Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p50650 Brassica napus HOM05D000448 ORTHO05D000291 2.4e-34 148.3 77 100.0
BolC1t05014H Brassica oleracea HOM05D000448 ORTHO05D000291 2.1e-33 145.2 77 98.7
Sp3g12190 Schrenkiella parvula HOM05D000448 ORTHO05D000291 6.9e-29 130.2 78 89.7
BcaB06g25417 Brassica carinata HOM05D000448 ORTHO05D000291 5.8e-28 127.1 78 85.9
Thhalv10022156m.g Eutrema salsugineum HOM05D000448 ORTHO05D000291 1.3e-27 125.9 76 89.5
CARHR088760 Cardamine hirsuta HOM05D000448 ORTHO05D000291 2.2e-27 125.2 78 83.3
A05p35470 Brassica napus HOM05D000448 ORTHO05D000291 3.8e-27 124.4 79 84.8
C05p53780 Brassica napus HOM05D000448 ORTHO05D000291 3.8e-27 124.4 79 84.8
BraA05t22357Z Brassica rapa HOM05D000448 ORTHO05D000291 3.8e-27 124.4 79 84.8
BolC5t34046H Brassica oleracea HOM05D000448 ORTHO05D000291 1.1e-26 122.9 79 83.5
AL3G26140 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 3.5e-25 117.9 78 78.2
AL795U10010 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 3.5e-25 117.9 78 78.2
BcaB03g14211 Brassica carinata HOM05D000448 ORTHO05D000291 3.9e-24 114.4 79 72.2
CARHR256100 Cardamine hirsuta HOM05D000448 ORTHO05D000291 3.9e-24 114.4 76 80.3
AT3G13950 Arabidopsis thaliana HOM05D000448 ORTHO05D000291 1.9e-23 112.1 78 71.8
Aa31LG8G1140 Aethionema arabicum HOM05D000448 ORTHO05D000291 3.3e-23 111.3 76 77.6
BcaC06g34956 Brassica carinata HOM05D000448 ORTHO05D000291 5.7e-23 110.5 78 74.4
BolC7t42665H Brassica oleracea HOM05D000448 ORTHO05D000291 5.7e-23 110.5 78 74.4
Carub.0003s1352 Capsella rubella HOM05D000448 ORTHO05D000291 2.1e-22 108.6 77 74.0
Aa31LG2G18310 Aethionema arabicum HOM05D000448 ORTHO05D000291 9.0e-21 103.2 74 71.6
BcaC07g39158 Brassica carinata HOM05D000448 ORTHO05D000291 3.2e-18 94.7 76 71.1
C08p21510 Brassica napus HOM05D000448 ORTHO05D000291 3.2e-18 94.7 76 71.1
BolC8t49791H Brassica oleracea HOM05D000448 ORTHO05D000291 3.2e-18 94.7 76 71.1
BcaB03g11909 Brassica carinata HOM05D000448 ORTHO05D000291 4.2e-18 94.4 76 73.7
THA.LOC104810361 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 9.3e-18 93.2 88 59.1
THA.LOC104815630 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 3.6e-17 91.3 87 60.9
AT4G13266 Arabidopsis thaliana HOM05D000448 ORTHO05D000291 1.1e-15 86.3 79 57.0
A08p28540 Brassica napus HOM05D000448 ORTHO05D000291 3.3e-15 84.7 75 62.7
Carub.0007s2994 Capsella rubella HOM05D000448 ORTHO05D000291 3.3e-15 84.7 74 62.2
BraA08t34782Z Brassica rapa HOM05D000448 ORTHO05D000291 4.3e-15 84.3 75 61.3
AL9U10580 Arabidopsis lyrata HOM05D000448 ORTHO05D000291 1.3e-14 82.8 78 56.4
Aa31LG10G13200 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.6e-14 82.4 81 60.5
Aa31LG1G8810 Aethionema arabicum HOM05D000448 ORTHO05D000291 5.9e-12 73.9 80 50.0
Aa31LG10G810 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.1e-10 69.7 83 47.0
Aa31LG11G7450 Aethionema arabicum HOM05D000448 ORTHO05D000291 1.1e-10 69.7 76 48.7
Aa31LG10G1220 Aethionema arabicum HOM05D000448 ORTHO05D000291 6.1e-09 63.9 78 42.3
Aa31LG7G11610 Aethionema arabicum HOM05D000448 ORTHO05D000291 7.9e-09 63.5 66 54.5
Lj3g0007023 Lotus japonicus HOM05D000448 ORTHO05D000291 3.0e-08 61.6 76 48.7
Lalb_Chr01g0015511 Lupinus albus HOM05D000448 ORTHO05D000291 3.9e-08 61.2 75 50.7
Cpa.g.sc25.92 Carica papaya HOM05D000448 ORTHO05D000291 1.1e-07 59.7 68 44.1
COL.COLO4_30786 Corchorus olitorius HOM05D000448 ORTHO05D000291 1.1e-07 59.7 80 47.5
Ciclev10027103m.g Citrus clementina HOM05D000448 ORTHO05D000291 2.0e-07 58.9 79 46.8
Psat3g083880 Pisum sativum HOM05D000448 ORTHO05D000291 2.0e-07 58.9 76 44.7
arahy.Tifrunner.gnm1.ann1.ZI8BLB Arachis hypogaea HOM05D000448 ORTHO05D000291 4.4e-07 57.8 82 39.0
Aa31sc1937G10 Aethionema arabicum HOM05D000448 ORTHO05D000291 5.7e-07 57.4 75 44.0
Aa31sc2154G10 Aethionema arabicum HOM05D000448 ORTHO05D000291 5.7e-07 57.4 75 44.0
MSTRG.12045 Avicennia marina HOM05D000448 ORTHO05D000291 7.4e-07 57.0 74 47.3
Medtr7g087540 Medicago truncatula HOM05D000448 ORTHO05D000291 9.7e-07 56.6 76 43.4
Hma1.2p1_0732F.1_g210020 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.3e-06 56.2 75 44.0
THA.LOC104822652 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 1.7e-06 55.8 76 40.8
THA.LOC104822771 Tarenaya hassleriana HOM05D000448 ORTHO05D000291 1.7e-06 55.8 76 40.8
TPR.G23655 Trifolium pratense HOM05D000448 ORTHO05D000291 1.7e-06 55.8 78 42.3
MSTRG.12047 Avicennia marina HOM05D000448 ORTHO05D000291 2.2e-06 55.5 74 44.6
SalBow1G3724 Salvia bowleyana HOM05D000448 ORTHO05D000291 2.2e-06 55.5 76 40.8
Phvul.007G156400 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 2.8e-06 55.1 75 38.7
arahy.Tifrunner.gnm1.ann1.PR1UBX Arachis hypogaea HOM05D000448 ORTHO05D000291 3.7e-06 54.7 82 37.8
TPR.G23650 Trifolium pratense HOM05D000448 ORTHO05D000291 3.7e-06 54.7 77 39.0
GSVIVG01015139001 Vitis vinifera HOM05D000448 ORTHO05D000291 3.7e-06 54.7 73 42.5
AUR62031816 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.8e-06 54.3 75 34.7
SalBow4G2869 Salvia bowleyana HOM05D000448 ORTHO05D000291 4.8e-06 54.3 75 45.3
VMungo1383G3639 Vigna mungo HOM05D000448 ORTHO05D000291 4.8e-06 54.3 75 41.3
CANSAT25G3158 Cannabis sativa HOM05D000448 ORTHO05D000291 6.3e-06 53.9 78 38.5
Carub.0007s2992 Capsella rubella HOM05D000448 ORTHO05D000291 6.3e-06 53.9 42 57.1
PGR044G1992 Punica granatum HOM05D000448 ORTHO05D000291 6.3e-06 53.9 74 45.9
Duzib192G1008 Durio zibethinus HOM05D000448 ORTHO05D000291 8.2e-06 53.5 83 45.8
Gohir.D05G139266 Gossypium hirsutum HOM05D000448 ORTHO05D000291 8.2e-06 53.5 79 46.8
MD12G1213900 Malus domestica HOM05D000448 ORTHO05D000291 8.2e-06 53.5 86 40.7
TPR.G23679 Trifolium pratense HOM05D000448 ORTHO05D000291 8.2e-06 53.5 77 41.6


User provided reference genes

Program Settings