Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p51480 Brassica napus HOM05D000822 ORTHO05D013508 3.1e-65 251.5 118 100.0
BolC1t05090H Brassica oleracea HOM05D000822 ORTHO05D013508 2.2e-50 202.2 218 52.3
C01p51350 Brassica napus HOM05D000822 ORTHO05D013508 2.7e-48 195.3 218 51.4
BolC1t05066H Brassica oleracea HOM05D000822 ORTHO05D013508 1.0e-47 193.4 218 50.9
A01p40020 Brassica napus HOM05D000822 ORTHO05D013508 7.3e-46 187.2 103 90.3
BraA01t04043Z Brassica rapa HOM05D000822 ORTHO05D013508 7.3e-46 187.2 103 90.3
C01p51420 Brassica napus HOM05D000822 ORTHO05D013508 2.1e-45 185.7 218 50.0
C01p51150 Brassica napus HOM05D000822 ORTHO05D013508 3.4e-43 178.3 123 75.6
BolC1t05083H Brassica oleracea HOM05D000209 ORTHO05D000129 1.2e-24 116.7 83 74.7
BcaC09g48354 Brassica carinata HOM05D000209 ORTHO05D000129 5.6e-14 81.3 72 56.9
C01p51010 Brassica napus HOM05D000209 ORTHO05D000129 5.6e-14 81.3 88 53.4
BolC1t05064H Brassica oleracea HOM05D000209 ORTHO05D000129 5.6e-14 81.3 88 53.4
Carub.0003s1313 Capsella rubella HOM05D000209 ORTHO05D000129 6.2e-13 77.8 56 64.3
A01p40000 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-11 73.6 67 58.2
C01p51270 Brassica napus HOM05D000822 ORTHO05D013508 1.5e-11 73.2 35 94.3
A01p39780 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-11 72.8 77 53.2
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 2.0e-11 72.8 77 53.2
Carub.0003s1310 Capsella rubella HOM05D000209 ORTHO05D000129 4.5e-11 71.6 56 64.3
C01p51090 Brassica napus HOM05D000822 ORTHO05D013508 5.8e-11 71.2 35 91.4
BolC1t05072H Brassica oleracea HOM05D000822 ORTHO05D013508 5.8e-11 71.2 35 91.4
BcaC09g48335 Brassica carinata HOM05D000209 ORTHO05D000129 9.9e-11 70.5 56 62.5
C01p51240 Brassica napus HOM05D000209 ORTHO05D000129 9.9e-11 70.5 56 62.5
BolC1t05079H Brassica oleracea HOM05D000209 ORTHO05D000129 9.9e-11 70.5 56 62.5
Carub.0003s1235 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-10 70.1 56 60.7
BcaC09g48331 Brassica carinata HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
BcaC09g48337 Brassica carinata HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
BcaC09g48347 Brassica carinata HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 8.4e-10 67.4 56 60.7
C01p51070 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
C01p51110 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
C01p51220 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
C01p51320 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
C01p51360 Brassica napus HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
BolC1t05068H Brassica oleracea HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
BolC1t05080H Brassica oleracea HOM05D000209 ORTHO05D000129 8.4e-10 67.4 56 60.7
BcaC09g48375 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-09 67.0 56 58.9
C01p50760 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-09 67.0 56 58.9
BolC1t05025H Brassica oleracea HOM05D000209 ORTHO05D000129 1.1e-09 67.0 56 58.9
AL3G24770 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.5e-09 64.7 104 40.4
AL3G25710 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-08 63.2 56 53.6
AT3G13680 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.6e-08 63.2 56 55.4
BcaC09g48320 Brassica carinata HOM05D000822 ORTHO05D002021 2.7e-08 62.4 33 84.8
Thhalv10024142m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-08 62.0 59 50.8
AL3G25930 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-07 60.1 56 53.6
AL4G21820 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.3e-07 60.1 87 41.4
Thhalv10000447m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.3e-07 60.1 59 49.2
BcaB06g28931 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-07 59.7 96 36.5
BcaC09g48343 Brassica carinata HOM05D000822 ORTHO05D014097 1.8e-07 59.7 33 81.8
Carub.0003s1334 Capsella rubella HOM05D000209 ORTHO05D000129 1.8e-07 59.7 56 48.2
AL3G25960 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.3e-07 59.3 60 51.7
BcaB06g28930 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-07 59.3 96 35.4
CARHR088870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-07 58.9 60 50.0
CARHR154640 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-07 58.9 77 42.9
C01p51160 Brassica napus HOM05D000822 ORTHO05D013508 6.7e-07 57.8 35 74.3
AL5G24990 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.7e-07 57.4 76 44.7
C04p65350 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-06 57.0 96 36.5
AL1G21870 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-06 56.2 86 36.0
CARHR149830 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.9e-06 56.2 88 35.2
BcaC05g26586 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-06 55.8 56 48.2
BcaC05g26592 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-06 55.8 56 48.2
A04p27850 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-06 55.8 96 35.4
C01p50770 Brassica napus HOM05D000209 ORTHO05D013508 2.5e-06 55.8 40 65.0
BolC5t31357H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-06 55.8 56 48.2
BraA04t18277Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-06 55.8 96 35.4
CARHR092560 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.5e-06 55.8 82 42.7
THA.LOC104805089 Tarenaya hassleriana HOM05D000822 ORTHO05D002021 2.5e-06 55.8 74 40.5
BcaB06g28955 Brassica carinata HOM05D000209 ORTHO05D000129 3.3e-06 55.5 85 41.2
AL1G26820 Arabidopsis lyrata HOM05D000822 ORTHO05D002021 4.3e-06 55.1 65 44.6
AL7G45360 Arabidopsis lyrata HOM05D000822 ORTHO05D002021 4.3e-06 55.1 65 44.6
C05p26320 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-06 55.1 56 48.2
AL2G18650 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.4e-06 54.3 58 53.4
AT1G14790 Arabidopsis thaliana HOM05D000822 ORTHO05D002021 7.4e-06 54.3 65 43.1
BolC4t28014H Brassica oleracea HOM05D000209 ORTHO05D000129 7.4e-06 54.3 96 35.4
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.6e-06 53.9 86 37.2
AL3G30920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.6e-06 53.9 87 40.2
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.6e-06 53.9 86 37.2
AT3G13820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 9.6e-06 53.9 60 46.7
Carub.0001s1459 Capsella rubella HOM05D000822 ORTHO05D002021 9.6e-06 53.9 65 43.1


User provided reference genes

Program Settings