Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p49250 Brassica napus HOM05D000272 ORTHO05D096716 1.2e-73 279.6 136 100.0
AT1G75410 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 1.1e-08 63.9 60 51.7
AL1G32420 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 3.1e-08 62.4 41 68.3
AT1G19700 Arabidopsis thaliana HOM05D000272 ORTHO05D000164 3.1e-08 62.4 41 68.3
BcaB02g07023 Brassica carinata HOM05D000272 ORTHO05D000164 3.1e-08 62.4 41 68.3
Carub.0001s1924 Capsella rubella HOM05D000272 ORTHO05D000164 3.1e-08 62.4 41 68.3
CARHR020220 Cardamine hirsuta HOM05D000272 ORTHO05D000164 3.1e-08 62.4 41 68.3
Aa31LG4G5620 Aethionema arabicum HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
AL2G35360 Arabidopsis lyrata HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BcaB05g24906 Brassica carinata HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BcaC03g15573 Brassica carinata HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BcaC08g45579 Brassica carinata HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BcaC08g47018 Brassica carinata HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BcaC08g47354 Brassica carinata HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
A02p19930 Brassica napus HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
A07p40980 Brassica napus HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
C02p32570 Brassica napus HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
C06p32610 Brassica napus HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
C06p49420 Brassica napus HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BolC2t09287H Brassica oleracea HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BolC6t38383H Brassica oleracea HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BolC6t39977H Brassica oleracea HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BraA02t07029Z Brassica rapa HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
BraA07t31636Z Brassica rapa HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
Carub.0002s2228 Capsella rubella HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
CARHR068790 Cardamine hirsuta HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
Thhalv10018381m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
Sp5g30550 Schrenkiella parvula HOM05D000272 ORTHO05D000164 4.1e-08 62.0 41 65.9
A06p15820 Brassica napus HOM05D000272 ORTHO05D000164 5.3e-08 61.6 68 48.5
C05p18140 Brassica napus HOM05D000272 ORTHO05D000164 5.3e-08 61.6 68 48.5
BolC5t30521H Brassica oleracea HOM05D000272 ORTHO05D000164 5.3e-08 61.6 68 48.5
BraA06t24692Z Brassica rapa HOM05D000272 ORTHO05D000164 5.3e-08 61.6 68 48.5
Aa31LG7G4280 Aethionema arabicum HOM05D000272 ORTHO05D000164 9.1e-08 60.8 41 63.4
Sp1g17530 Schrenkiella parvula HOM05D000272 ORTHO05D000164 9.1e-08 60.8 66 48.5
THA.LOC104811363 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 9.1e-08 60.8 41 63.4
Thhalv10007267m.g Eutrema salsugineum HOM05D000272 ORTHO05D000164 1.2e-07 60.5 41 63.4
A08p29710 Brassica napus HOM05D000149 ORTHO05D000164 1.5e-07 60.1 66 48.5
BraA08t34906Z Brassica rapa HOM05D000272 ORTHO05D000164 1.5e-07 60.1 66 48.5
THA.LOC104809265 Tarenaya hassleriana HOM05D000272 ORTHO05D000164 2.0e-07 59.7 41 61.0
BcaB07g31983 Brassica carinata HOM05D000272 ORTHO05D000164 2.6e-07 59.3 38 68.4
A07p28830 Brassica napus HOM05D000272 ORTHO05D000164 3.4e-07 58.9 41 63.4
BraA07t30526Z Brassica rapa HOM05D000272 ORTHO05D000164 3.4e-07 58.9 41 63.4
C08p19690 Brassica napus HOM05D000272 ORTHO05D000164 4.5e-07 58.5 35 71.4
BolC8t49605H Brassica oleracea HOM05D000272 ORTHO05D000164 1.0e-06 57.4 35 68.6
CAN.G851.41 Capsicum annuum HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
Dinv39460 Davidia involucrata HOM05D000272 ORTHO05D000164 1.0e-06 57.4 41 61.0
Nitab4.5_0001861g0090 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
Nitab4.5_0005779g0040 Nicotiana tabacum HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
Peaxi162Scf00189g00919 Petunia axillaris HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
Solyc04g080790.3 Solanum lycopersicum HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
Sopen04g034380 Solanum pennellii HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
PGSC0003DMG400003751 Solanum tuberosum HOM05D000272 ORTHO05D000164 1.0e-06 57.4 40 62.5
Migut.C00771 Erythranthe guttata HOM05D000272 ORTHO05D000164 1.3e-06 57.0 46 60.9
Hma1.2p1_1194F.1_g265730 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 1.3e-06 57.0 41 61.0
BcaB03g12903 Brassica carinata HOM05D000272 ORTHO05D000164 1.7e-06 56.6 35 68.6
Hma1.2p1_0216F.1_g090910 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 1.7e-06 56.6 33 72.7
Atru.chr13.399 Acer truncatum HOM05D000272 ORTHO05D000164 2.2e-06 56.2 66 45.5
Ciclev10000508m.g Citrus clementina HOM05D000272 ORTHO05D000164 2.9e-06 55.8 66 43.9
Cc10_g02400 Coffea canephora HOM05D000272 ORTHO05D000164 2.9e-06 55.8 40 60.0
COL.COLO4_26237 Corchorus olitorius HOM05D000272 ORTHO05D000164 2.9e-06 55.8 66 43.9
Gohir.D07G116800 Gossypium hirsutum HOM05D000272 ORTHO05D000164 2.9e-06 55.8 67 43.3
Thecc.08G034200 Theobroma cacao HOM05D000272 ORTHO05D000164 2.9e-06 55.8 66 43.9
VMungo0647G0235 Vigna mungo HOM05D000272 ORTHO05D000164 2.9e-06 55.8 41 58.5
arahy.Tifrunner.gnm1.ann1.253MV8 Arachis hypogaea HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
arahy.Tifrunner.gnm1.ann1.WJT401 Arachis hypogaea HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Ca_13382_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Glyma.04G029100 Glycine max HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Glyma.06G029100 Glycine max HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Glyma.14G070700 Glycine max HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 61.0
Lj1g0003058 Lotus japonicus HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Medtr1g023050 Medicago truncatula HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Phvul.009G060400 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
Psat6g007960 Pisum sativum HOM05D000272 ORTHO05D000164 3.8e-06 55.5 41 58.5
arahy.Tifrunner.gnm1.ann1.PU29YL Arachis hypogaea HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Dinv31790 Davidia involucrata HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Duzib116G0523 Durio zibethinus HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Glyma.17G254000 Glycine max HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Phvul.001G011000 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Phvul.001G011100 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Potri.002G031000 Populus trichocarpa HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 61.0
Sabra02G0024800 Salix brachista HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 61.0
vmacro08833 Vaccinium macrocarpon HOM05D000272 ORTHO05D000164 5.0e-06 55.1 42 61.9
VMungo0647G1666 Vigna mungo HOM05D000272 ORTHO05D000164 5.0e-06 55.1 41 58.5
Gohir.A06G007400 Gossypium hirsutum HOM05D000272 ORTHO05D000164 6.5e-06 54.7 65 44.6
Gohir.D06G003100 Gossypium hirsutum HOM05D000272 ORTHO05D000164 6.5e-06 54.7 65 44.6
Gorai.010G007800 Gossypium raimondii HOM05D000272 ORTHO05D000164 6.5e-06 54.7 65 44.6
Lj4A33T84 Lonicera japonica HOM05D000272 ORTHO05D000164 6.5e-06 54.7 41 58.5
Nitab4.5_0006540g0040 Nicotiana tabacum HOM05D000272 ORTHO05D000164 6.5e-06 54.7 64 43.8
Actinidia07944 Actinidia chinensis HOM05D000272 ORTHO05D000164 8.5e-06 54.3 42 61.9
Ah.12g059270 Amaranthus hybridus HOM05D000272 ORTHO05D000164 8.5e-06 54.3 43 60.5
CSS0045405 Camellia sinensis var. sinensis HOM05D000272 ORTHO05D000164 8.5e-06 54.3 39 64.1
CiPaw.08G061100 Carya illinoinensis HOM05D000272 ORTHO05D000164 8.5e-06 54.3 65 43.1
AUR62036372 Chenopodium quinoa HOM05D000272 ORTHO05D000164 8.5e-06 54.3 43 60.5
Ca_27160_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 8.5e-06 54.3 68 45.6
Phvul.009G004801 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 8.5e-06 54.3 39 59.0


User provided reference genes

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