Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p49440 Brassica napus HOM05D000171 ORTHO05D039981 2.5e-49 198.4 93 100.0
BcaC09g48468 Brassica carinata HOM05D000171 ORTHO05D039981 2.5e-33 145.2 74 90.5
BolC1t05731H Brassica oleracea HOM05D000171 ORTHO05D000101 2.7e-27 125.2 74 81.1
BcaC09g47783 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-27 123.6 76 76.3
BcaC09g47784 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-27 123.6 76 76.3
BNapus_Darmor_BZH_scaffold_78p00970 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-26 121.3 74 79.7
AL3G14710 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.4e-15 85.5 67 59.7
BcaB04g21336 Brassica carinata HOM05D000171 ORTHO05D000101 5.8e-14 80.9 73 58.9
BcaC09g47782 Brassica carinata HOM05D000171 ORTHO05D000101 5.8e-14 80.9 63 61.9
BolC1t05729H Brassica oleracea HOM05D000171 ORTHO05D000101 5.8e-14 80.9 63 61.9
BcaC05g26731 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-13 79.3 59 67.8
BNapus_Darmor_BZH_scaffold_118p00140 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-12 75.9 71 56.3
BraA01t04439Z Brassica rapa HOM05D000171 ORTHO05D000101 2.4e-12 75.5 70 55.7
Sp3g03500 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.5e-09 66.2 63 50.8
CARHR078890 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.3e-09 63.9 66 50.0
BcaB04g21337 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-08 62.4 50 60.0
AL7G22270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-07 60.1 64 48.4
A09p12470 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-07 60.1 69 42.0
BraA09t36891Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-07 60.1 69 42.0
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.4e-07 59.7 65 46.2
AT3G04660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.8e-07 59.3 57 47.4
BcaC04g22840 Brassica carinata HOM05D000171 ORTHO05D000101 6.9e-07 57.4 57 49.1
C09p14760 Brassica napus HOM05D000171 ORTHO05D000101 6.9e-07 57.4 57 49.1
BolC9t54378H Brassica oleracea HOM05D000171 ORTHO05D000101 6.9e-07 57.4 57 49.1
CARHR078870 Cardamine hirsuta HOM05D000171 ORTHO05D000101 9.0e-07 57.0 60 48.3
Carub.0007s1067 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-06 56.2 64 45.3
AT4G29970 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.4e-06 55.1 60 50.0
AL3G14700 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.4e-06 54.7 56 48.2
Thhalv10026790m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-06 53.9 91 35.2


User provided reference genes

Program Settings