Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p48280 Brassica napus HOM05D008709 ORTHO05D024458 1.4e-84 316.2 162 100.0
BolC1t04791H Brassica oleracea HOM05D008709 ORTHO05D024458 3.0e-82 308.5 162 97.5
BcaC09g48582 Brassica carinata HOM05D008709 ORTHO05D024458 6.9e-79 297.4 164 95.1
BraA01t03864Z Brassica rapa HOM05D008709 ORTHO05D024458 1.5e-70 269.6 164 88.4
A01p38070 Brassica napus HOM05D008709 ORTHO05D024458 2.7e-59 232.3 137 91.2
BolC3t17089H Brassica oleracea HOM05D008709 ORTHO05D011440 2.5e-20 102.8 158 45.6
BcaC01g01470 Brassica carinata HOM05D008709 ORTHO05D011440 7.2e-20 101.3 158 43.7
C03p92330 Brassica napus HOM05D008709 ORTHO05D011440 7.2e-20 101.3 158 43.7
BolC3t21545H Brassica oleracea HOM05D008709 ORTHO05D011440 7.2e-20 101.3 158 43.7
BraA03t13118Z Brassica rapa HOM05D008709 ORTHO05D011440 2.1e-19 99.8 158 44.3
AT2G16005 Arabidopsis thaliana HOM05D008709 ORTHO05D011440 1.8e-18 96.7 159 42.1
CARHR091160 Cardamine hirsuta HOM05D008709 ORTHO05D011440 6.8e-18 94.7 145 44.8
BcaC01g03838 Brassica carinata HOM05D008709 ORTHO05D011440 9.8e-17 90.9 132 47.0
C03p48080 Brassica napus HOM05D008709 ORTHO05D011440 9.8e-17 90.9 132 47.0
CARHR091170 Cardamine hirsuta HOM05D008709 ORTHO05D011440 8.3e-16 87.8 161 44.1
C03p48130 Brassica napus HOM05D008709 ORTHO05D011440 1.8e-15 86.7 159 39.6
BolC3t17093H Brassica oleracea HOM05D008709 ORTHO05D011440 1.8e-15 86.7 159 39.6
BcaB04g18887 Brassica carinata HOM05D008709 ORTHO05D011440 4.1e-15 85.5 132 47.0
BraA03t13112Z Brassica rapa HOM05D008709 ORTHO05D011440 7.7e-14 81.3 162 35.8
BcaB04g18876 Brassica carinata HOM05D008709 ORTHO05D011440 1.0e-13 80.9 132 43.9
BraA03t13114Z Brassica rapa HOM05D008709 ORTHO05D011440 5.5e-12 75.1 163 38.0
A03p39650 Brassica napus HOM05D008709 ORTHO05D011440 9.5e-12 74.3 164 34.1
BcaC01g03835 Brassica carinata HOM05D001353 ORTHO05D005187 1.2e-11 73.9 132 40.9
CARHR091180 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.2e-11 73.9 128 43.8
BraA09t38151Z Brassica rapa HOM05D014281 ORTHO05D027372 1.6e-11 73.6 164 37.2
Thhalv10009560m.g Eutrema salsugineum HOM05D008709 ORTHO05D011440 2.7e-11 72.8 124 41.1
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 4.7e-11 72.0 158 39.2
BcaB04g18874 Brassica carinata HOM05D008709 ORTHO05D011440 8.0e-11 71.2 158 32.9
BcaB04g18875 Brassica carinata HOM05D008709 ORTHO05D021804 1.4e-10 70.5 162 36.4
BcaB04g18877 Brassica carinata HOM05D008709 ORTHO05D011440 1.8e-10 70.1 89 46.1
C01p25000 Brassica napus HOM05D014281 ORTHO05D027372 1.2e-09 67.4 159 37.1
BolC1t02444H Brassica oleracea HOM05D014281 ORTHO05D027372 1.2e-09 67.4 159 37.1
A06p22210 Brassica napus HOM05D002139 ORTHO05D002264 2.0e-09 66.6 150 38.7
BraA06t25309Z Brassica rapa HOM05D002139 ORTHO05D002264 4.4e-09 65.5 150 38.0
BcaC01g02081 Brassica carinata HOM05D002139 ORTHO05D002264 7.5e-09 64.7 150 38.0
C03p68780 Brassica napus HOM05D002139 ORTHO05D002264 7.5e-09 64.7 150 38.0
BolC3t19132H Brassica oleracea HOM05D002139 ORTHO05D002264 7.5e-09 64.7 150 38.0
Thhalv10010794m.g Eutrema salsugineum HOM05D002139 ORTHO05D002264 9.8e-09 64.3 131 40.5
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 2.2e-08 63.2 142 37.3
A03p39690 Brassica napus HOM05D008709 ORTHO05D011440 2.8e-08 62.8 85 49.4
BraA03t13117Z Brassica rapa HOM05D008709 ORTHO05D011440 4.9e-08 62.0 85 49.4
CARHR152880 Cardamine hirsuta HOM05D002139 ORTHO05D002264 6.3e-08 61.6 150 36.0
C03p48140 Brassica napus HOM05D008709 ORTHO05D011440 8.3e-08 61.2 84 48.8
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 1.8e-07 60.1 150 39.3
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 2.4e-07 59.7 150 36.7
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 9.2e-07 57.8 150 36.0
Lalb_Chr19g0136171 Lupinus albus HOM05D002139 ORTHO05D002264 1.2e-06 57.4 157 29.9
A03p39670 Brassica napus HOM05D008709 ORTHO05D011440 1.6e-06 57.0 100 32.0
CARHR102450 Cardamine hirsuta HOM05D008709 ORTHO05D011440 1.6e-06 57.0 75 49.3
A08p19780 Brassica napus HOM05D014281 ORTHO05D040471 2.0e-06 56.6 158 35.4
BcaC06g31532 Brassica carinata HOM05D023624 ORTHO05D032369 5.9e-06 55.1 130 35.4


User provided reference genes

Program Settings