1e-07 58.9 147 25.2
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 4.1e-07 58.9 159 23.9
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 4.1e-07 58.9 125 21.6
C07p40690 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-06 57.4 45 60.0
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 1.6e-06 57.0 166 23.5
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 1.6e-06 57.0 145 25.5
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 1.6e-06 57.0 86 30.2
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.5e-06 55.8 149 27.5
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.5e-06 55.5 155 24.5
BcaB06g25567 Brassica carinata HOM05D007923 ORTHO05D009651 5.9e-06 55.1 118 27.1
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 7.7e-06 54.7 159 25.8


User provided reference genes

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