Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48383 Brassica carinata HOM05D004436 ORTHO05D005179 2.2e-233 812.0 430 100.0
C01p50660 Brassica napus HOM05D004436 ORTHO05D005179 2.2e-233 812.0 430 100.0
BolC1t05015H Brassica oleracea HOM05D004436 ORTHO05D005179 2.2e-233 812.0 430 100.0
BraA01t04010Z Brassica rapa HOM05D004436 ORTHO05D005179 1.1e-224 783.1 428 96.5
A01p39710 Brassica napus HOM05D004436 ORTHO05D005179 1.9e-224 782.3 428 96.5
BcaB04g20967 Brassica carinata HOM05D004436 ORTHO05D005179 8.5e-177 624.0 444 79.5
Sp3g12180 Schrenkiella parvula HOM05D004436 ORTHO05D005179 4.0e-166 588.6 435 69.7
Thhalv10020760m.g Eutrema salsugineum HOM05D004436 ORTHO05D005179 1.6e-151 540.0 436 68.1
Aa31LG8G1130 Aethionema arabicum HOM05D004436 ORTHO05D005179 5.8e-133 478.4 442 59.7
AT3G13940 Arabidopsis thaliana HOM05D004436 ORTHO05D005179 5.8e-125 451.8 442 54.3
AL3G26120 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.4e-123 447.2 442 54.1
CARHR088750 Cardamine hirsuta HOM05D004436 ORTHO05D005179 1.7e-116 423.7 417 54.9
Carub.0003s1351 Capsella rubella HOM05D004436 ORTHO05D005179 7.1e-115 418.3 432 52.3
THA.LOC104804933 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 2.1e-114 416.8 402 56.2
Cpa.g.sc25.86 Carica papaya HOM05D004436 ORTHO05D005179 7.8e-106 388.3 450 49.3
TWI23G0436 Tripterygium wilfordii HOM05D004436 ORTHO05D005179 1.9e-96 357.1 389 50.9
Eucgr.F03167 Eucalyptus grandis HOM05D004436 ORTHO05D005179 3.7e-95 352.8 401 47.4
Manes.11G023100 Manihot esculenta HOM05D004436 ORTHO05D005179 1.4e-94 350.9 427 46.4
Manes.04G142200 Manihot esculenta HOM05D004436 ORTHO05D005179 2.9e-92 343.2 430 46.3
CiPaw.01G221800 Carya illinoinensis HOM05D004436 ORTHO05D005179 5.5e-91 339.0 399 45.6
Duzib205G0267 Durio zibethinus HOM05D004436 ORTHO05D005179 9.3e-91 338.2 413 47.7
CiPaw.05G181900 Carya illinoinensis HOM05D004436 ORTHO05D005179 2.7e-90 336.7 399 45.1
PGR119G1065 Punica granatum HOM05D004436 ORTHO05D005179 1.3e-89 334.3 391 46.5
Thecc.03G227200 Theobroma cacao HOM05D004436 ORTHO05D005179 2.3e-89 333.6 422 46.2
CsaV3_7G034640 Cucumis sativus L. HOM05D004436 ORTHO05D005179 1.1e-88 331.3 397 45.8
MELO3C024372.2 Cucumis melo HOM05D004436 ORTHO05D005179 2.5e-88 330.1 397 45.8
Lsat_1_v5_gn_5_135221 Lactuca sativa HOM05D004436 ORTHO05D005179 3.3e-88 329.7 394 46.2
Gohir.D03G171700 Gossypium hirsutum HOM05D004436 ORTHO05D005179 7.4e-88 328.6 411 47.2
ClCG09G000840 Citrullus lanatus HOM05D004436 ORTHO05D005179 9.6e-88 328.2 400 45.0
Gorai.003G182300 Gossypium raimondii HOM05D004436 ORTHO05D005179 2.8e-87 326.6 411 47.2
Lj6g0016044 Lotus japonicus HOM05D004436 ORTHO05D005179 3.7e-87 326.2 403 44.9
CSS0015890 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 1.1e-86 324.7 387 45.0
Ciclev10025597m.g Citrus clementina HOM05D004436 ORTHO05D005179 1.1e-86 324.7 391 45.5
HanXRQChr10g0312341 Helianthus annuus HOM05D004436 ORTHO05D005179 4.0e-86 322.8 394 46.7
Oeu044709.1 Olea europaea HOM05D004436 ORTHO05D005179 9.0e-86 321.6 401 46.4
Actinidia32167 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.5e-85 320.9 407 43.0
Hma1.2p1_0496F.1_g166100 Hydrangea macrophylla HOM05D004436 ORTHO05D005179 1.5e-85 320.9 412 44.2
Gohir.A03G000500 Gossypium hirsutum HOM05D004436 ORTHO05D005179 2.6e-85 320.1 411 46.7
Potri.001G198600 Populus trichocarpa HOM05D004436 ORTHO05D005179 4.5e-85 319.3 423 44.4
Sed0020704 Sechium edule HOM05D004436 ORTHO05D005179 7.6e-85 318.5 389 44.7
TAR375G0086 Trochodendron aralioides HOM05D004436 ORTHO05D005179 1.0e-84 318.2 401 42.1
MD09G1187900 Malus domestica HOM05D004436 ORTHO05D005179 2.2e-84 317.0 395 46.1
GSVIVG01016817001 Vitis vinifera HOM05D004436 ORTHO05D005179 5.0e-84 315.8 389 46.3
Oeu047041.1 Olea europaea HOM05D004436 ORTHO05D005179 8.4e-84 315.1 385 47.5
COL.COLO4_30482 Corchorus olitorius HOM05D004436 ORTHO05D005179 2.5e-83 313.5 412 45.6
Dinv03512 Davidia involucrata HOM05D004436 ORTHO05D005179 2.5e-83 313.5 401 42.6
Medtr7g104810 Medicago truncatula HOM05D004436 ORTHO05D005179 2.5e-83 313.5 401 44.1
Rhsim08G0236100 Rhododendron simsii HOM05D004436 ORTHO05D005179 2.5e-83 313.5 392 43.6
ECA234G4408 Erigeron canadensis HOM05D004436 ORTHO05D005179 4.2e-83 312.8 384 46.1
Sopen06g018390 Solanum pennellii HOM05D004436 ORTHO05D005179 5.5e-83 312.4 393 45.3
Sed0007780 Sechium edule HOM05D004436 ORTHO05D005179 7.1e-83 312.0 401 43.6
vmacro22224 Vaccinium macrocarpon HOM05D004436 ORTHO05D005179 7.1e-83 312.0 397 44.3
Prupe.3G044800 Prunus persica HOM05D004436 ORTHO05D005179 1.2e-82 311.2 397 43.1
Solyc06g053330.4 Solanum lycopersicum HOM05D004436 ORTHO05D005179 2.7e-82 310.1 393 44.8
Glyma.15G165300 Glycine max HOM05D004436 ORTHO05D005179 3.5e-82 309.7 383 46.2
Ca_02096_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 4.6e-82 309.3 389 44.5
Atru.chr1.3808 Acer truncatum HOM05D004436 ORTHO05D005179 1.0e-81 308.1 422 42.2
CSS0033207 Camellia sinensis var. sinensis HOM05D004436 ORTHO05D005179 1.3e-81 307.8 387 43.4
arahy.Tifrunner.gnm1.ann1.4RDH3B Arachis hypogaea HOM05D004436 ORTHO05D005179 2.3e-81 307.0 391 42.5
arahy.Tifrunner.gnm1.ann1.0TY6IG Arachis hypogaea HOM05D004436 ORTHO05D005179 5.1e-81 305.8 391 42.5
Hund20819 Selenicereus undatus HOM05D004436 ORTHO05D005179 1.1e-80 304.7 392 42.6
PGSC0003DMG400016304 Solanum tuberosum HOM05D004436 ORTHO05D005179 1.1e-80 304.7 393 44.0
DCAR_026403 Daucus carota HOM05D004436 ORTHO05D005179 4.3e-80 302.8 398 43.7
Medtr2g037880 Medicago truncatula HOM05D004436 ORTHO05D005179 4.3e-80 302.8 391 43.7
RcHm_v2.0_Chr2g0144531 Rosa chinensis HOM05D004436 ORTHO05D005179 4.3e-80 302.8 399 43.6
Lj5A40G74 Lonicera japonica HOM05D004436 ORTHO05D005179 1.6e-79 300.8 396 43.2
FAN02G3564 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.7e-79 299.7 402 43.0
FAN09G2135 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.7e-79 299.7 402 43.3
Psat1g144000 Pisum sativum HOM05D004436 ORTHO05D005179 6.3e-79 298.9 395 44.3
Sabra01G0155800 Salix brachista HOM05D004436 ORTHO05D005179 1.4e-78 297.7 435 40.2
Sc12g0010440 Simmondsia chinensis HOM05D004436 ORTHO05D005179 1.4e-78 297.7 396 43.7
Dinv30366 Davidia involucrata HOM05D004436 ORTHO05D005179 1.8e-78 297.4 356 44.9
CAN.G540.4 Capsicum annuum HOM05D004436 ORTHO05D005179 2.4e-78 297.0 394 42.4
Lalb_Chr08g0233321 Lupinus albus HOM05D004436 ORTHO05D005179 2.4e-78 297.0 389 44.2
FAN05G5343 Fragaria x ananassa HOM05D004436 ORTHO05D005179 4.1e-78 296.2 406 42.6
CANSAT56G1493 Cannabis sativa HOM05D004436 ORTHO05D005179 5.3e-78 295.8 380 41.6
COL.COLO4_17027 Corchorus olitorius HOM05D004436 ORTHO05D005179 5.3e-78 295.8 350 48.9
FvH4_6g34180 Fragaria vesca HOM05D004436 ORTHO05D005179 5.3e-78 295.8 402 42.8
Medtr2g037460 Medicago truncatula HOM05D004436 ORTHO05D005179 2.0e-77 293.9 393 43.8
Nitab4.5_0000035g0090 Nicotiana tabacum HOM05D004436 ORTHO05D005179 5.9e-77 292.4 391 41.9
TPR.G13789 Trifolium pratense HOM05D004436 ORTHO05D005179 1.7e-76 290.8 397 43.8
Phvul.009G236700 Phaseolus vulgaris HOM05D004436 ORTHO05D005179 2.9e-76 290.0 388 45.4
MSTRG.22562 Avicennia marina HOM05D004436 ORTHO05D005179 8.5e-76 288.5 404 41.8
Haze_15997 Corylus avellana HOM05D004436 ORTHO05D005179 1.4e-75 287.7 431 39.4
Peaxi162Scf00943g00014 Petunia axillaris HOM05D004436 ORTHO05D005179 1.6e-74 284.3 398 40.2
Peaxi162Scf00647g00219 Petunia axillaris HOM05D004436 ORTHO05D005179 2.7e-74 283.5 391 41.4
Migut.D00948 Erythranthe guttata HOM05D004436 ORTHO05D005179 3.6e-74 283.1 410 41.2
FAN14G2695 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.6e-74 283.1 438 39.7
FAN26G0630 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.6e-74 283.1 392 42.6
Aqoxy2G00706 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.8e-73 280.8 397 41.1
AUR62009860 Chenopodium quinoa HOM05D004436 ORTHO05D005179 2.3e-73 280.4 390 40.5
SGA_v2.0_scaffold68G22895 Striga asiatica HOM05D004436 ORTHO05D005179 3.0e-73 280.0 390 43.1
Nitab4.5_0012713g0010 Nicotiana tabacum HOM05D004436 ORTHO05D005179 4.3e-72 276.2 389 41.1
RcHm_v2.0_Chr2g0166351 Rosa chinensis HOM05D004436 ORTHO05D005179 5.7e-72 275.8 393 42.7
CDE07G0038 Ceratophyllum demersum HOM05D004436 ORTHO05D005179 9.7e-72 275.0 421 39.2
EL10Ac7g16380 Beta vulgaris HOM05D004436 ORTHO05D005179 1.7e-71 274.2 385 42.3
EL10Ac7g16378 Beta vulgaris HOM05D004436 ORTHO05D005179 2.8e-71 273.5 387 42.1
Cc04_g01610 Coffea canephora HOM05D004436 ORTHO05D005179 2.4e-70 270.4 315 46.3
FvH4_6g47280 Fragaria vesca HOM05D004436 ORTHO05D005179 1.5e-69 267.7 412 41.0
AUR62001510 Chenopodium quinoa HOM05D004436 ORTHO05D005179 2.2e-68 263.8 416 38.0
Ah.07g197300 Amaranthus hybridus HOM05D004436 ORTHO05D005179 8.5e-68 261.9 394 39.1
Rhsim10G0150900 Rhododendron simsii HOM05D004436 ORTHO05D005179 1.2e-66 258.1 471 35.5
PSO724G1089 Papaver somniferum HOM05D004436 ORTHO05D005179 2.3e-65 253.8 398 38.4
PSO135G0558 Papaver somniferum HOM05D004436 ORTHO05D005179 5.1e-65 252.7 401 37.9
QL05p009436 Quercus lobata HOM05D004436 ORTHO05D005179 3.1e-62 243.4 606 29.5
Carub.0003s3547 Capsella rubella HOM05D004436 ORTHO05D005179 1.2e-61 241.5 357 42.0
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 3.5e-61 240.0 403 37.2
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 1.5e-59 234.6 406 37.9
FAN24G2018 Fragaria x ananassa HOM05D004436 ORTHO05D005179 8.0e-58 228.8 380 38.7
HPP92_009424 Vanilla planifolia HOM05D004436 ORTHO05D005179 1.1e-56 224.9 399 38.6
Peaxi162Scf00060g02815 Petunia axillaris HOM05D004436 ORTHO05D005179 1.1e-54 218.4 395 35.7
Lj6g0018808 Lotus japonicus HOM05D004436 ORTHO05D005179 1.8e-54 217.6 247 46.6
Nn6g35749 Nelumbo nucifera HOM05D004436 ORTHO05D005179 3.1e-54 216.9 393 35.9
Nitab4.5_0004287g0020 Nicotiana tabacum HOM05D004436 ORTHO05D005179 4.5e-53 213.0 383 36.3
MD17G1172300 Malus domestica HOM05D004436 ORTHO05D005179 7.7e-53 212.2 310 41.3
TPR.G16505 Trifolium pratense HOM05D004436 ORTHO05D005179 2.2e-52 210.7 222 47.3
FvH4_2g14600 Fragaria vesca HOM05D004436 ORTHO05D005179 1.1e-51 208.4 300 42.7
THA.LOC104822769 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 5.5e-51 206.1 239 51.0
ATR0762G049 Amborella trichopoda HOM05D004436 ORTHO05D005179 3.6e-50 203.4 422 33.9
Ca_27339_v3 Cicer arietinum L. HOM05D004436 ORTHO05D005179 6.1e-42 176.0 277 40.1
Zm00001eb166800 Zea mays HOM05D004436 ORTHO05D005179 6.1e-42 176.0 394 32.5
Ah.08g216510 Amaranthus hybridus HOM05D004436 ORTHO05D005179 1.1e-38 165.2 310 36.1
Os11g0615100 Oryza sativa ssp. japonica HOM05D004436 ORTHO05D005179 1.1e-38 165.2 387 32.8
AagrBONN_evm.TU.Sc2ySwM_368.2707 Anthoceros agrestis HOM05D004436 ORTHO05D005179 1.6e-37 161.4 455 29.2
DCAR_023423 Daucus carota HOM05D004436 ORTHO05D005179 2.0e-37 161.0 228 41.7
Pp3c8_24340 Physcomitrium patens HOM05D004436 ORTHO05D005179 2.0e-37 161.0 442 30.5
FAN14G5104 Fragaria x ananassa HOM05D002326 ORTHO05D005179 5.9e-37 159.5 230 40.4
SEGI_28110 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 3.2e-30 137.1 320 32.8
Aqoxy7G00272 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 2.7e-29 134.0 245 33.9
FAN27G1625 Fragaria x ananassa HOM05D004436 ORTHO05D005179 6.6e-28 129.4 363 32.2
Aqoxy2G02914 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 1.2e-26 125.2 139 48.2
THA.LOC104822775 Tarenaya hassleriana HOM05D004436 ORTHO05D005179 1.2e-26 125.2 184 50.0
FAN20G3048 Fragaria x ananassa HOM05D004436 ORTHO05D005179 3.6e-26 123.6 247 35.2
AL1G64440 Arabidopsis lyrata HOM05D004436 ORTHO05D005179 1.0e-25 122.1 156 44.2
Oeu004353.1 Olea europaea HOM05D004436 ORTHO05D005179 1.0e-25 122.1 109 57.8
SEGI_22335 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.4e-25 121.7 260 33.5
AUR62000997 Chenopodium quinoa HOM05D004436 ORTHO05D005179 1.2e-24 118.6 134 48.5
Mapoly0063s0055 Marchantia polymorpha HOM05D004436 ORTHO05D005179 1.3e-23 115.2 339 31.9
FAN15G1241 Fragaria x ananassa HOM05D004436 ORTHO05D005179 1.7e-23 114.8 105 56.2
FAN02G4131 Fragaria x ananassa HOM05D002326 ORTHO05D005179 3.4e-16 90.5 389 27.5
FAN09G3702 Fragaria x ananassa HOM05D002326 ORTHO05D005179 4.4e-16 90.1 390 28.2
Haze_06394 Corylus avellana HOM05D004436 ORTHO05D005179 5.8e-16 89.7 185 34.1
PGSC0003DMG400002436 Solanum tuberosum HOM05D004436 ORTHO05D005179 8.3e-15 85.9 92 48.9
CBR_g45967 Chara braunii HOM05D004436 ORTHO05D005179 3.2e-14 84.0 451 24.2
Dinv21190 Davidia involucrata HOM05D004436 ORTHO05D005179 5.4e-14 83.2 109 42.2
ATR0185G001 Amborella trichopoda HOM05D004436 ORTHO05D005179 2.1e-13 81.3 123 39.8
Aqoxy2G02915 Aquilegia oxysepala HOM05D004436 ORTHO05D005179 3.0e-12 77.4 141 34.8
TPR.G16496 Trifolium pratense HOM05D004436 ORTHO05D005179 2.8e-10 70.9 121 35.5
Peaxi162Scf01131g00007 Petunia axillaris HOM05D004436 ORTHO05D005179 8.1e-10 69.3 135 32.6
SMO144G0124 Selaginella moellendorffii HOM05D004436 ORTHO05D005179 1.2e-08 65.5 89 40.4
SEGI_36774 Sequoiadendron giganteum HOM05D004436 ORTHO05D005179 1.4e-06 58.5 116 31.9


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