Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p51380 Brassica napus HOM05D001235 ORTHO05D005684 4.3e-62 241.1 120 100.0
BolC4t22855H Brassica oleracea HOM05D001235 ORTHO05D005684 1.1e-60 236.5 120 98.3
BolC6t37532H Brassica oleracea HOM05D001235 ORTHO05D005684 5.0e-50 201.1 120 86.7
BcaB07g29956 Brassica carinata HOM05D001235 ORTHO05D005684 1.0e-42 176.8 118 75.4
Sp2g21450 Schrenkiella parvula HOM05D001235 ORTHO05D005684 1.4e-41 172.9 118 72.0
Thhalv10003634m.g Eutrema salsugineum HOM05D001235 ORTHO05D005684 1.9e-41 172.6 118 72.0
A02p39300 Brassica napus HOM05D001235 ORTHO05D005684 2.5e-41 172.2 119 73.1
C02p59020 Brassica napus HOM05D001235 ORTHO05D005684 2.5e-41 172.2 119 73.1
BraA02t08895Z Brassica rapa HOM05D001235 ORTHO05D005684 2.5e-41 172.2 119 73.1
BcaB04g19735 Brassica carinata HOM05D001235 ORTHO05D005684 4.2e-41 171.4 118 71.2
AL6G38320 Arabidopsis lyrata HOM05D001235 ORTHO05D005684 5.5e-41 171.0 118 72.9
CARHR187040 Cardamine hirsuta HOM05D001235 ORTHO05D005684 9.4e-41 170.2 120 70.0
BcaC03g17860 Brassica carinata HOM05D001235 ORTHO05D005684 1.6e-40 169.5 118 72.0
C09p06430 Brassica napus HOM05D001235 ORTHO05D005684 2.7e-40 168.7 118 70.3
BolC9t53563H Brassica oleracea HOM05D001235 ORTHO05D005684 2.7e-40 168.7 118 70.3
AT5G26570 Arabidopsis thaliana HOM05D001235 ORTHO05D005684 3.6e-40 168.3 118 71.2
BolC2t11957H Brassica oleracea HOM05D001235 ORTHO05D005684 6.1e-40 167.5 119 71.4
BcaC04g23619 Brassica carinata HOM05D001235 ORTHO05D005684 1.4e-39 166.4 118 69.5
BraA09t36226Z Brassica rapa HOM05D001235 ORTHO05D005684 1.4e-39 166.4 120 67.5
Carub.0006s2413 Capsella rubella HOM05D001235 ORTHO05D005684 3.0e-39 165.2 118 69.5
A09p05840 Brassica napus HOM05D001235 ORTHO05D005684 3.9e-39 164.9 120 68.3
BcaC04g23551 Brassica carinata HOM05D001235 ORTHO05D005684 8.8e-39 163.7 118 68.6
Aa31LG11G10130 Aethionema arabicum HOM05D001235 ORTHO05D005684 1.3e-37 159.8 113 71.7
THA.LOC104822294 Tarenaya hassleriana HOM05D001235 ORTHO05D005684 2.9e-34 148.7 118 61.9
THA.LOC104818773 Tarenaya hassleriana HOM05D001235 ORTHO05D005684 1.6e-32 142.9 111 63.1
Cpa.g.sc502.2 Carica papaya HOM05D001235 ORTHO05D005684 8.8e-31 137.1 115 60.9
Potri.002G234500 Populus trichocarpa HOM05D001235 ORTHO05D005684 2.0e-30 136.0 115 60.0
Sabra02G0178900 Salix brachista HOM05D001235 ORTHO05D005684 2.6e-30 135.6 115 60.9
Dinv13678 Davidia involucrata HOM05D001235 ORTHO05D005684 9.7e-30 133.7 117 59.8
QL06p027955 Quercus lobata HOM05D001235 ORTHO05D005684 1.7e-29 132.9 122 59.0
Dinv27164 Davidia involucrata HOM05D001235 ORTHO05D005684 4.8e-29 131.3 111 60.4
Atru.chr3.1828 Acer truncatum HOM05D001235 ORTHO05D005684 1.1e-28 130.2 117 58.1
Manes.05G194300 Manihot esculenta HOM05D001235 ORTHO05D005684 1.8e-28 129.4 115 56.5
AUR62020915 Chenopodium quinoa HOM05D001235 ORTHO05D005684 2.4e-28 129.0 118 53.4
Hma1.2p1_0349F.1_g132360 Hydrangea macrophylla HOM05D001235 ORTHO05D005684 2.4e-28 129.0 110 57.3
TWI73G0237 Tripterygium wilfordii HOM05D001235 ORTHO05D005684 3.1e-28 128.6 117 54.7
AUR62018504 Chenopodium quinoa HOM05D001235 ORTHO05D005684 4.1e-28 128.3 118 53.4
Gorai.011G147600 Gossypium raimondii HOM05D001235 ORTHO05D005684 5.3e-28 127.9 117 54.7
Sabra14G0111700 Salix brachista HOM05D001235 ORTHO05D005684 5.3e-28 127.9 115 55.7
PGR142G1880 Punica granatum HOM05D001235 ORTHO05D005684 7.0e-28 127.5 111 57.7
GSVIVG01031639001 Vitis vinifera HOM05D001235 ORTHO05D005684 9.1e-28 127.1 116 57.8
Gohir.D10G133800 Gossypium hirsutum HOM05D001235 ORTHO05D005684 1.6e-27 126.3 117 54.7
Nitab4.5_0012294g0010 Nicotiana tabacum HOM05D001235 ORTHO05D005684 1.6e-27 126.3 111 57.7
Sed0023516 Sechium edule HOM05D001235 ORTHO05D005684 1.6e-27 126.3 117 53.8
PGSC0003DMG400016613 Solanum tuberosum HOM05D001235 ORTHO05D005684 1.6e-27 126.3 117 55.6
ClCG07G015490 Citrullus lanatus HOM05D001235 ORTHO05D005684 2.0e-27 125.9 107 58.9
CAN.G681.26 Capsicum annuum HOM05D001235 ORTHO05D005684 3.5e-27 125.2 117 55.6
Gohir.A10G133100 Gossypium hirsutum HOM05D001235 ORTHO05D005684 3.5e-27 125.2 117 54.7
Sed0003584 Sechium edule HOM05D001235 ORTHO05D005684 3.5e-27 125.2 107 57.9
Potri.014G147900 Populus trichocarpa HOM05D001235 ORTHO05D005684 5.9e-27 124.4 115 53.9
RcHm_v2.0_Chr4g0411331 Rosa chinensis HOM05D001235 ORTHO05D005684 5.9e-27 124.4 118 55.9
Solyc09g098040.3 Solanum lycopersicum HOM05D001235 ORTHO05D005684 5.9e-27 124.4 117 55.6
CSS0015752 Camellia sinensis var. sinensis HOM05D001235 ORTHO05D005684 7.7e-27 124.0 104 57.7
CSS0039330 Camellia sinensis var. sinensis HOM05D001235 ORTHO05D005684 7.7e-27 124.0 104 57.7
Cfa008685 Carpinus fangiana HOM05D001235 ORTHO05D005684 7.7e-27 124.0 120 57.5
MELO3C017735.2 Cucumis melo HOM05D001235 ORTHO05D005684 7.7e-27 124.0 107 57.9
Sopen09g035960 Solanum pennellii HOM05D001235 ORTHO05D005684 7.7e-27 124.0 117 55.6
EL10Ac3g07409 Beta vulgaris HOM05D001235 ORTHO05D005684 1.0e-26 123.6 118 51.7
Duzib212G0549 Durio zibethinus HOM05D001235 ORTHO05D005684 1.0e-26 123.6 117 51.3
Glyma.10G298000 Glycine max HOM05D001235 ORTHO05D005684 1.0e-26 123.6 121 53.7
Nitab4.5_0001693g0060 Nicotiana tabacum HOM05D001235 ORTHO05D005684 1.0e-26 123.6 111 57.7
Cc03_g10000 Coffea canephora HOM05D001235 ORTHO05D005684 1.3e-26 123.2 117 54.7
CsaV3_4G003110 Cucumis sativus L. HOM05D001235 ORTHO05D005684 1.3e-26 123.2 107 57.9
FAN22G1075 Fragaria x ananassa HOM05D001235 ORTHO05D005684 1.3e-26 123.2 118 55.1
Duzib151G0601 Durio zibethinus HOM05D001235 ORTHO05D005684 2.2e-26 122.5 117 53.0
FAN07G2568 Fragaria x ananassa HOM05D001235 ORTHO05D005684 2.2e-26 122.5 118 55.1
FAN12G0235 Fragaria x ananassa HOM05D001235 ORTHO05D005684 2.2e-26 122.5 118 55.1
FAN17G0427 Fragaria x ananassa HOM05D001235 ORTHO05D005684 2.2e-26 122.5 118 55.1
DCAR_027478 Daucus carota HOM05D001235 ORTHO05D005684 2.9e-26 122.1 111 56.8
FvH4_4g12510 Fragaria vesca HOM05D001235 ORTHO05D005684 3.8e-26 121.7 118 54.2
Nn1g08260 Nelumbo nucifera HOM05D001235 ORTHO05D005684 3.8e-26 121.7 114 55.3
SalBow6G1240 Salvia bowleyana HOM05D001235 ORTHO05D005684 5.0e-26 121.3 104 58.7
Thecc.04G188100 Theobroma cacao HOM05D001235 ORTHO05D005684 5.0e-26 121.3 117 52.1
TAR362G0786 Trochodendron aralioides HOM05D001235 ORTHO05D005684 5.0e-26 121.3 121 52.9
Migut.N03329 Erythranthe guttata HOM05D001235 ORTHO05D005684 6.5e-26 120.9 110 55.5
Gohir.D09G202400 Gossypium hirsutum HOM05D001235 ORTHO05D005684 6.5e-26 120.9 117 50.4
Peaxi162Scf00286g00547 Petunia axillaris HOM05D001235 ORTHO05D005684 1.5e-25 119.8 113 52.2
Gorai.006G226300 Gossypium raimondii HOM05D001235 ORTHO05D005684 1.9e-25 119.4 117 49.6
HanXRQChr01g0021711 Helianthus annuus HOM05D001235 ORTHO05D005684 1.9e-25 119.4 104 57.7
Psat6g244000 Pisum sativum HOM05D001235 ORTHO05D005684 1.9e-25 119.4 117 52.1
Ah.04g149690 Amaranthus hybridus HOM05D001235 ORTHO05D005684 2.5e-25 119.0 118 49.2
VMungo0720G0937 Vigna mungo HOM05D001235 ORTHO05D005684 3.2e-25 118.6 118 52.5
Sc19g0007540 Simmondsia chinensis HOM05D001235 ORTHO05D005684 4.2e-25 118.2 111 51.4
Rhsim01G0114000 Rhododendron simsii HOM05D001235 ORTHO05D005684 5.5e-25 117.9 116 53.4
Oeu001997.1 Olea europaea HOM05D001235 ORTHO05D005684 7.2e-25 117.5 104 56.7
CANSAT78G1591 Cannabis sativa HOM05D001235 ORTHO05D005684 9.4e-25 117.1 115 51.3
MD04G1025900 Malus domestica HOM05D001235 ORTHO05D005684 9.4e-25 117.1 104 54.8
Lj6C311G3 Lonicera japonica HOM05D001235 ORTHO05D005684 1.2e-24 116.7 104 56.7
Hund19034 Selenicereus undatus HOM05D001235 ORTHO05D005684 1.2e-24 116.7 119 51.3
vmacro20797 Vaccinium macrocarpon HOM05D001235 ORTHO05D005684 1.2e-24 116.7 107 57.9
Aqoxy5G00036 Aquilegia oxysepala HOM05D001235 ORTHO05D005684 1.6e-24 116.3 109 56.0
Lj5g0010068 Lotus japonicus HOM05D001235 ORTHO05D005684 1.6e-24 116.3 112 52.7
Medtr1g117000 Medicago truncatula HOM05D001235 ORTHO05D005684 1.6e-24 116.3 113 51.3
Phvul.007G001400 Phaseolus vulgaris HOM05D001235 ORTHO05D005684 1.6e-24 116.3 120 52.5
SEGI_29879 Sequoiadendron giganteum HOM05D001235 ORTHO05D005684 1.6e-24 116.3 108 53.7
SGA_v2.0_scaffold28G12047 Striga asiatica HOM05D001235 ORTHO05D005684 1.6e-24 116.3 111 53.2
Lsat_1_v5_gn_1_69940 Lactuca sativa HOM05D001235 ORTHO05D005684 2.1e-24 115.9 111 53.2
Medtr6g093240 Medicago truncatula HOM05D001235 ORTHO05D005684 2.1e-24 115.9 113 51.3
RcHm_v2.0_Chr4g0411251 Rosa chinensis HOM05D001235 ORTHO05D005684 2.1e-24 115.9 118 53.4
Actinidia35919 Actinidia chinensis HOM05D001235 ORTHO05D005684 2.7e-24 115.5 117 50.4
Gohir.A09G209000 Gossypium hirsutum HOM05D001235 ORTHO05D005684 2.7e-24 115.5 117 47.9
Ca_11427_v3 Cicer arietinum L. HOM05D001235 ORTHO05D005684 6.1e-24 114.4 117 50.4
Ca_29863_v3 Cicer arietinum L. HOM05D001235 ORTHO05D005684 6.1e-24 114.4 117 50.4
SMO146G0043 Selaginella moellendorffii HOM05D001235 ORTHO05D005684 8.0e-24 114.0 115 47.0
ATR0686G153 Amborella trichopoda HOM05D001235 ORTHO05D005684 1.0e-23 113.6 114 49.1
MSTRG.22434 Avicennia marina HOM05D001235 ORTHO05D005684 1.0e-23 113.6 111 52.3
Prupe.1G175200 Prunus persica HOM05D001235 ORTHO05D005684 1.8e-23 112.8 104 53.8
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 4.0e-23 111.7 113 52.2
CiPaw.01G110000 Carya illinoinensis HOM05D001235 ORTHO05D005684 5.2e-23 111.3 107 54.2
Os12g0297500 Oryza sativa ssp. japonica HOM05D001235 ORTHO05D005684 2.0e-22 109.4 114 49.1
ECA248G1402 Erigeron canadensis HOM05D001235 ORTHO05D005684 3.3e-22 108.6 104 52.9
Mapoly0096s0069 Marchantia polymorpha HOM05D001235 ORTHO05D005684 2.2e-21 105.9 107 49.5
CDE04G0849 Ceratophyllum demersum HOM05D001235 ORTHO05D005684 2.8e-21 105.5 103 50.5
Lalb_Chr02g0144531 Lupinus albus HOM05D001235 ORTHO05D005684 2.8e-21 105.5 114 49.1
Zm00001eb409850 Zea mays HOM05D001235 ORTHO05D005684 1.1e-20 103.6 111 49.5
Haze_11704 Corylus avellana HOM05D001235 ORTHO05D005684 2.4e-20 102.4 120 50.0
Eucgr.H00494 Eucalyptus grandis HOM05D001235 ORTHO05D005684 2.4e-20 102.4 115 49.6
PSO170G5672 Papaver somniferum HOM05D001235 ORTHO05D005684 3.1e-20 102.1 104 51.0
PSO357G0146 Papaver somniferum HOM05D001235 ORTHO05D005684 3.1e-20 102.1 104 51.0
CBR_g30239 Chara braunii HOM05D001235 ORTHO05D005684 4.1e-20 101.7 107 47.7
HPP92_009959 Vanilla planifolia HOM05D001235 ORTHO05D005684 7.0e-20 100.9 104 51.9
CDE07G0946 Ceratophyllum demersum HOM05D001235 ORTHO05D005684 4.5e-19 98.2 103 49.5
Pp3c18_14870 Physcomitrium patens HOM05D001235 ORTHO05D005684 7.7e-19 97.4 117 42.7
Pp3c14_19150 Physcomitrium patens HOM05D001235 ORTHO05D005684 3.0e-15 85.5 118 42.4
Psat0s1999g0080 Pisum sativum HOM05D001235 ORTHO05D005684 5.2e-15 84.7 112 42.9
TPR.G40064 Trifolium pratense HOM05D001235 ORTHO05D005684 1.5e-06 56.6 49 49.0
Cre17.g719900 Chlamydomonas reinhardtii HOM05D001235 ORTHO05D005684 2.0e-06 56.2 107 33.6
MCO13G077 Micromonas commoda HOM05D001235 ORTHO05D005684 7.5e-06 54.3 110 27.3


User provided reference genes

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