Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p49340 Brassica napus HOM05D005295 ORTHO05D005962 1.1e-69 266.5 136 100.0
BcaC09g48479 Brassica carinata HOM05D005295 ORTHO05D005962 2.1e-68 262.3 136 97.8
BolC1t04893H Brassica oleracea HOM05D005295 ORTHO05D005962 2.1e-68 262.3 136 97.8
A01p38800 Brassica napus HOM05D005295 ORTHO05D005962 6.0e-68 260.8 136 97.8
BraA01t03927Z Brassica rapa HOM05D005295 ORTHO05D005962 6.0e-68 260.8 136 97.8
BcaB04g20941 Brassica carinata HOM05D001464 ORTHO05D005962 2.3e-59 232.3 132 90.2
Carub.0003s1487 Capsella rubella HOM05D005295 ORTHO05D005962 2.1e-44 182.6 134 71.6
AL3G27610 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 5.6e-34 147.9 95 77.9
Medtr2g078650 Medicago truncatula HOM05D005295 ORTHO05D005962 6.3e-17 91.3 137 41.6
Psat0s1402g0040 Pisum sativum HOM05D005295 ORTHO05D005962 4.1e-16 88.6 137 40.1
MD03G1231400 Malus domestica HOM05D005295 ORTHO05D005962 5.3e-16 88.2 122 40.2
Prupe.4G176600 Prunus persica HOM05D005295 ORTHO05D005962 6.9e-16 87.8 122 40.2
FvH4_3g19520 Fragaria vesca HOM05D005295 ORTHO05D005962 1.2e-15 87.0 118 43.2
Ca_03531_v3 Cicer arietinum L. HOM05D005295 ORTHO05D005962 5.9e-15 84.7 129 38.0
Actinidia12794 Actinidia chinensis HOM05D005295 ORTHO05D005962 2.2e-14 82.8 125 39.2
BolC1t02323H Brassica oleracea HOM05D005295 ORTHO05D005962 2.2e-14 82.8 124 37.1
FAN21G0215 Fragaria x ananassa HOM05D005295 ORTHO05D005962 2.2e-14 82.8 118 42.4
MSTRG.6822 Avicennia marina HOM05D005295 ORTHO05D005962 2.9e-14 82.4 113 42.5
BraA01t01821Z Brassica rapa HOM05D005295 ORTHO05D005962 2.9e-14 82.4 117 38.5
FAN25G2205 Fragaria x ananassa HOM05D005295 ORTHO05D005962 2.9e-14 82.4 118 42.4
Hma1.2p1_0387F.1_g141920 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 2.9e-14 82.4 125 40.8
TWI38G0013 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 2.9e-14 82.4 121 40.5
A01p18770 Brassica napus HOM05D005295 ORTHO05D005962 5.0e-14 81.6 122 37.7
Eucgr.F01159 Eucalyptus grandis HOM05D005295 ORTHO05D005962 5.0e-14 81.6 125 38.4
Lsat_1_v5_gn_5_128440 Lactuca sativa HOM05D005295 ORTHO05D005962 5.0e-14 81.6 120 39.2
Lj8A154T78 Lonicera japonica HOM05D005295 ORTHO05D005962 5.0e-14 81.6 124 37.1
TWI39G0015 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 5.0e-14 81.6 121 38.8
Thhalv10026112m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 6.5e-14 81.3 132 35.6
Aa31LG5G9970 Aethionema arabicum HOM05D005295 ORTHO05D005962 1.1e-13 80.5 122 36.9
DCAR_013119 Daucus carota HOM05D005295 ORTHO05D005962 1.1e-13 80.5 119 37.8
ECA234G3281 Erigeron canadensis HOM05D005295 ORTHO05D005962 1.1e-13 80.5 112 40.2
C01p23710 Brassica napus HOM05D005295 ORTHO05D005962 1.4e-13 80.1 122 36.9
BcaNung06687 Brassica carinata HOM05D005295 ORTHO05D005962 1.9e-13 79.7 122 36.9
Migut.M00784 Erythranthe guttata HOM05D005295 ORTHO05D005962 1.9e-13 79.7 117 39.3
Glyma.13G273800 Glycine max HOM05D005295 ORTHO05D005962 1.9e-13 79.7 125 38.4
Lj3g0021836 Lotus japonicus HOM05D005295 ORTHO05D005962 1.9e-13 79.7 133 38.3
SalBow8G4458 Salvia bowleyana HOM05D005295 ORTHO05D005962 1.9e-13 79.7 117 41.0
Ciclev10009380m.g Citrus clementina HOM05D005295 ORTHO05D005962 2.5e-13 79.3 116 38.8
THA.LOC104811877 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 2.5e-13 79.3 132 35.6
unitig_0.g1149 Utricularia gibba HOM05D005295 ORTHO05D005962 2.5e-13 79.3 118 39.8
Ciclev10009383m.g Citrus clementina HOM05D005295 ORTHO05D005962 3.2e-13 79.0 116 38.8
COL.COLO4_36711 Corchorus olitorius HOM05D005295 ORTHO05D005962 3.2e-13 79.0 113 38.9
Manes.03G106500 Manihot esculenta HOM05D005295 ORTHO05D005962 3.2e-13 79.0 117 38.5
RcHm_v2.0_Chr5g0032761 Rosa chinensis HOM05D005295 ORTHO05D005962 3.2e-13 79.0 118 40.7
GSVIVG01014296001 Vitis vinifera HOM05D005295 ORTHO05D005962 3.2e-13 79.0 120 37.5
CAN.G213.18 Capsicum annuum HOM05D005295 ORTHO05D005962 4.2e-13 78.6 112 39.3
CARHR235220 Cardamine hirsuta HOM05D005295 ORTHO05D005962 4.2e-13 78.6 118 38.1
PGR083G0729 Punica granatum HOM05D005295 ORTHO05D005962 4.2e-13 78.6 112 40.2
Lalb_Chr20g0109501 Lupinus albus HOM05D005295 ORTHO05D005962 5.5e-13 78.2 125 35.2
PSO675G2991 Papaver somniferum HOM05D005295 ORTHO05D005962 5.5e-13 78.2 113 38.1
SGA_v2.0_scaffold34G13800 Striga asiatica HOM05D005295 ORTHO05D005962 5.5e-13 78.2 122 39.3
Cc05_g11790 Coffea canephora HOM05D005295 ORTHO05D005962 7.2e-13 77.8 122 36.9
Sopen12g005670 Solanum pennellii HOM05D005295 ORTHO05D005962 7.2e-13 77.8 132 37.1
HanXRQChr12g0361161 Helianthus annuus HOM05D005295 ORTHO05D005962 9.4e-13 77.4 113 38.9
Rhsim06G0201600 Rhododendron simsii HOM05D005295 ORTHO05D005962 9.4e-13 77.4 109 43.1
arahy.Tifrunner.gnm1.ann1.3CLR9I Arachis hypogaea HOM05D005295 ORTHO05D005962 1.2e-12 77.0 122 36.1
C02p17830 Brassica napus HOM05D005295 ORTHO05D005962 1.2e-12 77.0 137 33.6
Duzib213G0204 Durio zibethinus HOM05D005295 ORTHO05D005962 1.2e-12 77.0 115 39.1
Sp7g25480 Schrenkiella parvula HOM05D005295 ORTHO05D005962 1.2e-12 77.0 115 36.5
CSS0001236 Camellia sinensis var. sinensis HOM05D005295 ORTHO05D005962 2.1e-12 76.3 117 37.6
arahy.Tifrunner.gnm1.ann1.B1NQ7W Arachis hypogaea HOM05D005295 ORTHO05D005962 2.7e-12 75.9 122 35.2
BcaNung06688 Brassica carinata HOM05D005295 ORTHO05D005962 2.7e-12 75.9 122 35.2
CiPaw.11G171800 Carya illinoinensis HOM05D005295 ORTHO05D005962 2.7e-12 75.9 117 36.8
Nitab4.5_0000332g0010 Nicotiana tabacum HOM05D005295 ORTHO05D005962 2.7e-12 75.9 134 35.1
VMungo1080G0752 Vigna mungo HOM05D005295 ORTHO05D005962 2.7e-12 75.9 133 36.8
AL7G25230 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 3.6e-12 75.5 90 43.3
AT4G27540 Arabidopsis thaliana HOM05D005295 ORTHO05D005962 3.6e-12 75.5 116 36.2
Carub.0007s1331 Capsella rubella HOM05D005295 ORTHO05D005962 3.6e-12 75.5 90 43.3
Haze_09452 Corylus avellana HOM05D005295 ORTHO05D005962 3.6e-12 75.5 122 36.1
Phvul.005G075000 Phaseolus vulgaris HOM05D005295 ORTHO05D005962 3.6e-12 75.5 130 33.8
PGSC0003DMG400015366 Solanum tuberosum HOM05D005295 ORTHO05D005962 3.6e-12 75.5 132 36.4
BolC2t07912H Brassica oleracea HOM05D005295 ORTHO05D005962 4.7e-12 75.1 131 32.1
Cpa.g.sc622.2 Carica papaya HOM05D005295 ORTHO05D005962 4.7e-12 75.1 110 38.2
ClCG11G017890 Citrullus lanatus HOM05D005295 ORTHO05D005962 4.7e-12 75.1 122 36.9
Gohir.A04G035200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 4.7e-12 75.1 112 40.2
BcaB05g22086 Brassica carinata HOM05D005295 ORTHO05D005962 6.1e-12 74.7 116 31.9
BcaC03g14369 Brassica carinata HOM05D005295 ORTHO05D005962 6.1e-12 74.7 131 32.1
BcaC03g14372 Brassica carinata HOM05D005295 ORTHO05D005962 6.1e-12 74.7 140 32.9
BolC2t07916H Brassica oleracea HOM05D005295 ORTHO05D005962 6.1e-12 74.7 140 32.9
Sed0001385 Sechium edule HOM05D005295 ORTHO05D005962 6.1e-12 74.7 122 36.1
Solyc12g013910.2 Solanum lycopersicum HOM05D005295 ORTHO05D005962 1.0e-11 73.9 132 35.6
Cfa020562 Carpinus fangiana HOM05D005295 ORTHO05D005962 1.4e-11 73.6 122 34.4
CsaV3_4G033520 Cucumis sativus L. HOM05D005295 ORTHO05D005962 1.4e-11 73.6 122 35.2
FAN11G0135 Fragaria x ananassa HOM05D005295 ORTHO05D005962 1.4e-11 73.6 118 39.8
Sabra11G0101800 Salix brachista HOM05D005295 ORTHO05D005962 1.4e-11 73.6 117 36.8
MELO3C025603.2 Cucumis melo HOM05D005295 ORTHO05D005962 1.8e-11 73.2 122 36.1
Thecc.07G095500 Theobroma cacao HOM05D005295 ORTHO05D005962 1.8e-11 73.2 118 37.3
Aqoxy1G02337 Aquilegia oxysepala HOM05D005295 ORTHO05D005962 2.3e-11 72.8 124 32.3
CANSAT56G1083 Cannabis sativa HOM05D005295 ORTHO05D005962 2.3e-11 72.8 116 36.2
Gohir.D05G348200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 2.3e-11 72.8 112 39.3
Gorai.009G376000 Gossypium raimondii HOM05D005295 ORTHO05D005962 2.3e-11 72.8 112 39.3
Potri.001G396900 Populus trichocarpa HOM05D005295 ORTHO05D005962 2.3e-11 72.8 115 36.5
CDE05G1939 Ceratophyllum demersum HOM05D005295 ORTHO05D005962 3.9e-11 72.0 137 32.1
Oeu019302.2 Olea europaea HOM05D005295 ORTHO05D005962 5.1e-11 71.6 133 34.6
Potri.011G116200 Populus trichocarpa HOM05D005295 ORTHO05D005962 5.1e-11 71.6 117 35.9
Zm00001eb231100 Zea mays HOM05D005295 ORTHO05D005962 5.1e-11 71.6 127 39.4
SGA_v2.0_scaffold73G24237 Striga asiatica HOM05D005295 ORTHO05D005962 6.7e-11 71.2 122 37.7
Hund22882 Selenicereus undatus HOM05D005295 ORTHO05D005962 8.8e-11 70.9 126 38.1
C02p17850 Brassica napus HOM05D005295 ORTHO05D005962 1.1e-10 70.5 137 32.1
SMO285G0011 Selaginella moellendorffii HOM05D005295 ORTHO05D005962 2.6e-10 69.3 123 35.0
THA.LOC104818140 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 3.3e-10 68.9 89 48.3
HPP92_003730 Vanilla planifolia HOM05D005295 ORTHO05D005962 3.3e-10 68.9 126 34.9
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 4.4e-10 68.6 118 32.2
Sc16g0007150 Simmondsia chinensis HOM05D005295 ORTHO05D005962 4.4e-10 68.6 133 31.6
TPR.G7946 Trifolium pratense HOM05D005295 ORTHO05D005962 5.7e-10 68.2 102 37.3
Pp3c9_10810 Physcomitrium patens HOM05D005295 ORTHO05D005962 1.3e-09 67.0 126 35.7
AUR62036172 Chenopodium quinoa HOM05D005295 ORTHO05D005962 1.7e-09 66.6 99 39.4
Nn1g04175 Nelumbo nucifera HOM05D005295 ORTHO05D005962 2.2e-09 66.2 110 35.5
Sabra16G0260000 Salix brachista HOM05D005295 ORTHO05D005962 3.7e-09 65.5 112 33.9
Ah.06g184530 Amaranthus hybridus HOM05D005295 ORTHO05D005962 4.8e-09 65.1 90 42.2
EL10Ac4g08225 Beta vulgaris HOM05D005295 ORTHO05D005962 4.8e-09 65.1 86 43.0
Mapoly0124s0020 Marchantia polymorpha HOM05D005295 ORTHO05D005962 4.8e-09 65.1 106 35.8
A02p10710 Brassica napus HOM05D005295 ORTHO05D005962 8.2e-09 64.3 134 29.9
BraA02t06134Z Brassica rapa HOM05D005295 ORTHO05D005962 1.4e-08 63.5 132 28.8
SEGI_06803 Sequoiadendron giganteum HOM05D005295 ORTHO05D005962 1.4e-08 63.5 110 34.5
Thhalv10015755m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 1.2e-07 60.5 127 32.3
AUR62019458 Chenopodium quinoa HOM05D005295 ORTHO05D005962 3.4e-07 58.9 99 37.4
Dinv12314 Davidia involucrata HOM05D005295 ORTHO05D005962 3.4e-07 58.9 77 44.2
ATR0150G019 Amborella trichopoda HOM05D005295 ORTHO05D005962 4.5e-07 58.5 127 31.5
Os09g0134400 Oryza sativa ssp. japonica HOM05D005295 ORTHO05D005962 4.5e-07 58.5 105 37.1
Eucgr.F01198 Eucalyptus grandis HOM05D005295 ORTHO05D005962 7.7e-07 57.8 80 40.0
Peaxi162Scf00000g00314 Petunia axillaris HOM05D005295 ORTHO05D005962 7.7e-07 57.8 97 35.1
QL08p022700 Quercus lobata HOM05D005295 ORTHO05D005962 8.5e-06 54.3 87 35.6


User provided reference genes

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