Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 6.6e-62 240.7 140 100.0
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 8.1e-60 233.8 140 95.7
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-58 229.2 140 95.0
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 7.1e-56 220.7 140 94.3
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-45 185.7 150 79.3
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-39 166.8 92 100.0
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 2.5e-37 159.1 92 95.7
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 3.9e-30 135.2 128 66.4
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-21 106.7 57 100.0
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 3.3e-21 105.5 57 98.2
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 3.3e-21 105.5 57 98.2
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-19 100.5 57 94.7
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 4.0e-19 98.6 114 61.4
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 4.5e-18 95.1 57 91.2
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-16 90.5 57 82.5
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-15 85.9 47 95.7
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.8e-14 83.2 45 97.8
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 4.3e-13 78.6 56 80.4
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 1.8e-11 73.2 39 100.0
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 1.8e-11 73.2 39 100.0
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-11 73.2 39 100.0
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 9.0e-11 70.9 39 97.4
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-10 69.7 39 94.9
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-10 69.7 39 94.9
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-10 69.7 39 94.9
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 3.4e-10 68.9 39 94.9
C04p26220 Brassica napus HOM05D004128 ORTHO05D040950 5.9e-10 68.2 41 90.2
BolC4t24184H Brassica oleracea HOM05D004128 ORTHO05D040950 5.9e-10 68.2 41 90.2
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 1.7e-09 66.6 57 61.4
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 5.0e-09 65.1 57 59.6
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 5.0e-09 65.1 59 66.1
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 6.5e-09 64.7 57 59.6
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 6.5e-09 64.7 57 59.6
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 8.5e-09 64.3 59 66.1
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 1.9e-08 63.2 57 59.6
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.5e-08 62.8 59 64.4
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 3.2e-08 62.4 59 64.4
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 4.2e-08 62.0 59 64.4
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 4.2e-08 62.0 57 57.9
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 7.2e-08 61.2 57 57.9
C03p16280 Brassica napus HOM05D004128 ORTHO05D008395 7.2e-08 61.2 55 67.3
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 7.2e-08 61.2 57 57.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 9.3e-08 60.8 57 57.9
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.6e-07 60.1 57 57.9
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-07 58.9 56 58.9
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-06 57.4 56 57.1
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-06 57.4 49 63.3
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 1.0e-06 57.4 49 65.3
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-06 56.6 49 65.3
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 2.3e-06 56.2 49 65.3
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-06 56.2 49 65.3
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-06 56.2 49 65.3
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-06 56.2 49 65.3
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.3e-06 56.2 61 59.0
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 2.3e-06 56.2 49 65.3
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 3.0e-06 55.8 59 54.2
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 3.0e-06 55.8 49 65.3
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 3.9e-06 55.5 49 63.3
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 3.9e-06 55.5 49 63.3
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 5.1e-06 55.1 49 63.3
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 6.7e-06 54.7 35 80.0
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 6.7e-06 54.7 49 63.3
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 6.7e-06 54.7 49 63.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 6.7e-06 54.7 49 63.3
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 6.7e-06 54.7 56 57.1
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 6.7e-06 54.7 49 63.3
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 8.7e-06 54.3 56 57.1
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 8.7e-06 54.3 49 65.3


User provided reference genes

Program Settings