Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p50330 Brassica napus HOM05D000643 ORTHO05D000663 7.4e-48 193.4 86 100.0
Thhalv10022376m.g Eutrema salsugineum HOM05D000643 ORTHO05D000663 5.4e-14 80.9 88 51.1
BcaB06g25402 Brassica carinata HOM05D000643 ORTHO05D000663 1.2e-13 79.7 88 50.0
A05p35150 Brassica napus HOM05D000643 ORTHO05D000663 1.2e-13 79.7 88 50.0
BraA05t22328Z Brassica rapa HOM05D000643 ORTHO05D000663 1.2e-13 79.7 88 50.0
CARHR089140 Cardamine hirsuta HOM05D000643 ORTHO05D000663 2.7e-13 78.6 88 50.0
BcaC05g29102 Brassica carinata HOM05D000643 ORTHO05D000663 5.9e-13 77.4 88 48.9
C05p53160 Brassica napus HOM05D000643 ORTHO05D000663 5.9e-13 77.4 88 48.9
BolC5t33994H Brassica oleracea HOM05D000643 ORTHO05D000663 5.9e-13 77.4 88 48.9
AL6G38170 Arabidopsis lyrata HOM05D000643 ORTHO05D000663 2.3e-12 75.5 88 47.7
Carub.0006s2396 Capsella rubella HOM05D000643 ORTHO05D000663 3.8e-12 74.7 88 47.7
BcaC09g48392 Brassica carinata HOM05D000643 ORTHO05D000663 4.7e-10 67.8 82 45.1
Cc00_g31720 Coffea canephora HOM05D000643 ORTHO05D000663 9.8e-08 60.1 83 39.8
Thhalv10020963m.g Eutrema salsugineum HOM05D000643 ORTHO05D000663 3.7e-07 58.2 85 35.3
CARHR089130 Cardamine hirsuta HOM05D000643 ORTHO05D000663 4.9e-07 57.8 84 36.9
AT3G14225 Arabidopsis thaliana HOM05D000643 ORTHO05D000663 6.3e-07 57.4 85 36.5
CARHR213390 Cardamine hirsuta HOM05D000643 ORTHO05D000663 6.3e-07 57.4 85 38.8
Sp3g12510 Schrenkiella parvula HOM05D000643 ORTHO05D000663 8.3e-07 57.0 84 36.9
BcaC08g44149 Brassica carinata HOM05D000643 ORTHO05D000663 1.4e-06 56.2 84 35.7
BolC6t36731H Brassica oleracea HOM05D000643 ORTHO05D000663 1.4e-06 56.2 84 35.7
Cc02_g33020 Coffea canephora HOM05D000643 ORTHO05D000663 1.4e-06 56.2 83 38.6
BcaC05g29103 Brassica carinata HOM05D000643 ORTHO05D000663 2.4e-06 55.5 84 36.9
A05p17820 Brassica napus HOM05D000643 ORTHO05D000663 2.4e-06 55.5 84 35.7
C05p53170 Brassica napus HOM05D000643 ORTHO05D000663 2.4e-06 55.5 84 36.9
C06p15460 Brassica napus HOM05D000643 ORTHO05D000663 2.4e-06 55.5 84 35.7
BolC5t33995H Brassica oleracea HOM05D000643 ORTHO05D000663 2.4e-06 55.5 84 36.9
BraA05t20672Z Brassica rapa HOM05D000643 ORTHO05D000663 2.4e-06 55.5 84 35.7
A05p35160 Brassica napus HOM05D000643 ORTHO05D000663 3.1e-06 55.1 84 36.9
BraA05t22329Z Brassica rapa HOM05D000643 ORTHO05D000663 3.1e-06 55.1 84 36.9
TAR623G1100 Trochodendron aralioides HOM05D000643 ORTHO05D000663 3.1e-06 55.1 84 38.1
AL7G48560 Arabidopsis lyrata HOM05D000643 ORTHO05D000663 4.1e-06 54.7 85 37.6
BcaB04g17047 Brassica carinata HOM05D000643 ORTHO05D000663 5.4e-06 54.3 83 36.1
CiPaw.01G212700 Carya illinoinensis HOM05D000643 ORTHO05D000663 7.0e-06 53.9 96 36.5
Potri.017G134601 Populus trichocarpa HOM05D000643 ORTHO05D000663 9.2e-06 53.5 81 37.0


User provided reference genes

Program Settings