Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p48500 Brassica napus HOM05D008154 ORTHO05D012553 9.2e-95 350.1 167 100.0
A01p38240 Brassica napus HOM05D008154 ORTHO05D012553 4.6e-94 347.8 167 99.4
BraA01t03880Z Brassica rapa HOM05D008154 ORTHO05D012553 1.3e-93 346.3 167 98.8
BcaC09g48565 Brassica carinata HOM05D008154 ORTHO05D012553 3.0e-93 345.1 167 98.2
BolC1t04810H Brassica oleracea HOM05D008154 ORTHO05D012553 3.0e-93 345.1 167 98.2
BcaB04g20900 Brassica carinata HOM05D008154 ORTHO05D012553 1.5e-89 332.8 167 92.8
A05p33540 Brassica napus HOM05D008154 ORTHO05D012553 2.9e-88 328.6 167 92.2
BraA05t22175Z Brassica rapa HOM05D008154 ORTHO05D012553 2.9e-88 328.6 167 92.2
Thhalv10022366m.g Eutrema salsugineum HOM05D008154 ORTHO05D012553 6.4e-88 327.4 167 91.6
BraA05t22176Z Brassica rapa HOM05D008154 ORTHO05D012553 8.3e-88 327.0 167 91.6
Sp3g14190 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.1e-87 326.6 167 94.0
AT3G15860 Arabidopsis thaliana HOM05D008154 ORTHO05D012553 3.2e-87 325.1 171 90.1
C05p50530 Brassica napus HOM05D008154 ORTHO05D012553 2.7e-86 322.0 165 89.7
BolC5t33799H Brassica oleracea HOM05D008154 ORTHO05D012553 2.3e-85 318.9 165 89.1
CARHR090960 Cardamine hirsuta HOM05D008154 ORTHO05D012553 6.2e-83 310.8 164 87.8
Carub.0003s1560 Capsella rubella HOM05D008154 ORTHO05D012553 1.2e-78 296.6 166 84.3
BcaC05g28926 Brassica carinata HOM05D008154 ORTHO05D012553 8.6e-77 290.4 165 82.4
Aa31LG8G3050 Aethionema arabicum HOM05D008154 ORTHO05D012553 8.1e-75 283.9 165 75.8
THA.LOC104810614 Tarenaya hassleriana HOM05D008154 ORTHO05D012553 1.1e-44 183.7 146 62.3
BcaB04g19751 Brassica carinata HOM05D008154 ORTHO05D012557 1.6e-30 136.7 162 46.9
THA.LOC104811313 Tarenaya hassleriana HOM05D008154 ORTHO05D012557 2.7e-30 136.0 166 45.8
BraA09t36243Z Brassica rapa HOM05D008154 ORTHO05D012557 4.7e-30 135.2 157 45.2
C09p06570 Brassica napus HOM05D008154 ORTHO05D012557 1.0e-29 134.0 157 45.2
A09p06010 Brassica napus HOM05D008154 ORTHO05D012557 1.4e-29 133.7 136 49.3
Thhalv10005491m.g Eutrema salsugineum HOM05D008154 ORTHO05D012557 2.3e-29 132.9 156 44.9
Carub.0006s2384 Capsella rubella HOM05D008154 ORTHO05D012557 6.7e-29 131.3 161 46.0
AL6G38080 Arabidopsis lyrata HOM05D008154 ORTHO05D012557 1.1e-28 130.6 136 48.5
A02p39190 Brassica napus HOM05D008154 ORTHO05D012557 1.1e-28 130.6 163 44.8
Sp2g21640 Schrenkiella parvula HOM05D008154 ORTHO05D012557 1.5e-28 130.2 156 43.6
BolC2t11938H Brassica oleracea HOM05D008154 ORTHO05D012557 2.0e-28 129.8 163 43.6
BcaC03g17839 Brassica carinata HOM05D008154 ORTHO05D012557 2.6e-28 129.4 136 47.8
C02p58790 Brassica napus HOM05D008154 ORTHO05D012557 2.6e-28 129.4 136 47.8
BraA02t08884Z Brassica rapa HOM05D008154 ORTHO05D012557 2.6e-28 129.4 163 44.2
CARHR187360 Cardamine hirsuta HOM05D008154 ORTHO05D012557 5.7e-28 128.3 163 41.7
AT5G26090 Arabidopsis thaliana HOM05D008154 ORTHO05D012557 7.4e-28 127.9 136 46.3
BcaB07g29945 Brassica carinata HOM05D008154 ORTHO05D012557 7.4e-28 127.9 135 48.1
BolC9t53583H Brassica oleracea HOM05D008154 ORTHO05D012557 1.3e-27 127.1 137 48.2
BcaB07g32008 Brassica carinata HOM05D008154 ORTHO05D012557 8.2e-27 124.4 135 47.4
Aa31LG11G5040 Aethionema arabicum HOM05D008154 ORTHO05D012557 1.8e-26 123.2 162 41.4
BcaC04g23600 Brassica carinata HOM05D008154 ORTHO05D012557 1.1e-23 114.0 158 41.1
Sp3g14170 Schrenkiella parvula HOM05D008154 ORTHO05D012553 1.5e-20 103.6 79 67.1
BcaC03g13395 Brassica carinata HOM05D008154 ORTHO05D012061 1.3e-19 100.5 159 35.8
C02p05410 Brassica napus HOM05D008154 ORTHO05D012061 1.3e-19 100.5 159 35.8
A02p01230 Brassica napus HOM05D008154 ORTHO05D012061 1.7e-19 100.1 159 35.8
BolC2t06489H Brassica oleracea HOM05D008154 ORTHO05D012061 1.7e-19 100.1 159 35.8
BraA02t05102Z Brassica rapa HOM05D008154 ORTHO05D012061 1.7e-19 100.1 159 35.8
Sp6g31770 Schrenkiella parvula HOM05D008154 ORTHO05D012061 1.1e-18 97.4 159 37.1
Thhalv10015823m.g Eutrema salsugineum HOM05D008154 ORTHO05D012061 9.1e-18 94.4 159 35.2
BcaNung02650 Brassica carinata HOM05D008154 ORTHO05D012061 1.2e-17 94.0 159 35.2
THA.LOC104810616 Tarenaya hassleriana HOM05D008154 ORTHO05D406818 5.9e-17 91.7 167 31.7
THA.LOC104799699 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 7.7e-17 91.3 161 34.2
BcaB04g19752 Brassica carinata HOM05D008154 ORTHO05D012061 2.2e-16 89.7 175 31.4
BcaC04g23599 Brassica carinata HOM05D008154 ORTHO05D012061 2.2e-16 89.7 175 32.0
C07p41900 Brassica napus HOM05D008154 ORTHO05D012061 2.9e-16 89.4 175 32.6
BolC7t44720H Brassica oleracea HOM05D008154 ORTHO05D012061 3.8e-16 89.0 175 32.6
THA.LOC104811241 Tarenaya hassleriana HOM05D008154 ORTHO05D012061 8.5e-16 87.8 163 35.0
AL6G22580 Arabidopsis lyrata HOM05D008154 ORTHO05D012061 1.5e-15 87.0 166 31.3
A06p36580 Brassica napus HOM05D008154 ORTHO05D012061 1.5e-15 87.0 174 32.2
BraA06t26584Z Brassica rapa HOM05D008154 ORTHO05D012061 1.5e-15 87.0 175 32.0
BcaNung03981 Brassica carinata HOM05D008154 ORTHO05D012061 4.2e-15 85.5 170 31.2
Carub.0006s1036 Capsella rubella HOM05D008154 ORTHO05D012061 4.2e-15 85.5 161 30.4
BcaB01g05451 Brassica carinata HOM05D008154 ORTHO05D012061 5.5e-15 85.1 161 32.9
AT5G11830 Arabidopsis thaliana HOM05D008154 ORTHO05D012061 1.2e-14 84.0 166 30.1
CARHR090950 Cardamine hirsuta HOM05D008154 ORTHO05D012553 4.7e-14 82.0 48 81.2
CARHR187350 Cardamine hirsuta HOM05D008154 ORTHO05D012061 3.0e-13 79.3 163 31.3
CARHR201330 Cardamine hirsuta HOM05D008154 ORTHO05D012061 4.0e-13 79.0 166 32.5
Sp2g21650 Schrenkiella parvula HOM05D008154 ORTHO05D012061 8.8e-13 77.8 174 29.9
BcaNung03980 Brassica carinata HOM05D008154 ORTHO05D012061 1.0e-08 64.3 123 30.1


User provided reference genes

Program Settings