Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p52800 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-91 339.7 164 100.0
BolC1t05218H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-91 339.3 164 99.4
BolC1t05220H Brassica oleracea HOM05D007888 ORTHO05D009976 8.7e-90 333.6 164 97.0
C01p52840 Brassica napus HOM05D007888 ORTHO05D009976 1.9e-89 332.4 164 97.0
BolC1t05221H Brassica oleracea HOM05D007888 ORTHO05D009976 9.7e-89 330.1 164 97.0
C01p52820 Brassica napus HOM05D007888 ORTHO05D009976 6.3e-88 327.4 164 95.7
BolC1t05219H Brassica oleracea HOM05D007888 ORTHO05D009976 6.3e-88 327.4 164 95.7
C01p52860 Brassica napus HOM05D007888 ORTHO05D009976 3.1e-87 325.1 160 96.2
BcaC09g48237 Brassica carinata HOM05D007888 ORTHO05D009976 2.0e-86 322.4 164 93.9
C01p52810 Brassica napus HOM05D007888 ORTHO05D009976 3.4e-86 321.6 160 95.0
C01p52850 Brassica napus HOM05D007888 ORTHO05D009976 4.5e-86 321.2 160 95.0
C01p52830 Brassica napus HOM05D007888 ORTHO05D009976 1.0e-85 320.1 160 94.4
BcaC09g48240 Brassica carinata HOM05D007888 ORTHO05D009976 2.2e-85 318.9 160 94.4
BolC1t05223H Brassica oleracea HOM05D007888 ORTHO05D009976 3.8e-85 318.2 160 94.4
BolC1t05222H Brassica oleracea HOM05D007888 ORTHO05D009976 1.9e-84 315.8 163 93.3
BcaC09g48239 Brassica carinata HOM05D007888 ORTHO05D009976 2.3e-82 308.9 153 95.4
BcaC09g48238 Brassica carinata HOM05D007888 ORTHO05D009976 5.0e-77 291.2 157 91.1
C01p52790 Brassica napus HOM05D007888 ORTHO05D009976 6.7e-74 280.8 141 94.3
BolC1t05217H Brassica oleracea HOM05D007888 ORTHO05D009976 2.8e-72 275.4 141 92.9
BolC1t05244H Brassica oleracea HOM05D007888 ORTHO05D009976 5.5e-68 261.2 165 78.2
C01p53000 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-67 259.6 165 78.2
BolC1t05230H Brassica oleracea HOM05D007888 ORTHO05D009976 9.7e-65 250.4 162 75.9
BcaB04g21393 Brassica carinata HOM05D007888 ORTHO05D009976 1.1e-63 246.9 161 73.9
BcaB04g21088 Brassica carinata HOM05D007888 ORTHO05D009976 2.7e-62 242.3 165 73.3
C01p52980 Brassica napus HOM05D007888 ORTHO05D009976 6.5e-61 237.7 163 73.6
BolC1t05238H Brassica oleracea HOM05D007888 ORTHO05D009976 2.5e-60 235.7 162 73.5
BcaC09g48217 Brassica carinata HOM05D007888 ORTHO05D009976 6.1e-59 231.1 160 70.6
BolC1t05261H Brassica oleracea HOM05D007888 ORTHO05D009976 6.1e-59 231.1 160 70.6
BcaC01g00727 Brassica carinata HOM05D007888 ORTHO05D009976 8.0e-59 230.7 157 73.2
BcaC09g48231 Brassica carinata HOM05D007888 ORTHO05D009976 8.8e-58 227.3 155 72.9
C01p53020 Brassica napus HOM05D007888 ORTHO05D009976 7.5e-57 224.2 165 67.3
BolC1t05231H Brassica oleracea HOM05D007888 ORTHO05D009976 1.7e-56 223.0 165 69.1
BolC1t05233H Brassica oleracea HOM05D007888 ORTHO05D009976 2.8e-56 222.2 150 72.0
C01p52960 Brassica napus HOM05D007888 ORTHO05D009976 4.8e-56 221.5 150 72.0
BolC1t05234H Brassica oleracea HOM05D007888 ORTHO05D009976 4.8e-56 221.5 150 72.0
BolC1t05232H Brassica oleracea HOM05D007888 ORTHO05D009976 8.3e-56 220.7 150 72.0
BolC1t05235H Brassica oleracea HOM05D007888 ORTHO05D009976 1.4e-55 219.9 150 71.3
BcaC07g40200 Brassica carinata HOM05D007888 ORTHO05D009976 2.4e-55 219.2 166 68.7
BolC1t05237H Brassica oleracea HOM05D007888 ORTHO05D009976 1.6e-54 216.5 150 70.7
Sp2g20590 Schrenkiella parvula HOM05D007888 ORTHO05D009976 2.7e-54 215.7 158 64.6
C01p52940 Brassica napus HOM05D007888 ORTHO05D009976 7.7e-54 214.2 150 70.7
BolC1t05236H Brassica oleracea HOM05D007888 ORTHO05D009976 1.9e-52 209.5 150 68.7
C01p53150 Brassica napus HOM05D007888 ORTHO05D009976 2.3e-50 202.6 134 72.4
BcaB03g11708 Brassica carinata HOM05D007888 ORTHO05D009976 7.5e-49 197.6 157 65.6
Thhalv10005636m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 7.8e-46 187.6 160 60.0
Sp4g04720 Schrenkiella parvula HOM05D007888 ORTHO05D009976 3.9e-37 158.7 154 52.6
Sp4g04740 Schrenkiella parvula HOM05D007888 ORTHO05D009976 1.6e-35 153.3 154 50.6
A06p13980 Brassica napus HOM05D007888 ORTHO05D009976 4.7e-35 151.8 112 64.3
Thhalv10000516m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 2.0e-33 146.4 152 49.3
AL4G10990 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 3.2e-31 139.0 154 44.8
C01p52970 Brassica napus HOM05D007888 ORTHO05D009976 9.2e-31 137.5 93 71.0
C01p53160 Brassica napus HOM05D007888 ORTHO05D009976 1.6e-30 136.7 89 75.3
AT2G21655 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 4.6e-30 135.2 154 44.8
AT3G30247 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 1.1e-28 130.6 154 43.5
AL4G10980 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.5e-28 130.2 154 42.9
AT3G29797 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 2.1e-27 126.3 154 42.2
AT2G21727 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 8.1e-27 124.4 150 43.3
Sp4g04710 Schrenkiella parvula HOM05D007888 ORTHO05D009976 4.0e-26 122.1 132 47.0
Carub.0003s0096 Capsella rubella HOM05D007888 ORTHO05D009976 5.2e-26 121.7 153 45.8
AT3G01185 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 6.8e-26 121.3 145 45.5
BcaB07g29934 Brassica carinata HOM05D007888 ORTHO05D009976 2.6e-25 119.4 159 39.0
AL4G16900 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 4.4e-25 118.6 153 39.9
BcaC03g17926 Brassica carinata HOM05D007888 ORTHO05D009976 7.5e-25 117.9 159 41.5
C02p59850 Brassica napus HOM05D007888 ORTHO05D009976 7.5e-25 117.9 159 41.5
BolC2t12043H Brassica oleracea HOM05D007888 ORTHO05D009976 7.5e-25 117.9 159 41.5
AL3G11060 Arabidopsis lyrata HOM05D007888 ORTHO05D009976 1.3e-24 117.1 145 44.8
A02p39970 Brassica napus HOM05D007888 ORTHO05D009976 4.9e-24 115.2 159 40.3
BraA02t08959Z Brassica rapa HOM05D007888 ORTHO05D009976 4.9e-24 115.2 159 40.3
AT2G25482 Arabidopsis thaliana HOM05D007888 ORTHO05D009976 5.4e-23 111.7 153 38.6
CARHR112800 Cardamine hirsuta HOM05D007888 ORTHO05D009976 7.1e-23 111.3 148 34.5
Carub.0006s2294 Capsella rubella HOM05D007888 ORTHO05D009976 3.0e-21 105.9 149 38.3
Carub.0004s0517 Capsella rubella HOM05D007888 ORTHO05D009976 2.5e-20 102.8 151 35.8
BraA06t26681Z Brassica rapa HOM05D007888 ORTHO05D009976 7.3e-20 101.3 97 54.6
Carub.0004s0516 Capsella rubella HOM05D007888 ORTHO05D009976 1.8e-18 96.7 150 34.7
Thhalv10005295m.g Eutrema salsugineum HOM05D007888 ORTHO05D009976 4.0e-18 95.5 154 36.4
Sp4g04700 Schrenkiella parvula HOM05D007888 ORTHO05D009976 3.4e-17 92.4 116 39.7
C01p52920 Brassica napus HOM05D007888 ORTHO05D009976 9.2e-15 84.3 82 53.7
C01p52930 Brassica napus HOM05D007888 ORTHO05D009976 9.2e-15 84.3 82 53.7
C01p52950 Brassica napus HOM05D007888 ORTHO05D009976 9.2e-15 84.3 82 53.7
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.6e-14 82.0 142 30.3
Carub.0004s0518 Capsella rubella HOM05D007888 ORTHO05D009976 1.0e-13 80.9 112 33.9
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 6.6e-13 78.2 137 29.9
CARHR112790 Cardamine hirsuta HOM05D007888 ORTHO05D009976 5.6e-12 75.1 75 44.0
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.1e-11 73.2 143 28.7
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 5.2e-10 68.6 138 31.2
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 6.9e-10 68.2 164 24.4
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.5e-09 67.0 135 29.6
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 4.4e-09 65.5 96 29.2
THA.LOC104824530 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 5.8e-09 65.1 151 25.8
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 7.6e-09 64.7 142 27.5
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 9.9e-09 64.3 155 25.2
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 1.3e-08 63.9 125 24.8
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.7e-08 63.5 163 28.8
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.7e-08 63.5 116 32.8
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.7e-08 63.5 98 28.6
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.8e-08 62.4 124 29.8
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.9e-08 62.0 114 30.7
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 6.4e-08 61.6 149 30.9
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 6.4e-08 61.6 109 32.1
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.1e-07 60.8 151 27.8
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.1e-07 60.8 151 27.8
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.4e-07 60.5 149 29.5
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.4e-07 60.5 167 24.6
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 2.4e-07 59.7 166 25.3
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 5.4e-07 58.5 139 27.3
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.4e-07 58.5 149 29.5
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 7.1e-07 58.2 124 28.2
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.2e-06 57.4 86 32.6
C07p40690 Brassica napus HOM05D007888 ORTHO05D009976 1.2e-06 57.4 45 60.0
TPR.G36159 Trifolium pratense HOM05D010700 ORTHO05D012225 1.6e-06 57.0 86 31.4
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 2.1e-06 56.6 109 22.9
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.5e-06 55.8 147 25.2
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 3.5e-06 55.8 164 28.0
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 6.0e-06 55.1 145 24.8
BraA05t22535Z Brassica rapa HOM05D007923 ORTHO05D009651 7.8e-06 54.7 153 28.8


User provided reference genes

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